MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-321P09
Chromosome	8 (Build37)
Map Location	80,905,179 - 81,020,656
singlet/doublet	doublet
Overlap gene	Ttc29, Pou4f2, LOC100039422
Upstream gene	Arhgap10, LOC100039235, AI931714, Tmem34, Ednra, EG622803
Downstream gene	Rbmxrt, Slc10a7, LOC100039466, Lsm6, EG666340, EG666346, D630040G17Rik, 1700011L22Rik, Mmaa, A630049P17, Smad1, LOC666378, LOC666388
Link	Open Mouse BAC browser

Click to get alignment info.

name	Arhgap10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78514 MGI:1925764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039235 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	AI931714 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102182 MGI:2142651
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem34 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234463 MGI:2384562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ednra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13617 MGI:105923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622803 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622803 MGI:3643019
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ttc29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73301 MGI:1920551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pou4f2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18997 MGI:102524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039422 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 841 ESTs

name	Rbmxrt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19656 MGI:1343045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc10a7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76775 MGI:1924025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039466 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Lsm6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78651 MGI:1925901
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666340 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666340 MGI:3643693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1040 ESTs, 4 Proteins

name	EG666346 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666346 MGI:3643698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	D630040G17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622675 MGI:2444807
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700011L22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67687 MGI:1914937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein

name	Mmaa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109136 MGI:1923805
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630049P17 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:234479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Smad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17125 MGI:109452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC666388 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Arhgap10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116174785 GeneID:78514 MGI:1925764
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 10 transcript_id : NM_030113.2

name	LOC100039235 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258939 GeneID:100039235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100039235 transcript_id : XM_001472504.1

name	AI931714 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778995 GeneID:102182 MGI:2142651
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI931714 transcript_id : NM_001081240.3

name	Tmem34 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364349 GeneID:234463 MGI:2384562
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 34 transcript_id : NM_145599.3

name	Ednra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102407 GeneID:13617 MGI:105923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endothelin receptor type A transcript_id : NM_010332.2

name	EG622803 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383685 GeneID:622803 MGI:3643019
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG622803 transcript_id : XM_897327.2

name	Ttc29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328520 GeneID:73301 MGI:1920551
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 29 transcript_id : NM_183096.2

name	Pou4f2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059066 GeneID:18997 MGI:102524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 4, transcription factor 2 transcript_id : NM_138944.2

name	LOC100039422 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258949 GeneID:100039422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 564 ESTs product : similar to ribosomal protein S25, transcript variant 2 transcript_id : XM_001472951.1

name	LOC100039422 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258947 GeneID:100039422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 840 ESTs product : similar to ribosomal protein S25, transcript variant 1 transcript_id : XM_001472932.1

name	Rbmxrt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83699419 GeneID:19656 MGI:1343045
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein, X chromosome retrogene transcript_id : NM_009033.2

name	Slc10a7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113199772 GeneID:76775 MGI:1924025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 10 (sodium/bile acid cotransporter family), member 7 transcript_id : NM_029736.1

name	Lsm6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802913 GeneID:78651 MGI:1925901
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) transcript_id : NM_030145.2

name	EG666340 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258951 GeneID:666340 MGI:3643693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1040 ESTs, 4 Proteins product : predicted gene, EG666340 transcript_id : XM_983151.2

name	D630040G17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124358943 GeneID:622675 MGI:2444807
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D630040G17 gene transcript_id : NM_178267.3

name	1700011L22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383663 GeneID:67687 MGI:1914937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein product : RIKEN cDNA 1700011L22 gene, transcript variant 1 transcript_id : XM_134463.3

name	Mmaa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383676 GeneID:109136 MGI:1923805
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methylmalonic aciduria (cobalamin deficiency) type A transcript_id : NM_133823.3

name	A630049P17 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258945 GeneID:234479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein A630049P17 transcript_id : XM_001472774.1

name	Smad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476186 GeneID:17125 MGI:109452
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 1 (Drosophila) transcript_id : NM_008539.3

name	Arhgap10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116174786 CCDS:CCDS22425.1 GeneID:78514 MGI:1925764
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IDA]; GO:0005100 - Rho GTPase activator activity [Evidence IDA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Rho GTPase activating protein 10 protein_id : NP_084389.2

name	LOC100039235 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258940 GeneID:100039235
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472554.1

name	AI931714 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486973 GeneID:102182 MGI:2142651
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006479 - protein amino acid methylation [Evidence IEA] codon_start : 1 product : hypothetical protein LOC102182 protein_id : NP_001074709.1

name	Tmem34 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734467 CCDS:CCDS22426.1 GeneID:234463 MGI:2384562
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : transmembrane protein 34 protein_id : NP_663574.2

name	Ednra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:45383740 CCDS:CCDS22427.1 GeneID:13617 MGI:105923
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004962 - endothelin receptor activity [Evidence IMP]; GO:0001599 - endothelin-A receptor activity [Evidence ISS]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA] [Evidence TAS]; GO:0004435 - phosphoinositide phospholipase C activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0004713 - protein-tyrosine kinase activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence ISS]; GO:0008217 - blood pressure regulation [Evidence IMP]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0007204 - elevation of cytosolic calcium ion concentration [Evidence ISS]; GO:0001701 - embryonic development (sensu Mammalia) [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence TAS] [Evidence IEA]; GO:0015758 - glucose transport [Evidence IDA]; GO:0007507 - heart development [Evidence IGI]; GO:0030818 - negative regulation of cAMP biosynthesis [Evidence IGI]; GO:0014032 - neural crest cell development [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IGI]; GO:0007202 - phospholipase C activation [Evidence ISS]; GO:0007585 - respiratory gaseous exchange [Evidence IMP]; GO:0001666 - response to hypoxia [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006939 - smooth muscle contraction [Evidence ISS]; GO:0042310 - vasoconstriction [Evidence IMP] codon_start : 1 note : G-protein coupled receptor 10 product : endothelin receptor type A protein_id : NP_034462.1

name	EG622803 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918015 GeneID:622803 MGI:3643019
definition	codon_start : 1 product : hypothetical protein protein_id : XP_902420.1

name	Ttc29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328521 CCDS:CCDS22428.1 GeneID:73301 MGI:1920551
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : NYD-SP14 protein protein_id : NP_898919.2

name	Pou4f2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059067 CCDS:CCDS22429.1 GeneID:18997 MGI:102524
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] [Evidence TAS] [Evidence ISS] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007409 - axonogenesis [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] [Evidence TAS]; GO:0002073 - retina development (sensu Mammalia) [Evidence IMP] codon_start : 1 note : POU domain, class 4, transcription factor, related sequence 1 product : POU domain, class 4, transcription factor 2 protein_id : NP_620394.2

name	LOC100039422 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258948 GeneID:100039422
definition	codon_start : 1 product : similar to ribosomal protein S25 isoform 1 protein_id : XP_001472982.1

name	LOC100039422 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258950 GeneID:100039422
definition	codon_start : 1 product : similar to ribosomal protein S25 isoform 2 protein_id : XP_001473001.1

name	Rbmxrt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83699420 CCDS:CCDS22430.1 GeneID:19656 MGI:1343045
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IDA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : hnRNP G product : RNA binding motif protein, X chromosome retrogene protein_id : NP_033059.2

name	Slc10a7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113199773 GeneID:76775 MGI:1924025
definition	codon_start : 1 product : solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein_id : NP_084012.1

name	Lsm6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865835 GeneID:78651 MGI:1925901
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0046982 - protein heterodimerization activity [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006402 - mRNA catabolism [Evidence ISS]; GO:0016071 - mRNA metabolism [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : LSM6 homolog, U6 small nuclear RNA associated protein_id : NP_084421.1

name	EG666340 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383687 GeneID:666340 MGI:3643693
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988245.1

name	D630040G17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124358944 GeneID:622675 MGI:2444807
definition	codon_start : 1 product : hypothetical protein LOC622675 protein_id : NP_839998.2

name	1700011L22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20885420 GeneID:67687 MGI:1914937
definition	codon_start : 1 product : hypothetical protein LOC67687 isoform 1 protein_id : XP_134463.1

name	Mmaa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541923 CCDS:CCDS22436.1 GeneID:109136 MGI:1923805
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] codon_start : 1 product : methylmalonic aciduria type A protein_id : NP_598584.2

name	A630049P17 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258946 GeneID:234479
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472824.1

name	Smad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543220 CCDS:CCDS22437.1 GeneID:17125 MGI:109452
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] [Evidence ISS]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005057 - receptor signaling protein activity [Evidence ISS]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0030509 - BMP signaling pathway [Evidence IMP] [Evidence ISS] [Evidence TAS]; GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence ISS]; GO:0007276 - gametogenesis [Evidence IMP]; GO:0030902 - hindbrain development [Evidence IMP]; GO:0042592 - homeostasis [Evidence IMP]; GO:0000165 - MAPKKK cascade [Evidence IMP]; GO:0030901 - midbrain development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] codon_start : 1 note : Smad 1 product : MAD homolog 1 protein_id : NP_032565.2

name	LOC100039466 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039466
definition	number : 1 pseudo : _no_value

name	EG666346 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666346
definition	number : 3 pseudo : _no_value

name	EG666346 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666346
definition	number : 2 pseudo : _no_value

name	EG666346 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666346
definition	number : 1 pseudo : _no_value

name	LOC666378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666378
definition	number : 1 pseudo : _no_value

name	LOC666388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666388
definition	number : 3 pseudo : _no_value

clone name	MSMg01-501M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139K04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-398P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531M04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-448H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332D14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-442P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344L20
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-321P09.b	B6Ng01-321P09.g
ACC	GA110932	GA110933
length	1,007	1,138
definition	B6Ng01-321P09.b	B6Ng01-321P09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(81,019,654 - 81,020,656)	(80,905,179 - 80,906,327)
sequence	gaattctgttttgtttctgatttcaactttttgagttctattgcattatt cttcccttcagttctaaggttctaagaacagtcctgattgatacacatat attataacagaataaagataatttgttccttgcatttgatcaacacactg atggaacactggctacagcaaagtcaggaaatgttatgttgctgctcttt aactttagagtttatagaggctggaagtctcctgagtttagcatgtattc taagggtttcatttgatagtcatgagaatgctgagtcagctagctaaaaa ggataaaagttgggacttagaaagatagttccagggctggagagatggct cagtagtaagagcaccgactgctcttccgaaggtcctgagttcaaatccc agcaaccacatggtagctcacaaccatctgtaatgagatctgacgccctc ttctggtgcatctgaagacagctacagtgtacttagatataataataaat aagtctttttttaagaaaagaaaaaagaaaataagaaagatagttccagt ggataagagcactgactgtacttctagaggtcctgagttcaatcccctac aaccacatggtggctgtgatggtttgtatagtcttggactagggagtggc accatttggaagagtgaccttgttggaatagatgtgacctggttggagtg ggtgtgtcactgtgagtgtgggcataagaccctcatcctagttgcctgga agtcagtctttccacgagcagcctttggatgaagatgtagaactctcagc tcctcctgcaccatgtctgcctggatgctgccatgcttccaccttgatgg taatggactgaacctctgaacctgtaagccagccccaattaaatgtggtt tttttccccgcccctaaatgtttttttataggacttgctttgggttcatg atgtctgtttaaagcagtaaaacccctaactaatacagttgcttcacaac ctattct	gaattcaacaattaaggaacagttaggacccaaataagcttgttggcagc tcttcgtgccacaaagtcaaataaatcaacctggctaaacccaactcacc ttagctatgacgtctcactctcctttggagggttcatcggtgtgacatga agaatagctgtgaacataggtgtgaatctccaacaagtctttcatcagcc atgtgaggcttgaagaagttagtgttaccactggccttcctgtgttcctc gtctataaacaaatgacccctgtaggggctgagaggtttaaagaaaatgc tagctgcattcctacaacaacatatgttcttggtgcggggaaacacttca ttatcgcctacattctcaaagcatcgtgggactcctacatatactgccgt gccttttcctgaacacactgttctcccccagtgttaagcagttgagagca aggttgtgcaaaataatgattcccaagcatgaagttgcccactgactgtc ttaggatcctgtcctgattgctgcatcaaaattgggctctgagaatttgc tgtttgtttgtttgtttgtttgtttgttttcaatgaggtctagtagatcc ccagctaaccttgaatgtcaacaagacgactttcaactcccgtgcctttt gagcccacctcccaagtgctgggactgcaggtgtgcccctcggtgcgtga ttactgtggggcttcatgtaccctaggcaggcattctgtcaactgagcta catctcctggcctgaactgctgcagctaaaaagctccctaaaaagctcca gataaaatgaggctgcctgtttggaggccgcactttagatcagccgttct caacctgctgtgacccttttggaggtcggacagccatctcctaggagtcg cctaaggccatcagaaaacagatatttacattagattcataacaaaatta cagttattgagagcacaggaatgtttgtggttgggggtcacacaacatga gaacttgtattaagagtcacagcataggaaggctgagaaccgctgcttta gaggtgaagatatattgcattgcctggaacatgttttttataagtaagta tatttcttatcacaggcatgctacatgacctcattcgt
quality values	Open. Hide. 58 36 18 32 58 58 42 36 58 58 58 58 47 62 62 62 62 47 47 62 47 62 62 31 16 49 62 62 62 62 51 39 22 32 27 34 50 50 24 44 38 49 38 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 59 56 59 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 42 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 62 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 43 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 47 62 62 62 62 33 62 62 62 62 62 62 62 62 62 42 62 58 58 52 58 52 58 58 58 58 58 58 58 58 58 52 58 58 49 58 54 47 58 58 58 52 47 54 58 54 52 54 54 58 58 54 40 26 54 54 52 58 58 49 41 54 58 45 52 40 40 54 34 54 54 58 54 45 58 58 29 58 30 49 58 40 33 58 54 37 42 54 46 52 54 58 37 33 53 50 53 46 53 51 58 40 52 54 51 58 40 51 41 42 50 45 32 53 58 32 43 50 51 52 52 50 37 28 24 43 52 47 49 51 25 28 50 32 52 58 54 46 39 46 31 49 22 50 18 58 58 50 50 40 41 32 51 35 31 29 52 48 41 51 46 28 30 28 43 50 35 39 39 42 39 32 42 32 58 18 39 26 29 32 33 51 32 50 40 33 41 49 26 51 29 24 49 41 31 36 44 35 25 41 28 33 28 37 17 39 39 17 46 33 45 39 32 22 44 12 27 39 35 29 52 42 38 32 24 30 51 25 30 53 30 53 27 36 27 54 26 53 51 22 21 32 53 42 26 12 30 28 24 31 27 33 52 42 32 26 18 27 25 33 35 45 18 10 46 9 12 9 18 35 21 42 31 32 33 25 32 32 34 32 45 28 31 20 28 30 33 30 51 27 21 20 19 28 28 18 29 32 37 37 32 8 25 33 51 24 45 13 17 45 22 37 11 6 46 46 41 48 46 30 18 46 41 35 30 29 42 46 29 9 21 37 27 24 32 23 42 42 42 46 46 21 31 16 25 9 9 19 26 13 33 30 21 23 36 31 25 19 6 6 7 12 12 21 20 27 15 22 27 32 30 44 20 31 33 11 31 22 22 16 25 8 7 6 36 35 18 11 30 31 12 10 16 18 24 10 12 5 8 13 11 7 7 5 7 17 5 14 19 31 8 9 8 34 11 34 9 8 8 8 15 6	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr8_81019654_81020656
seq2: B6Ng01-321P09.b_46_1052 (reverse)

seq1  AGAATAGATGGTTGTG-AGCCACTGTATTAGTTA-GGGTTTTACTGCTTT  48
      ||||||   ||||||| ||| ||||||||||||| |||||||||||||||
seq2  AGAATA---GGTTGTGAAGCAACTGTATTAGTTAGGGGTTTTACTGCTTT  47

seq1  AAACAGACATCATGA--CCAAAGCAAGTCTTAT-AAAAAACATTTAGGGG  95
      |||||||||||||||  |||||||||||| ||| ||||||||||||||||
seq2  AAACAGACATCATGAACCCAAAGCAAGTCCTATAAAAAAACATTTAGGGG  97

seq1  CGGGG-AAAAAACCACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTT  144
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAAAAAAACCACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTT  147

seq1  CAGTCCATTACCATCAAGGTGGAAGCATGGCAGCATCCAGGCAGACATGG  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCATTACCATCAAGGTGGAAGCATGGCAGCATCCAGGCAGACATGG  197

seq1  TGCAGGAGGAGCTGAGAGTTCTACATCTTCATCCAAAGGCTGCTCGTGG-  243
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGCAGGAGGAGCTGAGAGTTCTACATCTTCATCCAAAGGCTGCTCGTGGA  247

seq1  AAGACTGACTTCCAGGCAACTAGGATGAGGGTCTTATGCCCACACTCACA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGACTTCCAGGCAACTAGGATGAGGGTCTTATGCCCACACTCACA  297

seq1  GTGACACACCCACTCCAACCAGGTCACATCTATTCCAACAAGGTCACTCT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACACCCACTCCAACCAGGTCACATCTATTCCAACAAGGTCACTCT  347

seq1  TCCAAATGGTGCCACTCCCTAGTCCAAGACTATACAAACCATCACAGCCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAATGGTGCCACTCCCTAGTCCAAGACTATACAAACCATCACAGCCA  397

seq1  CCATGTGGTTGTAGGGGATTGAACTCAGGACCTCTAGAAGTACAGTCAGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGTTGTAGGGGATTGAACTCAGGACCTCTAGAAGTACAGTCAGT  447

seq1  GCTCTTATCCACTGGAACTATCTTTCTTATTTTCTTTTTTCTTTTCTTAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTATCCACTGGAACTATCTTTCTTATTTTCTTTTTTCTTTTCTTAA  497

seq1  AAAAAGACTTATTTATTATTATATCTAAGTACACTGTAGCTGTCTTCAGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACTTATTTATTATTATATCTAAGTACACTGTAGCTGTCTTCAGA  547

seq1  TGCACCAGAAGAGGGCGTCAGATCTCATTACAGATGGTTGTGAGCTACCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCAGAAGAGGGCGTCAGATCTCATTACAGATGGTTGTGAGCTACCA  597

seq1  TGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGGTGCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGCTGGGATTTGAACTCAGGACCTTCGGAAGAGCAGTCGGTGCT  647

seq1  CTTACTACTGAGCCATCTCTCCAGCCCTGGAACTATCTTTCTAAGTCCCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTACTGAGCCATCTCTCCAGCCCTGGAACTATCTTTCTAAGTCCCA  697

seq1  ACTTTTATCCTTTTTAGCTAGCTGACTCAGCATTCTCATGACTATCAAAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATCCTTTTTAGCTAGCTGACTCAGCATTCTCATGACTATCAAAT  747

seq1  GAAACCCTTAGAATACATGCTAAACTCAGGAGACTTCCAGCCTCTATAAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTTAGAATACATGCTAAACTCAGGAGACTTCCAGCCTCTATAAA  797

seq1  CTCTAAAGTTAAAGAGCAGCAACATAACATTTCCTGACTTTGCTGTAGCC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGTTAAAGAGCAGCAACATAACATTTCCTGACTTTGCTGTAGCC  847

seq1  AGTGTTCCATCAGTGTGTTGATCAAATGCAAGGAACAAATTATCTTTATT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCCATCAGTGTGTTGATCAAATGCAAGGAACAAATTATCTTTATT  897

seq1  CTGTTATAATATATGTGTATCAATCAGGACTGTTCTTAGAACCTTAGAAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATAATATATGTGTATCAATCAGGACTGTTCTTAGAACCTTAGAAC  947

seq1  TGAAGGGAAGAATAATGCAATAGAACTCAAAAAGTTGAAATCAGAAACAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGAAGAATAATGCAATAGAACTCAAAAAGTTGAAATCAGAAACAA  997

seq1  AACAGAATTC  1003
      ||||||||||
seq2  AACAGAATTC  1007

seq1: chr8_80905179_80906327
seq2: B6Ng01-321P09.g_67_1204

seq1  GAATTCAACAATTAAGGAACAGTTAGGACCCAAATAAGCTTGTTGGCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAATTAAGGAACAGTTAGGACCCAAATAAGCTTGTTGGCAGC  50

seq1  TCTTCGTGCCACAAAGTCAAATAAATCAACCTGGCTAAACCCAACTCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCGTGCCACAAAGTCAAATAAATCAACCTGGCTAAACCCAACTCACC  100

seq1  TTAGCTATGACGTCTCACTCTCCTTTGGAGGGTTCATCGGTGTGACATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTATGACGTCTCACTCTCCTTTGGAGGGTTCATCGGTGTGACATGA  150

seq1  AGAATAGCTGTGAACATAGGTGTGAATCTCCAACAAGTCTTTCATCAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGCTGTGAACATAGGTGTGAATCTCCAACAAGTCTTTCATCAGCC  200

seq1  ATGTGAGGCTTGAAGAAGTTAGTGTTACCACTGGCCTTCCTGTGTTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGGCTTGAAGAAGTTAGTGTTACCACTGGCCTTCCTGTGTTCCTC  250

seq1  GTCTATAAACAAATGACCCCTGTAGGGGCTGAGAGGTTTAAAGAAAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATAAACAAATGACCCCTGTAGGGGCTGAGAGGTTTAAAGAAAATGC  300

seq1  TAGCTGCATTCCTACAACAACATATGTTCTTGGTGCGGGGAAACACTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCATTCCTACAACAACATATGTTCTTGGTGCGGGGAAACACTTCA  350

seq1  TTATCGCCTACATTCTCAAAGCATCGTGGGACTCCTACATATACTGCCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCGCCTACATTCTCAAAGCATCGTGGGACTCCTACATATACTGCCGT  400

seq1  GCCTTTTCCTGAACACACTGTTCTCCCCCAGTGTTAAGCAGTTGAGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTCCTGAACACACTGTTCTCCCCCAGTGTTAAGCAGTTGAGAGCA  450

seq1  AGGTTGTGCAAAATAATGATTCCCAAGCATGAAGTTGCCCACTGACTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTGCAAAATAATGATTCCCAAGCATGAAGTTGCCCACTGACTGTC  500

seq1  TTAGGATCCTGTCCTGATTGCTGCATCAAAATTGGGCTCTGAGAATTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATCCTGTCCTGATTGCTGCATCAAAATTGGGCTCTGAGAATTTGC  550

seq1  TGTTTGTTTGTTTGTTTGTTTGTTTGTTTTCAATGAGGTCTAGTAGATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTTTGTTTGTTTGTTTTCAATGAGGTCTAGTAGATCC  600

seq1  CCAGCTAACCTTGAATGTCAACAAGACGACTTTCAACTCCCGTGCCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTAACCTTGAATGTCAACAAGACGACTTTCAACTCCCGTGCCTTTT  650

seq1  GAGCCCACCTCCCAAGTGCTGGGACTGCAGGTGTGCCCCTCGGTGCGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCACCTCCCAAGTGCTGGGACTGCAGGTGTGCCCCTCGGTGCGTGA  700

seq1  TTACTGTGGGGCTTCATGTACCCTAGGCAGGCATTCTGTCAACTGAGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTGGGGCTTCATGTACCCTAGGCAGGCATTCTGTCAACTGAGCTA  750

seq1  CATCTCCTGGCCTGAACTGCTGCAGCTAAAAAGCTCCCTAAAAAGCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCTGGCCTGAACTGCTGCAGCTAAAAAGCTCCCTAAAAAGCTCCA  800

seq1  GATAAAATGAGGCTGCCTGTTTGGAGGCCGCACTTTAGATCAGCCGTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATGAGGCTGCCTGTTTGGAGGCCGCACTTTAGATCAGCCGTTCT  850

seq1  CAACCTGCTGTGACCCTTTTGGAGGTCGGACAGCCATCTCCTAGGAGTCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGCTGTGACCCTTTTGGAGGTCGGACAGCCATCTCCTAGGAGTCG  900

seq1  CCTAAGGCCATCAGAAAACAGATATTTACATTAGGATTCATAACAAAATT  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCTAAGGCCATCAGAAAACAGATATTTACATTA-GATTCATAACAAAATT  949

seq1  ACAGTTATGAGGAGCAACAAGAATGTTTTGTGGTTGGGGGTCACCACAAC  1000
      ||||||||   |||| ||| ||||| ||||||||||||||||| ||||||
seq2  ACAGTTATTGAGAGC-ACAGGAATG-TTTGTGGTTGGGGGTCA-CACAAC  996

seq1  ATGAGAAC-TGTATTAAAGAGTCACAGCATTAGGAAGGCTGAGAACCGCT  1049
      |||||||| |||||| ||||||||||||| ||||||||||||||||||||
seq2  ATGAGAACTTGTATT-AAGAGTCACAGCA-TAGGAAGGCTGAGAACCGCT  1044

seq1  GCTTTAGA-GTGAAGATAATATGCATTGCCTGGACAATGTTTTTTTATAA  1098
      |||||||| |||||||||   |||||||||||||  ||| ||||||||||
seq2  GCTTTAGAGGTGAAGATATATTGCATTGCCTGGAACATG-TTTTTTATAA  1093

seq1  TTTAAATTATAATTTCTTATCACAGGCATTGCTTTACATGGACTCATTCG  1148
       |  || ||| ||||||||||||||||| |||  ||||||  ||||||||
seq2  GT--AAGTAT-ATTTCTTATCACAGGCA-TGC--TACATGACCTCATTCG  1137

seq1  T  1149
      |
seq2  T  1138

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information