BAC Information

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BAC

Clone NameB6Ng01-324H03
Chromosome8 (Build37)
Map Location 33,179,450 - 33,359,659
singlet/doubletdoublet
Overlap gene2010007E15Rik, EG666589
Upstream geneDusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1
Downstream geneEG546052, LOC100042715, LOC628408, EG628412, Wrn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324H03.bB6Ng01-324H03.g
ACCGA112757GA112758
length1,1661,088
definitionB6Ng01-324H03.b B6Ng01-324H03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,179,450 - 33,180,619)(33,358,564 - 33,359,659)
sequence
gaattccagacccgtggctggaatgaatatttaacttgattggcattttg
ctcccatgagcatcactcctccccgtggaaatgtattcacatttcatgaa
ctccccatctctacggctcctttgatctgcagtcattgtcttgcagttgg
gcatttgtctgcctcccgactcatcatcctcccagtccatctaaacaacg
caccacacaagaacttagtgtttccaaagtaacaaaagctagatctgaat
gcttcagtgcgctatgaaaggcctgttgaaaccatcaatcttgctggctc
ttgtggaggtcaagagacggcagagacagctggccaatcaattaaccaag
aaatgcaattgggaagcccaagaaaagccttctccgtgttattctttcca
gcaacataactgtcaatatttacagcaggccatatatcaagacaccaggc
aaggagagaggcctctattgtgagcagcaaatgccggattcgttgctaac
tcttgtgtactgttgaagagagtcagtcctacaggacacagagttttctg
aaccaaactgaaaatatcttatcaacctgaaagaaaagtgtgtggtgcct
atccatgaaagatcatacccactttctcccacactcatcttggctgcctc
agtattacgtaagtaaagaaaaaaattaataaatctggcactggagaggt
gactcagtggcaaaaattactcactgtccatacagagtacctaggtcctg
ttcctagcacttccatgacatcttgcaaacacctgtacttccagttgcag
aaggtccgacaccctcttctggactcctgcccacacatattgcaaatata
ctcatgcaggctcacacgtgtgtgtataaatacaaaactacattatctat
ttttaaaaaattagtgaatgacttatggtaatgaatttttttataactat
attaccagttacacctttaatccctatgattgcataaagcagaaaataaa
ttaggtcttttttggtgctaacattcaccatgagtagatgaccacttatt
atcctcttgtgtagcaagcctggaagacagtatctcagagaaggtctgtt
gagatctcttgtctcttcattggtgacctaagtctcctcagaccaacctg
gaagttccttcttcag
gaattcctaacccactcctaagttttggaatacttgtagctatttttttt
ttcttcttcctggctcaaaaccatcaaattgcaatgggattgtcagggta
tcatcctgagagacaagaagacactgctcactttattgctaaccacagtg
atatatttacctttacatcaagtcatttaacatatccttaaaaggtagaa
aacagacttttgtgtgaagggaatgagttatcctggataactgctggagt
gttgctacatatatcagagaattggttggttagttttaatcaaagcgcca
tttgagaatttaagaaccaggtggtgtctttgagtcattattaggtaaat
ggatttaaatacctaatcccaaccatttattccaaaagttggcaatcaca
aaaactttgctttttaaatagtcagtggtcacttgggagcttgagctagg
gaaaaatgagctttaaatgttgatttcagttacttcccaaattatgctgg
atttggtggctaatgactttaaatttgcttacactggcacttcctcagcc
cacgagacataatccctggcctgaactcaaagtcatgtccctgtgaagaa
ggacagttaccaggcaaagctgatagagatctagctaagaaccaagtgtt
gttcctccaaaattgaggggtgaaatagttacgttgtttccagaaacatt
cattataactaaacctaaaatacctgaaatttatatatttgtttgcgaat
acagagaggtatagagagacatggggttaggggagagacgagaagggaag
aaaaagggtacaaaaacaaacaaacaacaaacaaacaaacagaaccaaaa
acaaaaaataatcccaatgagaaacttgaataaagacaatgactgtactt
tcattcgacagtcatttttggtacatttgtgtatcatatggccagggtct
tcttgctgcatgcactcatagtcattcagttgtatcagtgccacttgaaa
cctcctagtggatggttctccttccatgcaaaaccaactaaccttgagcc
tccctgtggtctggcttcaagtcagatgcctttgctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_33179450_33180619
seq2: B6Ng01-324H03.b_48_1213

seq1  GAATTCCAGACCCGTGGCTGGAATGAATATTTAACTTGATTGGCATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACCCGTGGCTGGAATGAATATTTAACTTGATTGGCATTTTG  50

seq1  CTCCCATGAGCATCACTCCTCCCCGTGGAAATGTATTCACATTTCATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATGAGCATCACTCCTCCCCGTGGAAATGTATTCACATTTCATGAA  100

seq1  CTCCCCATCTCTACGGCTCCTTTGATCTGCAGTCATTGTCTTGCAGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCATCTCTACGGCTCCTTTGATCTGCAGTCATTGTCTTGCAGTTGG  150

seq1  GCATTTGTCTGCCTCCCGACTCATCATCCTCCCAGTCCATCTAAACAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGTCTGCCTCCCGACTCATCATCCTCCCAGTCCATCTAAACAACG  200

seq1  CACCACACAAGAACTTAGTGTTTCCAAAGTAACAAAAGCTAGATCTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACAAGAACTTAGTGTTTCCAAAGTAACAAAAGCTAGATCTGAAT  250

seq1  GCTTCAGTGCGCTATGAAAGGCCTGTTGAAACCATCAATCTTGCTGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGTGCGCTATGAAAGGCCTGTTGAAACCATCAATCTTGCTGGCTC  300

seq1  TTGTGGAGGTCAAGAGACGGCAGAGACAGCTGGCCAATCAATTAACCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGAGGTCAAGAGACGGCAGAGACAGCTGGCCAATCAATTAACCAAG  350

seq1  AAATGCAATTGGGAAGCCCAAGAAAAGCCTTCTCCGTGTTATTCTTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAATTGGGAAGCCCAAGAAAAGCCTTCTCCGTGTTATTCTTTCCA  400

seq1  GCAACATAACTGTCAATATTTACAGCAGGCCATATATCAAGACACCAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATAACTGTCAATATTTACAGCAGGCCATATATCAAGACACCAGGC  450

seq1  AAGGAGAGAGGCCTCTATTGTGAGCAGCAAATGCCGGATTCGTTGCTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGAGGCCTCTATTGTGAGCAGCAAATGCCGGATTCGTTGCTAAC  500

seq1  TCTTGTGTACTGTTGAAGAGAGTCAGTCCTACAGGACACAGAGTTTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGTACTGTTGAAGAGAGTCAGTCCTACAGGACACAGAGTTTTCTG  550

seq1  AACCAAACTGAAAATATCTTATCAACCTGAAAGAAAAGTGTGTGGTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACTGAAAATATCTTATCAACCTGAAAGAAAAGTGTGTGGTGCCT  600

seq1  ATCCATGAAAGATCATACCCACTTTCTCCCACACTCATCTTGGCTGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGAAAGATCATACCCACTTTCTCCCACACTCATCTTGGCTGCCTC  650

seq1  AGTATTACGTAAGTAAAGAAAAAAATTAATAAATCTGGCACTGGAGAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTACGTAAGTAAAGAAAAAAATTAATAAATCTGGCACTGGAGAGGT  700

seq1  GACTCAGTGGCAAAAATTACTCACTGTCCATACAGAGTACCTAGGTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGTGGCAAAAATTACTCACTGTCCATACAGAGTACCTAGGTCCTG  750

seq1  TTCCTAGCACTTCCATGACATCTTGCAAACACCTGTACTTCCAGTTGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGCACTTCCATGACATCTTGCAAACACCTGTACTTCCAGTTGCAG  800

seq1  AAGGTCCGACACCCTCTTCTGGACTCCTGCCCACACATATTGCAAATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCGACACCCTCTTCTGGACTCCTGCCCACACATATTGCAAATATA  850

seq1  CTCATGCAGGCTCACACGTGTGTGTATAAATACAAAACTACATTATCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCAGGCTCACACGTGTGTGTATAAATACAAAACTACATTATCTAT  900

seq1  TTTTAAAAAATTAGTGAATGACTTATGGTAATGAA-TTTTTTATAACTAT  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTTAAAAAATTAGTGAATGACTTATGGTAATGAATTTTTTTATAACTAT  950

seq1  ATTACCAGTTACACCTTTAATCCCTATGATTGCATAAAGCAGAAAAATAA  999
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTACCAGTTACACCTTTAATCCCTATGATTGCATAAAGCAG-AAAATAA  999

seq1  ATTAGGTC-TTTTTGGTGCTAACATTCACCATGAGTAGATGA-CACTTA-  1046
      |||||||| ||||||||||||||||||||||||||||||||| |||||| 
seq2  ATTAGGTCTTTTTTGGTGCTAACATTCACCATGAGTAGATGACCACTTAT  1049

seq1  TAT-CTC-TGTGTAGCAAAGCCGGGAGACAGTATCTCCAGAGAAGGTCTG  1094
      ||| ||| ||||||||||  | || ||||||||||| |||||||||||||
seq2  TATCCTCTTGTGTAGCAAGCCTGGAAGACAGTATCT-CAGAGAAGGTCTG  1098

seq1  TGAAGAATCTCTTGTCTCTTTCATT-GTGACCCTAAAGTCT-CTCAGAAC  1142
      |  || |||||||||||| |||||| ||||||   |||||| ||||| ||
seq2  TTGAG-ATCTCTTGTCTC-TTCATTGGTGACC--TAAGTCTCCTCAG-AC  1143

seq1  CAACCCTTGAGTGTTCCTTTTTCTTCAG  1170
      |||||  ||   |||||   ||||||||
seq2  CAACC--TGGAAGTTCC---TTCTTCAG  1166

seq1: chr8_33358564_33359659
seq2: B6Ng01-324H03.g_66_1153 (reverse)

seq1  GGAGCAAAGGCATCTTGCCTTTGAAGCCAGA-CACAGGGGAAGCTTCAAG  49
      |||||||||||||||  |  ||||||||||| |||||||  ||  |||||
seq2  GGAGCAAAGGCATCTGAC--TTGAAGCCAGACCACAGGG--AGGCTCAAG  46

seq1  TGTAGTTTGGTTTTGCATGGAAAGGAGAAACCATCACCTAGGAGGTTTTC  99
        ||| |||||||||||||| |||||| |||||||  |||||||| ||||
seq2  GTTAG-TTGGTTTTGCATGG-AAGGAG-AACCATCCACTAGGAGG-TTTC  92

seq1  AAGTGGCACTTGATACAACTGAATGACTATGAGTGCATGCAGCAAG-AGA  148
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  AAGTGGCAC-TGATACAACTGAATGACTATGAGTGCATGCAGCAAGAAGA  141

seq1  CCCTGGCCATATGATACACAAATGTACCAAAAATGACTGTCGAATG-AAG  197
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCCTGGCCATATGATACACAAATGTACCAAAAATGACTGTCGAATGAAAG  191

seq1  TACAGTCATTGTCTTTATTCAAGTTTCTCATTTGGGATTATTTTTTTGTT  247
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  TACAGTCATTGTCTTTATTCAAGTTTCTCA-TTGGGATTA-TTTTTTGTT  239

seq1  TTTGGTTCTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTGTACCCTTTTT  297
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTGGTTCTGTTTGTTTGTTTG-TTGTTTGTTTGTTTTTGTACCCTTTTT  288

seq1  CTTCCC-TCTCGTCTCTCCCCTAACCCCATGTCTCTCTATACCTCTCTGT  346
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTTCTCGTCTCTCCCCTAACCCCATGTCTCTCTATACCTCTCTGT  338

seq1  ATTCGCAAACAAATATATAAATTTCAGGTATTTTAGGTTTAGTTATAATG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGCAAACAAATATATAAATTTCAGGTATTTTAGGTTTAGTTATAATG  388

seq1  AATGTTTCTGGAAACAACGTAACTATTTCACCCCTCAATTTTGGAGGAAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTCTGGAAACAACGTAACTATTTCACCCCTCAATTTTGGAGGAAC  438

seq1  AACACTTGGTTCTTAGCTAGATCTCTATCAGCTTTGCCTGGTAACTGTCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTGGTTCTTAGCTAGATCTCTATCAGCTTTGCCTGGTAACTGTCC  488

seq1  TTCTTCACAGGGACATGACTTTGAGTTCAGGCCAGGGATTATGTCTCGTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACAGGGACATGACTTTGAGTTCAGGCCAGGGATTATGTCTCGTG  538

seq1  GGCTGAGGAAGTGCCAGTGTAAGCAAATTTAAAGTCATTAGCCACCAAAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGGAAGTGCCAGTGTAAGCAAATTTAAAGTCATTAGCCACCAAAT  588

seq1  CCAGCATAATTTGGGAAGTAACTGAAATCAACATTTAAAGCTCATTTTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATAATTTGGGAAGTAACTGAAATCAACATTTAAAGCTCATTTTTC  638

seq1  CCTAGCTCAAGCTCCCAAGTGACCACTGACTATTTAAAAAGCAAAGTTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTCAAGCTCCCAAGTGACCACTGACTATTTAAAAAGCAAAGTTTT  688

seq1  TGTGATTGCCAACTTTTGGAATAAATGGTTGGGATTAGGTATTTAAATCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGCCAACTTTTGGAATAAATGGTTGGGATTAGGTATTTAAATCC  738

seq1  ATTTACCTAATAATGACTCAAAGACACCACCTGGTTCTTAAATTCTCAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTAATAATGACTCAAAGACACCACCTGGTTCTTAAATTCTCAAA  788

seq1  TGGCGCTTTGATTAAAACTAACCAACCAATTCTCTGATATATGTAGCAAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCTTTGATTAAAACTAACCAACCAATTCTCTGATATATGTAGCAAC  838

seq1  ACTCCAGCAGTTATCCAGGATAACTCATTCCCTTCACACAAAAGTCTGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGCAGTTATCCAGGATAACTCATTCCCTTCACACAAAAGTCTGTT  888

seq1  TTCTACCTTTTAAGGATATGTTAAATGACTTGATGTAAAGGTAAATATAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTTTTAAGGATATGTTAAATGACTTGATGTAAAGGTAAATATAT  938

seq1  CACTGTGGTTAGCAATAAAGTGAGCAGTGTCTTCTTGTCTCTCAGGATGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGGTTAGCAATAAAGTGAGCAGTGTCTTCTTGTCTCTCAGGATGA  988

seq1  TACCCTGACAATCCCATTGCAATTTGATGGTTTTGAGCCAGGAAGAAGAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTGACAATCCCATTGCAATTTGATGGTTTTGAGCCAGGAAGAAGAA  1038

seq1  AAAAAAAATAGCTACAAGTATTCCAAAACTTAGGAGTGGGTTAGGAATTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATAGCTACAAGTATTCCAAAACTTAGGAGTGGGTTAGGAATTC  1088