BAC Information

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BAC

Clone NameB6Ng01-325P15
Chromosome8 (Build37)
Map Location 50,910,365 - 51,082,095
singlet/doubletdoublet
Overlap geneLOC100039919
Upstream gene2900073C17Rik, LOC100039866, 4930555F03Rik
Downstream geneEG667495, LOC100039954, LOC100039966
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-325P15.bB6Ng01-325P15.g
ACCGA113900GA113901
length9891,068
definitionB6Ng01-325P15.b B6Ng01-325P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,081,103 - 51,082,095)(50,910,365 - 50,911,436)
sequence
gaattccctataatgcagtttgttaaacaccaattgtccctttggagagc
atatgactgtcaatcacagacatgccgtgaactgactgcatagtgtcggc
tccctcctttaccatggcatccaacagagcagtctgcccaccttaaatca
ccttgacaagatgaatcccacaagctgcatgaaaaatgagtgctaacatt
ttcctcctgtagaatctgcatcgtcagttctcatcattgttccaactcat
ccatgttctctgatgcttatacctgttgggttactatgtccatggcttct
ctacccattcttgcaagtgatttatgtcgccatgcacgtaactgctgcaa
tgtggctttggattttcctatacctctatatgcgagaagcgtgtaccata
acatggtactgttcacaagtgatggaacagtcaaagggaaggacctattt
attaggaccttgccctgatcagggtacactggtcttctgtttcctgatga
gggtacacgtgattccacattctcatatgcttcttccctcattggctgac
ttccttctgactcgggactgggaaaccagtccatcctaggctagaactac
tcatgctagatagctgagtaaatatttcttttgtctctaattgatcactg
caggcatgtgtcacactgatagtagaacttttagtgatgtagtgatctct
tatacactactgaatactcctgtacctctgacgcatggcggtcagacacc
cacactttcatttaagaaaatgatattaaacaattttttgtatccagtat
attcaacaactactatgtgtgttataatgatgcttttatacactaagaaa
acatatcttatctctcatgctcactgttcctctcaaaagactacatatgc
tccttgtactgcgttcttggtttaaattacctgctactcatatgaagtaa
tgatggtacatcaactttctacatcttaaactctttcta
gaattcccactttaaaagttgtaaactctggtcttccagagaaaaaggaa
gtcatgtgggtagggattcctggtgctgtcttgaatatggctgttgtgtt
tctcatgctccgaggagggggataacatatggatatattgtggggctgcc
tgtgccatctcttaaattgccagaccacgttgtaaggcacaccttatggc
cagagcagcaagacatgccaaagatgcactgcagagcccttccacatgat
cctcttctcataccctcagctgaccttgataatatgcggagggcctttca
caaatactaatgatctggtgactcttcggatggggctatcaaaattgtca
tatagggtgggtgatttacctcttctgtgcgctggcaagtcaccattgtg
tgaaaaaaagaaaaaaacttactggaattgctcaactgttaactttgttt
tttttttttttttttttgttttgaaaatctccatgattttgggcagaaag
tacttcctgaatattttgtccttctgcacaacatccacagcctccttatt
ttgtttccctcttaatgtctctctcttgtgctctaaaaccctctgaccag
gactgtatgagctcttatgtcatgattaacctttaactttattttccctt
tgaggacagtgccttcccacaatgctctgctcttcccctaaaaaaaaaat
ccagtctacatattctttaagacacatcccccattctaactctttctatg
ctttccagattcattcatttggtgtgtgagtaccactttataacagatat
ttgattccttttttgtttaacttttgaactggattcattctctcatcatt
tagcaaagatctttgtaaagtaacagatatccatgaaaatttggaaaatc
caagttaagtgaatcatggggtcttactggggtatgcaataaggtgtagc
aagggagagcatgtattgtcttcctgagacacacgggttccatttacaat
gtatggtcatgaaaacattcagctaagatgaaagtaaggaagccagatct
atgtccataatctttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_51081103_51082095
seq2: B6Ng01-325P15.b_42_1030 (reverse)

seq1  TAGAAAGAGTTTAAGATGTGAGAAAGTTGATTGTACCATCATTACTTCAT  50
      ||||||||||||||||||| |||||||||| |||||||||||||||||| 
seq2  TAGAAAGAGTTTAAGATGT-AGAAAGTTGA-TGTACCATCATTACTTCA-  47

seq1  TATGACTAGCAACTAATTTAAACCAAGAAGGCAATATAAGGAGCATATGT  100
      ||||| |||||  |||||||||||||||| ||| || |||||||||||||
seq2  TATGAGTAGCAGGTAATTTAAACCAAGAACGCAGTACAAGGAGCATATGT  97

seq1  TGTCTTCTTGAGAAGAACAGTGAG-TTTAGAGTTAAGATATGTTTTCTTA  149
       ||||| |||||| ||||||||||  | |||| |||||||||||||||||
seq2  AGTCTT-TTGAGAGGAACAGTGAGCATGAGAGATAAGATATGTTTTCTTA  146

seq1  GTGTATAAAAGCATCATTATAACACACATAGTAGTTGTTGAATATACTGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAAAAGCATCATTATAACACACATAGTAGTTGTTGAATATACTGG  196

seq1  GGACAAAAAACTGTTTATTATCATTTTGTTAAATGAAAGTGTGGCTGGGT  249
        |||||||| |||||| ||||||||| |||||||||||||||| ||  |
seq2  ATACAAAAAATTGTTTAATATCATTTTCTTAAATGAAAGTGTGGGTGTCT  246

seq1  GATTGATATGTGACAGAGTGACAGGAGTATTCAGTAGTCTATAA-AGATC  298
      ||  |  ||| | |||||  |||||||||||||||||| ||||| |||||
seq2  GACCGCCATGCGTCAGAGGTACAGGAGTATTCAGTAGTGTATAAGAGATC  296

seq1  ACTACATCACTAAAAGTTCTACTACCACTGTGACACATGCCTGCAGTGAT  348
      |||||||||||||||||||||||| || ||||||||||||||||||||||
seq2  ACTACATCACTAAAAGTTCTACTATCAGTGTGACACATGCCTGCAGTGAT  346

seq1  CAATTAGAAACAAAAGAAATATTTACTTTGCTATCTAGCATTGGTAGTTC  398
      |||||||| ||||||||||||||||||  ||||||||||||  |||||||
seq2  CAATTAGAGACAAAAGAAATATTTACTCAGCTATCTAGCATGAGTAGTTC  396

seq1  TAGCCTAGGATGGACTGGTGCCATTAATTTGGAGTCAGAAGGAAGTCAGC  448
      |||||||||||||||||||  |   | |   |||||||||||||||||||
seq2  TAGCCTAGGATGGACTGGTTTC-CCAGTCCCGAGTCAGAAGGAAGTCAGC  445

seq1  CAATGAGGGAAGAAGCATATGAGAATGTGGAATCACGTGTACCCTCATCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGGGAAGAAGCATATGAGAATGTGGAATCACGTGTACCCTCATCA  495

seq1  GGAAACAGAAGACCAGTGTACCCTGATCAGGGCAAGGTCCTAATAAATAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAGAAGACCAGTGTACCCTGATCAGGGCAAGGTCCTAATAAATAG  545

seq1  GTCCTTCCCTTTGACTGTTCCATCACTTGTGAACAGTGCCATGCTTTGGA  598
      ||||||||||||||||||||||||||||||||||||| ||||| | ||| 
seq2  GTCCTTCCCTTTGACTGTTCCATCACTTGTGAACAGTACCATGTTATGGT  595

seq1  ACACGCTCTTAGCACATAGAGCTAAAGGAAAATCCAAAGCCACACTGCAG  648
      |||||||  | ||| |||||| || ||||||||||||||||||| |||||
seq2  ACACGCTTCTCGCATATAGAGGTATAGGAAAATCCAAAGCCACATTGCAG  645

seq1  CAGTTACCTGCATGGCGACTGAAATCACTTGCAAGAATGGGTAGAGAAGC  698
      ||||||| |||||||||||  |||||||||||||||||||||||||||||
seq2  CAGTTACGTGCATGGCGACATAAATCACTTGCAAGAATGGGTAGAGAAGC  695

seq1  CACGGACATAGTAACCCAACAGGTAAATGCATCAGAGAAGATGGATGAGT  748
      || |||||||||||||||||||||| | ||||||||||| ||||||||||
seq2  CATGGACATAGTAACCCAACAGGTATAAGCATCAGAGAACATGGATGAGT  745

seq1  CGGAACAATGATGAGAACTGAGGATGCAGATTCTACAGGAGGAAATTGTT  798
       |||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  TGGAACAATGATGAGAACTGACGATGCAGATTCTACAGGAGGAAAATGTT  795

seq1  AGCACTCATTCTTCATGCAGTTTGTGGGATTCATGTTTGTCAAGGTGATT  848
      |||||||||| ||||||||| |||||||||||||  ||||||||||||||
seq2  AGCACTCATTTTTCATGCAGCTTGTGGGATTCAT-CTTGTCAAGGTGATT  844

seq1  TAAGCTGGGCAGACTGCTCTGTTGGATGCCATGGTAAAGGAGGGAGCAGA  898
      |||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAAGGTGGGCAGACTGCTCTGTTGGATGCCATGGTAAAGGAGGGAGCCGA  894

seq1  CACTATGCAGTCAGTTCACGGCATGTCTGTGATTGACAGTCATATGCTCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGCAGTCAGTTCACGGCATGTCTGTGATTGACAGTCATATGCTCT  944

seq1  CCAAATGGACAATTGGTGTTTTACAAACTGCATTATAGGGAATTC  993
      ||||| ||||||||||||||| |||||||||||||||||||||||
seq2  CCAAAGGGACAATTGGTGTTTAACAAACTGCATTATAGGGAATTC  989

seq1: chr8_50910365_50911436
seq2: B6Ng01-325P15.g_65_1132

seq1  GAATTCACACTTTCTAAGTTGTAAACTCTGGTCTTCCAGAGAAAAAGGAA  50
      |||||| ||||||  |||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACTTTAAAAGTTGTAAACTCTGGTCTTCCAGAGAAAAAGGAA  50

seq1  GTCATGTGGGTAGGGATTCCTGGTGCTGTCTTGAAGATGGCTGTTGTGTT  100
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTCATGTGGGTAGGGATTCCTGGTGCTGTCTTGAATATGGCTGTTGTGTT  100

seq1  TCTCATGCTCCGAGGAGGGGGATAACATATGGATATATTGTGGGGCTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGCTCCGAGGAGGGGGATAACATATGGATATATTGTGGGGCTGCC  150

seq1  TGTGCCATCTCTTAAATTGCCAGACCACGTTGTAAGGCACAGCAGATGGC  200
      ||||||||||||||||||||||||||||||||||||||||| |  |||||
seq2  TGTGCCATCTCTTAAATTGCCAGACCACGTTGTAAGGCACACCTTATGGC  200

seq1  CAGAGCAGCAGGACATGCCAAAGATGCACTGCAGAGCCCTTCCACAGGAT  250
      |||||||||| ||||||||||||||||||||||||||||||||||| |||
seq2  CAGAGCAGCAAGACATGCCAAAGATGCACTGCAGAGCCCTTCCACATGAT  250

seq1  CCTCTTCTCATACCAGTAGCGGAGCTTGAGAATATGCGGAGGGCCTTTCA  300
      ||||||||||||||   ||| || ||||| ||||||||||||||||||||
seq2  CCTCTTCTCATACCCTCAGCTGACCTTGATAATATGCGGAGGGCCTTTCA  300

seq1  CTAAGACAAATGATCTGGTGACTCTTCAGATGGTGCTATCAAAATTGTCA  350
      | || || ||||||||||||||||||| ||||| ||||||||||||||||
seq2  CAAATACTAATGATCTGGTGACTCTTCGGATGGGGCTATCAAAATTGTCA  350

seq1  TATAGGGTGGGTGATTTACCTCTTCTGTGCGCTGGCAAGTCACCATTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGTGGGTGATTTACCTCTTCTGTGCGCTGGCAAGTCACCATTGTG  400

seq1  TGAGAGAAAGAAAAAAACTTACTGGAAGTTTTCAACTGTTAACTTTGTTT  450
      ||| | ||||||||||||||||||||| |  |||||||||||||||||||
seq2  TGAAAAAAAGAAAAAAACTTACTGGAATTGCTCAACTGTTAACTTTGTTT  450

seq1  TTTTTTTTTTTTTTTTTTTTTTTAAAATCTCCATGATTTTGGGCAGAAAG  500
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTGTTTTGAAAATCTCCATGATTTTGGGCAGAAAG  500

seq1  TACTTCCTGAATATTTTGTCCTTCTGCACAACATCGACAGCCTCCTTATT  550
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TACTTCCTGAATATTTTGTCCTTCTGCACAACATCCACAGCCTCCTTATT  550

seq1  TTGTTTCCCTCTTAATGTCTCTCTCTTGTGCTCTAAAACCCTCTGACCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCCCTCTTAATGTCTCTCTCTTGTGCTCTAAAACCCTCTGACCAG  600

seq1  GACTGTATGAGCTCTTATGTCATGATTAACCTTTAACTTTATTTTCCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATGAGCTCTTATGTCATGATTAACCTTTAACTTTATTTTCCCTT  650

seq1  TGAGGACAGTGCCTTCCCACAATGCTCTGCTCTTCCCCTAAAAAAAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACAGTGCCTTCCCACAATGCTCTGCTCTTCCCCTAAAAAAAAAAT  700

seq1  CCAGTCTACATATTCTTTAAGACACATCCCCCATTCTAACTC-TTCTATG  749
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCAGTCTACATATTCTTTAAGACACATCCCCCATTCTAACTCTTTCTATG  750

seq1  CTTTCCAGATTCATTCATTTGGTGTGTGAGTACCACTTTATAACAGATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGATTCATTCATTTGGTGTGTGAGTACCACTTTATAACAGATAT  800

seq1  TTGATTCCTTTTTTGTTTAACTTTTGAACTGGATTCATTCTCTCATCATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCCTTTTTTGTTTAACTTTTGAACTGGATTCATTCTCTCATCATT  850

seq1  TAGCAAAGATCTTTGTAAAAGTAACAGATAT-CATGAAAATTTGG-AAAT  897
      |||||||||||||||| |||||||||||||| ||||||||||||| ||||
seq2  TAGCAAAGATCTTTGT-AAAGTAACAGATATCCATGAAAATTTGGAAAAT  899

seq1  CCAAGTT-AGTGAATACATGGGGTCTTACTGGGGTATGCAATTAAAGGTG  946
      ||||||| ||||||| ||||||||||||||||||||||||||  ||||||
seq2  CCAAGTTAAGTGAAT-CATGGGGTCTTACTGGGGTATGCAAT--AAGGTG  946

seq1  TAGCAA-GGAGAGCAGGTATTGTCCTCCTGAAGACACAGGGGTTCCATTT  995
      |||||| |||||||| |||||||| ||||| ||||||| |||||||||||
seq2  TAGCAAGGGAGAGCATGTATTGTCTTCCTG-AGACACACGGGTTCCATTT  995

seq1  AGAATGTCAGTGGTCATGAAAACA-TCAGCAAAGATGAAAGTAAGGAGGC  1044
      | |||||   |||||||||||||| ||||| |||||||||||||||| ||
seq2  ACAATGT--ATGGTCATGAAAACATTCAGCTAAGATGAAAGTAAGGAAGC  1043

seq1  CAAGATCTATGTCCATAATTCCTTTCCT  1072
      | |||||||||||||||||  |||||||
seq2  C-AGATCTATGTCCATAAT--CTTTCCT  1068