BAC Information

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BAC

Clone NameB6Ng01-324N21
Chromosome8 (Build37)
Map Location 83,582,440 - 83,583,399
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546075, Gypa, Frem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793
Downstream geneLOC236010, LOC384852, Inpp4b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324N21.bB6Ng01-324N21.g
ACCGA113074GA113075
length966649
definitionB6Ng01-324N21.b B6Ng01-324N21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacagtaagacctgccaggtcctaccacatgttttctttgccca
tcagtccctcatctttaaggggccacagaactccagacctctatatttca
gctttgtatcactacaataaaatacttgaggcaataaacttcaaaagatg
caagttttattcatctcacactttggagttttaaattcaaggctgaaaag
ctccacttcctagaggcctctcagtgagataaaagaatctcattgatgaa
catatgtcatatgagtgcctgaatcttaggccagaaagaaaacagaacga
gtgggcaggtttctgcagtctcttttcagagcaagccctcagtgacctaa
tgccctcccatgaagacttactctctaacacttactctaatgctgacact
ttcttctgcatcaccactgtggatagagttgacacatggcactttgtggg
aggcaatacataaatcactacatttttttccttatatcaaatgtgttcac
acaatcacccatattaaggttgtaatcaaccaacaaggatccaagttgcc
ccagtatcatactaaactcagggcttctatgggaggctccttctgctctg
agtgacagaaaggaaataaaacttaagtccttctcagaaggttgtcgttg
ttgttgttgttgttgttgttgttattgttgttgttgttttctgacatggt
accttgaatctcaggctggtcttaaactcactatgtagctgaggatgtcc
ttgaacttcctgatcctcttgtcttcgtctcccaaggactagaatttgca
gatgtgcaccctctatgcccaatttatgcagtgctggagtttagactcaa
gggtcttgtgcaagcaaggcaagtagtctaccaactgagataccccaaac
tcagaaatctttcaatatcatttttagagtttctgaagaagaaagagaag
gaggaggaagaggagg

gaattctctctgtagaccaggctggtctcagattcagagatctacctggc
tctgcctccagagtgctggaattaaaggcatgaattgaatgaaccaccac
tgcctggctctctctctctctctctctctctctctctctctctctctctc
tctctctgtgcttttacacactccccccccccctgcacccctgtccctct
ctgtgagagagccctctccgcacctccacacatgctttttgctctctctc
tctgagattgagggatggcgcttttgtaccatctgtatctccccccgctc
tctcttactcttggatgctctctggggtgacggctatgacttttggggct
agctcggcatacggagatgactctcacacctgtaccaatgaggatatgcc
tttcttatctctgttctgctgcggaagtgtatccatacagtgagtgctat
cggtctcaccctctatgctccgctctacagatacacatacacacacacac
acacacgcacagatgacctttcagagtcagagagcactctgtctgtagag
agatatatcaatctttttcgttgtagagagagagtgtgtgtatctcaccc
acatagattcatttatactgtctgtgtggatgactgtacgaagctgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_83582440_83583399
seq2: B6Ng01-324N21.b_45_1010 (reverse)

seq1  CCTCCTCTTCCTCCTCCTTCTCTTTCTTCTTCAGAAACTCT-AAAATGAT  49
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCTCCTCTTCCTCCTCCTTCTCTTTCTTCTTCAGAAACTCTAAAAATGAT  50

seq1  ATTG-AAGATTTCTGAGTTTGGGGTATCTCAGTTGGTAGACTACTTGCCT  98
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGATTTCTGAGTTTGGGGTATCTCAGTTGGTAGACTACTTGCCT  100

seq1  TGCTTGCACAAGA-CCTTGAGTCTAAACTCCAGCACTGCATAAATTGGGC  147
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGCTTGCACAAGACCCTTGAGTCTAAACTCCAGCACTGCATAAATTGGGC  150

seq1  ATAGA-GGTGCACATCTGC-AATTCTAGTCCTTGGGAGACGAAGACAAGA  195
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATAGAGGGTGCACATCTGCAAATTCTAGTCCTTGGGAGACGAAGACAAGA  200

seq1  GGATCAGG-AGTTCAAGGACATCCTCAGCTACATAGTGAGTTTAAGACCA  244
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGGAAGTTCAAGGACATCCTCAGCTACATAGTGAGTTTAAGACCA  250

seq1  GCCTGAGATTCAAGGTACCATGTCAGAAAACAACAACAACAATAACAACA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGATTCAAGGTACCATGTCAGAAAACAACAACAACAATAACAACA  300

seq1  ACAACAACAACAACAACAACGACAACCTTCTGAGAAGGACTTAAGTTTTA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAACAACAACAACGACAACCTTCTGAGAAGGACTTAAGTTTTA  350

seq1  TTTCCTTTCTGTCACTCAGAGCAGAAGGAGCCTCCCATAGAAGCCCTGAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTCTGTCACTCAGAGCAGAAGGAGCCTCCCATAGAAGCCCTGAG  400

seq1  TTTAGTATGATACTGGGGCAACTTGGATCCTTGTTGGTTGATTACAACCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATGATACTGGGGCAACTTGGATCCTTGTTGGTTGATTACAACCT  450

seq1  TAATATGGGTGATTGTGTGAACACATTTGATATAAGGAAAAAAATGTAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGGGTGATTGTGTGAACACATTTGATATAAGGAAAAAAATGTAGT  500

seq1  GATTTATGTATTGCCTCCCACAAAGTGCCATGTGTCAACTCTATCCACAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATGTATTGCCTCCCACAAAGTGCCATGTGTCAACTCTATCCACAG  550

seq1  TGGTGATGCAGAAGAAAGTGTCAGCATTAGAGTAAGTGTTAGAGAGTAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATGCAGAAGAAAGTGTCAGCATTAGAGTAAGTGTTAGAGAGTAAG  600

seq1  TCTTCATGGGAGGGCATTAGGTCACTGAGGGCTTGCTCTGAAAAGAGACT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGGGAGGGCATTAGGTCACTGAGGGCTTGCTCTGAAAAGAGACT  650

seq1  GCAGAAACCTGCCCACTCGTTCTGTTTTCTTTCTGGCCTAAGATTCAGGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACCTGCCCACTCGTTCTGTTTTCTTTCTGGCCTAAGATTCAGGC  700

seq1  ACTCATATGACATATGTTCATCAATGAGATTCTTTTATCTCACTGAGAGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATATGACATATGTTCATCAATGAGATTCTTTTATCTCACTGAGAGG  750

seq1  CCTCTAGGAAGTGGAGCTTTTCAGCCTTGAATTTAAAACTCCAAAGTGTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGGAAGTGGAGCTTTTCAGCCTTGAATTTAAAACTCCAAAGTGTG  800

seq1  AGATGAATAAAACTTGCATCTTTTGAAGTTTATTGCCTCAAGTATTTTAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATAAAACTTGCATCTTTTGAAGTTTATTGCCTCAAGTATTTTAT  850

seq1  TGTAGTGATACAAAGCTGAAATATAGAGGTCTGGAGTTCTGTGGCCCCTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTGATACAAAGCTGAAATATAGAGGTCTGGAGTTCTGTGGCCCCTT  900

seq1  AAAGATGAGGGACTGATGGGCAAAGAAAACATGTGGTAGGACCTGGCAGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGAGGGACTGATGGGCAAAGAAAACATGTGGTAGGACCTGGCAGG  950

seq1  TCTTACTGTTGAATTC  960
      ||||||||||||||||
seq2  TCTTACTGTTGAATTC  966


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