BAC Information

Click to search

BAC

Clone NameB6Ng01-321F24
Chromosome8 (Build37)
Map Location 118,074,586 - 118,240,222
singlet/doubletdoublet
Overlap geneMaf
Upstream geneWwox
Downstream geneLOC384868, LOC668233, Dynlrb2, Cdyl2
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321F24.bB6Ng01-321F24.g
ACCGA110500GA110501
length2691,068
definitionB6Ng01-321F24.b B6Ng01-321F24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,239,954 - 118,240,222)(118,074,586 - 118,075,645)
sequence
atccgcagtagtgcatgtttgttaggaagacaaatagatttctgagactc
gctggccagtcagcttagcccacttggcaagttccaagccagtgataaac
cctacaggcaattagtggggctgagagagattggattcatcttctccagg
tatgtgtcccggttcggttttccagtcccatgcatgcagtgagtcctaaa
tacatataccatatatataggaacaagaacatataggaactcgtgtgtgt
gtgtgtgtgtgtgtgtgtg
gaattccagaacttttagtatggatatttttttcccggactggccagtat
attgattatttttctagaaacacacatagtggaaggcctgcaaattatct
ggcaatcaagtctctacaaggggagggtgaaactttttttgtatagtttg
ccacttttttggagtaaatgattgcatgagtccaaacactcagtgtgaag
ccacttggactacaagacagctgaagttttgacaactggctttttcaggc
aggtgtacgccagttccagcttatttcaatgctggctccttctggctccc
tagaatcaactcttaattcatatagtgtgtcttgcattatgtacactgtt
gtgtaatatattatgttgttaaaagtctacatacatacttttaatacata
atacatatttaataaataagacatagtttaaatagataagacacaatttt
aataaataatagatagttttaatagcaaacataatcactcatgaatgttt
tatttctactaaagattatgtaataaaatatggaatcatataaatactgc
atcttaaaaggtcataaagaagaaagctgaacacctgagagagggagacc
cacttttcctgtccacaaaagcacagctttcaggaatcagaatctgagaa
gaaaaccagatccggatcctgggtgacttagtggtagcagaacagattcc
agccaagcaatgacttgttaatgatctgtgctgggtaatgagctgtagca
gcccagatccgctgcttatctgatgggctggatctctgctgggtttccag
tggagactagagcagcagtgaatgaagcgaagggctttggagattccgcc
ctctggggctgaggacctgttttggtagaagggcttgcttggcatgcagc
gaggaactatccccagggttgtataaaccaggcatcatggggcatgccta
cagtttctatcactactcagaaagtaaaaggtcagatgtacccaaagttc
aaggtcgtcgatggctaacatagggaagctatagaacaagctcgaagtac
atggaaagtctactcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_118239954_118240222
seq2: B6Ng01-321F24.b_53_321 (reverse)

seq1  CACACACACACACACACACACACACACGAGTTCCTATATGTTCTTGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACGAGTTCCTATATGTTCTTGTTCC  50

seq1  TATATATATGGTATATGTATTTAGGACTCACTGCATGCATGGGACTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATGGTATATGTATTTAGGACTCACTGCATGCATGGGACTGGAA  100

seq1  AACCGAACCGGGACACATACCTGGAGAAGATGAATCCAATCTCTCTCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGAACCGGGACACATACCTGGAGAAGATGAATCCAATCTCTCTCAGC  150

seq1  CCCACTAATTGCCTGTAGGGTTTATCACTGGCTTGGAACTTGCCAAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTAATTGCCTGTAGGGTTTATCACTGGCTTGGAACTTGCCAAGTGG  200

seq1  GCTAAGCTGACTGGCCAGCGAGTCTCAGAAATCTATTTGTCTTCCTAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGCTGACTGGCCAGCGAGTCTCAGAAATCTATTTGTCTTCCTAACA  250

seq1  AACATGCACTACTGCGGAT  269
      |||||||||||||||||||
seq2  AACATGCACTACTGCGGAT  269

seq1: chr8_118074586_118075645
seq2: B6Ng01-321F24.g_66_1133

seq1  GAATTCCAGAACTTTTAGTATGGATATTTTTTTCCCGGACTGGCCAGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAACTTTTAGTATGGATATTTTTTTCCCGGACTGGCCAGTAT  50

seq1  ATTGATTATTTTTCTAGAAACACACATAGTGGAAGGCCTGCAAATTATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTATTTTTCTAGAAACACACATAGTGGAAGGCCTGCAAATTATCT  100

seq1  GGCAATCAAGTCTCTACAAGGGGAGGGTGAAACTTTTTTTGTATAGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATCAAGTCTCTACAAGGGGAGGGTGAAACTTTTTTTGTATAGTTTG  150

seq1  CCACTTTTTTGGAGTAAATGATTGCATGAGTCCAAACACTCAGTGTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTTTTGGAGTAAATGATTGCATGAGTCCAAACACTCAGTGTGAAG  200

seq1  CCACTTGGACTACAAGACAGCTGAAGTTTTGACAACTGGCTTTTTCAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGGACTACAAGACAGCTGAAGTTTTGACAACTGGCTTTTTCAGGC  250

seq1  AGGTGTACGCCAGTTCCAGCTTATTTCAATGCTGGCTCCTTCTGGCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTACGCCAGTTCCAGCTTATTTCAATGCTGGCTCCTTCTGGCTCCC  300

seq1  TAGAATCAACTCTTAATTCATATAGTGTGTCTTGCATTATGTACACTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCAACTCTTAATTCATATAGTGTGTCTTGCATTATGTACACTGTT  350

seq1  GTGTAATATATTATGTTGTTAAAAGTCTACATACATACTTTTAATACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATATATTATGTTGTTAAAAGTCTACATACATACTTTTAATACATA  400

seq1  ATACATATTTAATAAATAAGACATAGTTTAAATAGATAAGACACAATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATTTAATAAATAAGACATAGTTTAAATAGATAAGACACAATTTT  450

seq1  AATAAATAATAGATAGTTTTAATAGCAAACATAATCACTCATGAATGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAATAGATAGTTTTAATAGCAAACATAATCACTCATGAATGTTT  500

seq1  TATTTCTACTAAAGATTATGTAATAAAATATGGAATCATATAAATACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTACTAAAGATTATGTAATAAAATATGGAATCATATAAATACTGC  550

seq1  ATCTTAAAAGGTCATAAAGAAGAAAGCTGAACACCTGAGAGAGGGAGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAAAGGTCATAAAGAAGAAAGCTGAACACCTGAGAGAGGGAGACC  600

seq1  CACTTTTCCTGTCCACAAAAGCACAGCTTTCAGGAATCAGAATCTGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTCCTGTCCACAAAAGCACAGCTTTCAGGAATCAGAATCTGAGAA  650

seq1  GAAAACCAGATCCGGATCCTGGGTGACTTAGTGGTAGCAGAACAGATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCAGATCCGGATCCTGGGTGACTTAGTGGTAGCAGAACAGATTCC  700

seq1  AGCCAAGCAATGACTTGTTAATGATCTGTGCTGGGTAATGAGCTGTAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGCAATGACTTGTTAATGATCTGTGCTGGGTAATGAGCTGTAGCA  750

seq1  GCCCAGATCCGCTGCTTATCTGATGGGCTGGATCTCTGCTGGG-TTCCAG  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCCCAGATCCGCTGCTTATCTGATGGGCTGGATCTCTGCTGGGTTTCCAG  800

seq1  TGGAGACTAGAGCAGCAGTGAATGAAGCGAAGGGCTTTGGAGATTCCGCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACTAGAGCAGCAGTGAATGAAGCGAAGGGCTTTGGAGATTCCGCC  850

seq1  CTCTGGGGCTGAGGACCTG-TTTGGTAGAAGGGCTTGCTTGGCATGCAGC  898
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCTGGGGCTGAGGACCTGTTTTGGTAGAAGGGCTTGCTTGGCATGCAGC  900

seq1  GAGGAACTATCCCCAGGGTTGTATAAACCAGGCATCATGGGGCATGCCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACTATCCCCAGGGTTGTATAAACCAGGCATCATGGGGCATGCCTA  950

seq1  CAG-TTCCATCACCACTCAGGAAGT-AAAGGTCAGA-GGACCCAAAGTTC  995
      ||| ||| ||||| |||||| |||| |||||||||| | |||||||||||
seq2  CAGTTTCTATCACTACTCAGAAAGTAAAAGGTCAGATGTACCCAAAGTTC  1000

seq1  AAGGTCGTCGATGG-TTACATAGGG-AGCTATAG-ACAAGCTCGAAGTAC  1042
      |||||||||||||| | |||||||| |||||||| |||||||||||||||
seq2  AAGGTCGTCGATGGCTAACATAGGGAAGCTATAGAACAAGCTCGAAGTAC  1050

seq1  AT-GAGAGTCTATCTCATA  1060
      || || |||||| ||||||
seq2  ATGGAAAGTCTA-CTCATA  1068