BAC Information

Click to search

BAC

Clone NameB6Ng01-322N01
Chromosome8 (Build37)
Map Location 29,594,089 - 29,594,913
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1698, EG666422, LOC666430
Downstream geneEG666446, LOC100042598, Unc5d, LOC100041237
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-322N01.bB6Ng01-322N01.g
ACCGA111560GA111561
length202825
definitionB6Ng01-322N01.b B6Ng01-322N01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cattctcaatctaacacagttataagtaggaaggtgtattttgaaaatta
agtgggggtaatggtatctctagctgcatatgtagcagaagatggcctcc
tcggacatcattgggaagagaggctccttggtcttgcaaactttatatgc
cgcagtacagggtaacaccagggcctagaagtgggagtgggtgggtaggg
ga

gaattctctgtaggttacagaaagacacacaacacagaagtcactcaaac
tcagttttctttgcagttcacctgtttttcaagtaaaacaaacatctttg
gtgcaacgaaaacctaccccataactaggtagaatgagacatttttgaag
aatggccttccacggtctatactattctgctgggttagatacagagtaaa
gataaggaattcaggataaagctatcatagggactcaagagtagcagaaa
tagttatcaaatgattttgcatagctttgtctgtgactggcatggcacat
gtctgcaaccccagaactcaggaggctaaggcaggagatcaaagatgact
tgaggtaactgtgttacgacagcataagtgacatagcaagaccacacctc
caaaattggccatgtgaaaactgtacccaaaaaatagtgttcgatttaat
gggttttctcactgtaaatattattaaaaagctgccagtaaaagtctgaa
taaagatggtaaaagtattttgtcaataagctaatgaatgttaaatctat
ataaaacagaaaacaaaagaactaatagttttgttcaaaacaatgaagga
gctagagaaagtacccaaggagctaaagggacctgcaaccttatagatgg
aacaacattatgaactaaccagtaccccggagctcttgactctagctaca
tatgtatcaaaagatggcctagtccgccatcactggaaagagaggcccat
tggacaaataaactttatatgccccagtacaggggaacgccagggacaaa
aaaatgggaatgggtgggtatggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_29594089_29594913
seq2: B6Ng01-322N01.g_69_893

seq1  GAATTCTCTGTAGGTTACAGAAAGACACACAACACAGAAGTCACTCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTAGGTTACAGAAAGACACACAACACAGAAGTCACTCAAAC  50

seq1  TCAGTTTTCTTTGCAGTTCACCTGTTTTTCAAGTAAAACAAACATCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTCTTTGCAGTTCACCTGTTTTTCAAGTAAAACAAACATCTTTG  100

seq1  GTGCAACGAAAACCTACCCCATAACTAGGTAGAATGAGACATTTTTGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAACGAAAACCTACCCCATAACTAGGTAGAATGAGACATTTTTGAAG  150

seq1  AATGGCCTTCCACGGTCTATACTATTCTGCTGGGTTAGATACAGAGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCTTCCACGGTCTATACTATTCTGCTGGGTTAGATACAGAGTAAA  200

seq1  GATAAGGAATTCAGGATAAAGCTATCATAGGGACTCAAGAGTAGCAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGGAATTCAGGATAAAGCTATCATAGGGACTCAAGAGTAGCAGAAA  250

seq1  TAGTTATCAAATGATTTTGCATAGCTTTGTCTGTGACTGGCATGGCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATCAAATGATTTTGCATAGCTTTGTCTGTGACTGGCATGGCACAT  300

seq1  GTCTGCAACCCCAGAACTCAGGAGGCTAAGGCAGGAGATCAAAGATGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCAACCCCAGAACTCAGGAGGCTAAGGCAGGAGATCAAAGATGACT  350

seq1  TGAGGTAACTGTGTTACGACAGCATAAGTGACATAGCAAGACCACACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAACTGTGTTACGACAGCATAAGTGACATAGCAAGACCACACCTC  400

seq1  CAAAATTGGCCATGTGAAAACTGTACCCAAAAAATAGTGTTCGATTTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGGCCATGTGAAAACTGTACCCAAAAAATAGTGTTCGATTTAAT  450

seq1  GGGTTTTCTCACTGTAAATATTATTAAAAAGCTGCCAGTAAAAGTCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTCTCACTGTAAATATTATTAAAAAGCTGCCAGTAAAAGTCTGAA  500

seq1  TAAAGATGGTAAAAGTATTTTGTCAATAAGCTAATGAATGTTAAATCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATGGTAAAAGTATTTTGTCAATAAGCTAATGAATGTTAAATCTAT  550

seq1  ATAAAACAGAAAACAAAAGAACTAATAGTTTTGTTCAAAACAATGAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACAGAAAACAAAAGAACTAATAGTTTTGTTCAAAACAATGAAGGA  600

seq1  GCTAGAGAAAGTACCCAAGGAGCTAAAGGGACCTGCAACCTTATAGATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGAAAGTACCCAAGGAGCTAAAGGGACCTGCAACCTTATAGATGG  650

seq1  AACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTACA  700

seq1  TATGTATCAAAAGATGGCCTAGTCCGCCATCACTGGAAAGAGAGGCCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCAAAAGATGGCCTAGTCCGCCATCACTGGAAAGAGAGGCCCAT  750

seq1  TGGACAAATAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAATAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGACAAA  800

seq1  AAAATGGGAATGGGTGGGTATGGAA  825
      |||||||||||||||||||||||||
seq2  AAAATGGGAATGGGTGGGTATGGAA  825


| Home | SequenceCutter | Blast | Download |