BAC Information

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BAC

Clone NameB6Ng01-327J11
Chromosome8 (Build37)
Map Location 15,375,065 - 15,376,076
singlet/doubletsinglet
Overlap genenone
Upstream geneDlgap2, C030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2, EG665599
Downstream geneEG234097, EG665619, LOC634008, Csmd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-327J11.bB6Ng01-327J11.g
ACCGA115097GA115098
length1,2001,014
definitionB6Ng01-327J11.b B6Ng01-327J11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattacatggagaaaagtgctgcaccaaacaaatcaataaataca
acgcaaagccataaataggatcatggtaaaaagaaattccaaaattatct
caatagaagcaaaatggggctttgcagagatcaacataccttgataaaag
ccaccaaagaagctaggaatataaggaacatattgtaatatattaaagct
gtatgtgacaaagatataaccaacattatacttaatatggaaaaactaag
atttctacccaaatcatgagtgtggtgaaggtaccctttctcgctggtct
tactcaatagagtgctcaacagttagttagagacaggagaaagaaataca
gatgattttaaaaaatcaggaagaagtcaaattattcctactttcagatg
gtgcagccctatacttagaagactttaaaaactctaccagaaagctttta
aatctaataaacactttcaacaatctaggctacaaaaccaacaagaagac
accattagcttttccatatcaataacaaacttgctaaaaatagatcagtt
taaaaaaaaacaactcatatatatgatagctgcaaataaataaacaaatg
acttagaataaatatcaccaagggggcaaaatacatctatagtgaaactt
taagacattgaaaatagcaatatgagtacactgtacctgtcttcagatac
accagaaaagagaattggatctcattacagatgtttgtgagacaccatgt
ggttgctgggaattgaactcaggacctttggaagagcagtcagtgctctt
aactgtggagccatgtcttcagcctgaagacagcaacagaatatgaggga
aacactttctgtgctcaagggagtggccgagttgatattgtgaagacagc
agtatcacggaaagcaatctataaattcaaagcagtgctcatcaaagatc
caattaccttctaacaaaacaagtaaaacaactcaaaattcatatcaaaa
gaccctggataacgaaaacaatcctgaataaaatgatcattgctataggt
atcataattcacattctcaaattgtaccatagagctatagtgcatctgcc
acggtgctggcatgaagactacacagtcgattaataataaaatgtgatcg
atgttctatccaaccaacaggccattttgttatttgaacaaaggctgtgc

gaattctgcccgttataccatctgataattgcatcagtccgagacacagc
tctgctctgtggctagggagacaaataaatctattcttgtcaggcaataa
acaggagagggggtttgagatgccatctgaagtaattttttttaaatgtc
acttggtgaacatttgaaaatgaagctataattactgtgacattgtcaag
gagaggccccagagcttttggggtaaggcagggggaggtgattctaaact
gatgagagcttggccacactatgtgccagcgttacctcacatgttcctag
taagatgacgtatgtcacaaattaaaggcgacagtggctacgtggcccta
gcctgggcctgggcacagtgtcttccccaaggagagtctatgtatatcct
ccactggaaaaatttcatttttactctattttttgtcattggtaattttt
atgtcattaaactacaagagctgtcagcaagggggctgaggactctaagt
gagctctgggaagtaaatgaaaacagtataattaaaaaaaatttaatgaa
aatatagttgcatcttgtcctttatcctttcctctctctctctctatcca
ctctcatgtcccttccctgtaatctgtcccatatcctccctatttcttcc
caatttggtgccctctctttctttggttatcatggttagatatataatgt
ttaaatatatagatacaaactatgaagtctgctcagagtggtatgagtat
atgattttcagctctgaccattttctattggataagcaattagagccctc
attcctgggagaagtagttcacacactcttggcagtcatgccctgtctcc
agttgtttgtctagagatgggttctctatgacatttcctctttctacctt
tcgaatatctctgtcgtccttgttcagatcttgtttaggcagccatattg
ttgatgaatatcttgtgacagtatctcacagaacttttccaggcctctgg
cctttacagttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_15375065_15376076
seq2: B6Ng01-327J11.g_66_1079

seq1  GAATTCTGCCCGTTATACCATCTGATAATTGCATCAGTCCGAGACACAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCCGTTATACCATCTGATAATTGCATCAGTCCGAGACACAGC  50

seq1  TCTGCTCTGTGGCTAGGGAGACAAATAAATCTATTCTTGTCAGGCAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTGTGGCTAGGGAGACAAATAAATCTATTCTTGTCAGGCAATAA  100

seq1  ACAGGAGAGGGGGTTTGAGATGCCATCTGAAGTAATTTTTTTTAAATGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAGGGGGTTTGAGATGCCATCTGAAGTAATTTTTTTTAAATGTC  150

seq1  ACTTGGTGAACATTTGAAAATGAAGCTATAATTACTGTGACATTGTCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTGAACATTTGAAAATGAAGCTATAATTACTGTGACATTGTCAAG  200

seq1  GAGAGGCCCCAGAGCTTTTGGGGTAAGGCAGGGGGAGGTGATTCTAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCCCCAGAGCTTTTGGGGTAAGGCAGGGGGAGGTGATTCTAAACT  250

seq1  GATGAGAGCTTGGCCACACTATGTGCCAGCGTTACCTCACATGTTCCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGAGCTTGGCCACACTATGTGCCAGCGTTACCTCACATGTTCCTAG  300

seq1  TAAGATGACGTATGTCACAAATTAAAGGCGACAGTGGCTACGTGGCCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGACGTATGTCACAAATTAAAGGCGACAGTGGCTACGTGGCCCTA  350

seq1  GCCTGGGCCTGGGCACAGTGTCTTCCCCAAGGAGAGTCTATGTATATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGCCTGGGCACAGTGTCTTCCCCAAGGAGAGTCTATGTATATCCT  400

seq1  CCACTGGAAAAATTTCATTTTTACTCTATTTTTTGTCATTGGTAATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGAAAAATTTCATTTTTACTCTATTTTTTGTCATTGGTAATTTTT  450

seq1  ATGTCATTAAACTACAAGAGCTGTCAGCAAGGGGGCTGAGGACTCTAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTAAACTACAAGAGCTGTCAGCAAGGGGGCTGAGGACTCTAAGT  500

seq1  GAGCTCTGGGAAGTAAATGAAAACAGTATAATTAAAAAAAATTTAATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCTGGGAAGTAAATGAAAACAGTATAATTAAAAAAAATTTAATGAA  550

seq1  AATATAGTTGCATCTTGTCCTTTATCCTTTCCTCTCTCTCTCTCTATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGTTGCATCTTGTCCTTTATCCTTTCCTCTCTCTCTCTCTATCCA  600

seq1  CTCTCATGTCCCTTCCCTGTAATCTGTCCCATATCCTCCCTATTTCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATGTCCCTTCCCTGTAATCTGTCCCATATCCTCCCTATTTCTTCC  650

seq1  CAATTTGGTGCCCTCTCTTTCTTTGGTTATCATGGTTAGATATATAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGGTGCCCTCTCTTTCTTTGGTTATCATGGTTAGATATATAATGT  700

seq1  TTAAATATATAGATACAAACTATGAAGTCTGCTCAGAGTGGTATGAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATATAGATACAAACTATGAAGTCTGCTCAGAGTGGTATGAGTAT  750

seq1  ATGA-TTTCAGCTCTGACCATTTTCTATTGGATAAGCAATTAGAGCCCTC  799
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTCAGCTCTGACCATTTTCTATTGGATAAGCAATTAGAGCCCTC  800

seq1  ATTCCTGGGAGAAGTAGTTCACACACTCTTGGCAGTCATGCCCTGTCTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGGGAGAAGTAGTTCACACACTCTTGGCAGTCATGCCCTGTCTCC  850

seq1  AGTTGTTTGTCTAGAGATGGGTTCTCTATGACATTTCCTCTTTCTACC-T  898
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGTTGTTTGTCTAGAGATGGGTTCTCTATGACATTTCCTCTTTCTACCTT  900

seq1  TCGAATATCTCTGTCGTCCTTGTTCAGATCTTGTTTAGGCAGCCATATTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAATATCTCTGTCGTCCTTGTTCAGATCTTGTTTAGGCAGCCATATTG  950

seq1  TTGATGAATATCTTGTGACAGTATCTCACAGAAC-TTTCCAGGCCTCTGG  997
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTGATGAATATCTTGTGACAGTATCTCACAGAACTTTTCCAGGCCTCTGG  1000

seq1  CCTTTACAAGTTTTC  1012
      ||||||| |||||||
seq2  CCTTTAC-AGTTTTC  1014