BAC Information

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BAC

Clone NameB6Ng01-323J13
Chromosome8 (Build37)
Map Location 19,368,124 - 19,369,159
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040466, Mcph1, Angpt2, Agpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34, EG546038, Spag11, Defb14, Defb4, EG654452, Defb6, EG574081, Defb5, Defb3, Defb54-ps, LOC100040504
Downstream geneLOC100040514, Defb8, LOC100040528, LOC100041511, Defb7, LOC670326, LOC100040561, LOC624198, EG665730, 4930467E23Rik, LOC100041567, LOC547150, LOC100040599, EG665822, 6820431F20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323J13.bB6Ng01-323J13.g
ACCGA112133GA112134
length1,0341,188
definitionB6Ng01-323J13.b B6Ng01-323J13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcatggaatcagtctagccttgtcatgcagccccttttctcc
tccaagacactcccacacccccacatgcacacacagccccccatacacct
gttctggccccttcatatataaaaggagttgccatcaatatatcaggtat
agaggacacgaggcaatgtgtcctcctgtatgtgtgaagggtgaggtatt
aattcctcctaggtttcagtgcaaggctgggagagggagtggttagaatt
tggtcaaggaaaaggaatgaaattattaagaggcaggcatgattggaaga
tgagtacggagtcttctattgttgctacctgaagacaaagaacgctggag
gacagtatagaatgtaagtctctataatttgggtgctatgacagagaatg
aaaagaatagatggttataagtgacccaaacgttagttttttagattctc
aaataaggagttcagtggttgctaaggtaagaagacaaagtgctcatggt
tggagtaattggtagtcccaaagtggtgaccagatgagtggagagttgga
ctttagaatatgagaccttgttgctttgactgaacaggaaatttagaaga
gcagaggtgtcaccttggctaatttttagaatggggatgtcagagaagaa
ttttgtctagataatggacaatcacagatttagagagacatagagaaatt
aagtcagaagccagaacctggccaaattgatatgggctgtcctggaatcc
ccgatgtagtacagtccaggtgcgcttagaaactgggcatcagtgtcagt
ccaggtaaacccaaaggtgttctgggactggagagaaaatgatacatcct
tgggatctaagaaggagaaatgagaagtccccaagggcatagtggaaagg
gactgtataatggattacccacaaaaggatggagaggaaccaccattaaa
tttatgcacctgaggtctgaaaagtgataggtccattaagtccctaactt
ctaatataggggagttaaagggagggtagaagtc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggcaaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttatacaaccattctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
ctatatccagatgatgtcccaacaggtaagaagaacacatgctccactat
gttcatagcagcattgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatttggacatttacacaatgg
aatattactcagctattaaaaaaatgaatttatgaaattcctaggcaaat
tgatggacctggagggtatcatcctgagttaagtaacccaatcacaaagg
aactcgcacaatatgtgctcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaacttgccaaacgcatgaaattcaaga
agaacgaagaccaaggtgtggacactttaccctttcttagaaatgggaac
aaaacacccatagaaggagttacagagacaaaatttggagctgtgacgaa
aggatggaccatctagtgattgccatatgcagggatccatcccataatca
gcttccaaatgctgacaccattgcatacaccagcaagatttcgctgaaag
gacccagatatagctctctcttgtgagactatgcccgggcctagcaaaca
cagaagtggatgatcacagtcagctattggatgggtcacacggcccctaa
tggaggagctagagaaattacccaagagctaaagggaactgcaaccctat
aggtggaacaacatatgaactaaccagtacctggagctcttgtcttagct
gcaatatgtatcaaagaatgactagtcgcatcactgccaaagaaagagcc
ccaatggacctggcaactttataattgcccagttcaggcatgcatgccaa
atgggattgtgtgggttataggggattcgcactctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_19368124_19369159
seq2: B6Ng01-323J13.b_44_1077

seq1  GAATTCTGTCATGGAATCAGTCTAGCCTTGTCATGCAGCCCCTTTTCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCATGGAATCAGTCTAGCCTTGTCATGCAGCCCCTTTTCTCC  50

seq1  TCCAAGACACTCCCACACCCCCACATGCACACACAGCCCCCCATACACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGACACTCCCACACCCCCACATGCACACACAGCCCCCCATACACCT  100

seq1  GTTCTGGCCCCTTCATATATAAAAGGAGTTGCCATCAATATATCAGGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGCCCCTTCATATATAAAAGGAGTTGCCATCAATATATCAGGTAT  150

seq1  AGAGGACACGAGGCAATGTGTCCTCCTGTATGTGTGAAGGGTGAGGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACACGAGGCAATGTGTCCTCCTGTATGTGTGAAGGGTGAGGTATT  200

seq1  AATTCCTCCTAGGTTTCAGTGCAAGGCTGGGAGAGGGAGTGGTTAGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTCCTAGGTTTCAGTGCAAGGCTGGGAGAGGGAGTGGTTAGAATT  250

seq1  TGGTCAAGGAAAAGGAATGAAATTATTAAGAGGCAGGCATGATTGGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAAGGAAAAGGAATGAAATTATTAAGAGGCAGGCATGATTGGAAGA  300

seq1  TGAGTACGGAGTCTTCTATTGTTGCTACCTGAAGACAAAGAACGCTGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACGGAGTCTTCTATTGTTGCTACCTGAAGACAAAGAACGCTGGAG  350

seq1  GACAGTATAGAATGTAAGTCTCTATAATTTGGGTGCTATGACAGAGAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTATAGAATGTAAGTCTCTATAATTTGGGTGCTATGACAGAGAATG  400

seq1  AAAAGAATAGATGGTTATAAGTGACCCAAACGTTAGTTTTTTAGATTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATAGATGGTTATAAGTGACCCAAACGTTAGTTTTTTAGATTCTC  450

seq1  AAATAAGGAGTTCAGTGGTTGCTAAGGTAAGAAGACAAAGTGCTCATGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGGAGTTCAGTGGTTGCTAAGGTAAGAAGACAAAGTGCTCATGGT  500

seq1  TGGAGTAATTGGTAGTCCCAAAGTGGTGACCAGATGAGTGGAGAGTTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTAATTGGTAGTCCCAAAGTGGTGACCAGATGAGTGGAGAGTTGGA  550

seq1  CTTTAGAATATGAGACCTTGTTGCTTTGACTGAACAGGAAATTTAGAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAATATGAGACCTTGTTGCTTTGACTGAACAGGAAATTTAGAAGA  600

seq1  GCAGAGGTGTCACCTTGGCTAATTTTTAGAATGGGGATGTCAGAGAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGTGTCACCTTGGCTAATTTTTAGAATGGGGATGTCAGAGAAGAA  650

seq1  TTTTGTCTAGATAATGGACAATCACAGATTTAGAGAGACATAGAGAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTAGATAATGGACAATCACAGATTTAGAGAGACATAGAGAAATT  700

seq1  AAGTCAGAAGCCAGAACCTGGCCAAATTGATATGGGCTGTCCTGGAATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGAAGCCAGAACCTGGCCAAATTGATATGGGCTGTCCTGGAATCC  750

seq1  CCGATGTAGTACAGTCCAGGTGCGCTTAGAAACTGGGCATCAGTGTCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATGTAGTACAGTCCAGGTGCGCTTAGAAACTGGGCATCAGTGTCAGT  800

seq1  CCAGGTAAACCCAAAGGTGTTCTGGGACTGGAGAGAAAATGATACATCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAAACCCAAAGGTGTTCTGGGACTGGAGAGAAAATGATACATCCT  850

seq1  TGGGATCTAAGAAGGAGAAATGAGAAGTCCCCAAGGGCATAGTGG-AAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGGGATCTAAGAAGGAGAAATGAGAAGTCCCCAAGGGCATAGTGGAAAGG  900

seq1  GACTGTATAA-GGATTACCCACAAAAGGATGGAGAGGAACCACCATTAAA  948
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATAATGGATTACCCACAAAAGGATGGAGAGGAACCACCATTAAA  950

seq1  TTTATGCACCTGAGGTCTTGAAAAAGGTGATAGGTTCCATTAGGTCCCCT  998
      ||||||||||||||||| ||||||  |||||||| ||||||| || ||||
seq2  TTTATGCACCTGAGGTC-TGAAAA--GTGATAGG-TCCATTAAGT-CCCT  995

seq1  AACTTCTAATATAGGGGAGTTAAAGGGAGGG-AGAAGTC  1036
      ||||||||||||||||||||||||||||||| |||||||
seq2  AACTTCTAATATAGGGGAGTTAAAGGGAGGGTAGAAGTC  1034