BAC Information

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BAC

Clone NameB6Ng01-328H14
Chromosome8 (Build37)
Map Location 62,204,552 - 62,337,369
singlet/doubletdoublet
Overlap genenone
Upstream gene4930431L04Rik, BC030500, LOC665116, LOC436042
Downstream geneAadat, Mfap3l, LOC100040679
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328H14.bB6Ng01-328H14.g
ACCGA115728GA115729
length1,1731,131
definitionB6Ng01-328H14.b B6Ng01-328H14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,204,552 - 62,205,750)(62,336,232 - 62,337,369)
sequence
gaattccatgtaggtcatcaggactggaagtcaaaataaaaagttgggct
tgaaaattgaaaactgtatagaaaaatagttgcagaatgaccgtacttct
gattatgcaacttgactgcctctatattttcatggctcacaggaaaaacc
gagtgaggttcagcaaggaccaacattaatactgcacaaggatgtagcat
gatataagacagacagacaagaaagcttggttcacacataaaaaaaacga
gtagcaaagtgacaaaagcatgtggaagttacagaaacagtgactctgtt
tctatatttattgtctggctctgatacagtaatctcacatcattttcttc
ataaaacaacttgctctcaagccacagagagaacaagagaaaatgtgtca
tcatctaagatgaaataacagaaaaacaaagcagaaaactgaagtttcag
gttttctaaaatagaatttaaagtatttcatagagttcagatgagtttca
gaataggcagcttcaacactgctttctcctctcaacatatagacatagtt
ttctgcagctacctcactgtgagtcacacatgaacatagaagatacagct
acaacattcaggagtcatggagatccccaaccctttctactacttcctta
atggcattcttaatttgtaaccaatgacaatctataaaatgataatatca
actaacattccaaggtagattaggaagctcacaagatctcatacctaaat
gaagagtgccttagtgatttaatgttgtgaagagacaccatgaccaaggc
aacccttatataaaaaccactcaactggtactggtttaccatttcaaagg
tattgtcatcatggagggaacctggaggaggtgagagttctacctcttga
tcctaaaggcagccaggaggaaactggatttcacactgggcagagcttga
acataggagacttcaaagcccacccacaggacacagtttctccacaagcc
aaacttctatagtgttactctcatgggccaaatattcaacacagatctct
ggggggcaaactattcaaatcacacaaagagctgtagcaatatgctgcga
caggagagagaactgtcttccctagagaaaggcctatagcttatctatct
catggaagccttatgcatataca

gaattctcagtcttctaacaaggctctatatgatggactgacatttcgtg
atatgtttagaaatatttttagcatcatgttccacttaatcattactaaa
gaaatttagtaacatcatattactaccacttatgaactgtcccactgaac
atgaaattctggttcacaggtgtaagttttattttgtactttgcaattat
taaagattttatgaaaataatgtctgtaaaacgtttattttgttatattt
taccaatgtattaaggagtcacaattttcaatggtggtgctttgaaaaag
gattttaaaacttggttttaagtttagttggtattaaaaaatttaactac
acaaatatgggtatcagggagcatacactgaagatcagaaatgattttga
tataaaataaatagtaagcataaaatacaaaacaaaatggcatataatgg
aataaaggaagaaacatgacttgtgagtaaatctcaagaagatgaagaca
gaaagaatgctagcagatgtcaggtttgaaggggaagactgggaaaatag
aggaaataagggtcctatgtgaagaattaatctaaaaataaagtgtgtga
aaaaagctatgggaaagcctactttcttacaaccaaaaccaaacatattt
ggagaaaataatggaattatgtaatatgaaaaaggaaggagaaactgtgg
gttaaagatttacatcaggatggcaatggatatgtgggagaatagagtgt
aggaagtaggttacccaaaagcaagaccatgagagaatattaaagaaacc
tgctagttagtaaaataattttaaaaaaacttttaaaatgcataggtgga
taatatagaagattaaacacatttgcattataaggcatgggatacctcca
tacacattattgatcaaggaactaacagaagtctccaaagaactcaactg
ttgccattgctctaggtttccctacccaacatatctacatatacacatga
cagaagatgccatatatattgctgcaaggcatggagtatcactattaaga
cagtagaaacatcttttcttgctgcctagattataagtgatagagtgttt
acctagatacttgggggataaaagacaacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_62204552_62205750
seq2: B6Ng01-328H14.b_45_1217

seq1  GAATTCCATGTAGGTCATCAGGACTGGAAGTCAAAATAAAAAGTTGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTAGGTCATCAGGACTGGAAGTCAAAATAAAAAGTTGGGCT  50

seq1  TGAAAATTGAAAACTGTATAGAAAAATAGTTGCAGAATGACCGTACTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTGAAAACTGTATAGAAAAATAGTTGCAGAATGACCGTACTTCT  100

seq1  GATTATGCAACTTGACTGCCTCTATATTTTCATGGCTCACAGGAAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGCAACTTGACTGCCTCTATATTTTCATGGCTCACAGGAAAAACC  150

seq1  GAGTGAGGTTCAGCAAGGACCAACATTAATACTGCACAAGGATGTAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGGTTCAGCAAGGACCAACATTAATACTGCACAAGGATGTAGCAT  200

seq1  GATATAAGACAGACAGACAAGAAAGCTTGGTTCACACATAAAAAAAACGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAGACAGACAGACAAGAAAGCTTGGTTCACACATAAAAAAAACGA  250

seq1  GTAGCAAAGTGACAAAAGCATGTGGAAGTTACAGAAACAGTGACTCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAAAGTGACAAAAGCATGTGGAAGTTACAGAAACAGTGACTCTGTT  300

seq1  TCTATATTTATTGTCTGGCTCTGATACAGTAATCTCACATCATTTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATTTATTGTCTGGCTCTGATACAGTAATCTCACATCATTTTCTTC  350

seq1  ATAAAACAACTTGCTCTCAAGCCACAGAGAGAACAAGAGAAAATGTGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACAACTTGCTCTCAAGCCACAGAGAGAACAAGAGAAAATGTGTCA  400

seq1  TCATCTAAGATGAAATAACAGAAAAACAAAGCAGAAAACTGAAGTTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAAGATGAAATAACAGAAAAACAAAGCAGAAAACTGAAGTTTCAG  450

seq1  GTTTTCTAAAATAGAATTTAAAGTATTTCATAGAGTTCAGATGAGTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTAAAATAGAATTTAAAGTATTTCATAGAGTTCAGATGAGTTTCA  500

seq1  GAATAGGCAGCTTCAACACTGCTTTCTCCTCTCAACATATAGACATAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGCAGCTTCAACACTGCTTTCTCCTCTCAACATATAGACATAGTT  550

seq1  TTCTGCAGCTACCTCACTGTGAGTCACACATGAACATAGAAGATACAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAGCTACCTCACTGTGAGTCACACATGAACATAGAAGATACAGCT  600

seq1  ACAACATTCAGGAGTCATGGAGATCCCCAACCCTTTCTACTACTTCCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATTCAGGAGTCATGGAGATCCCCAACCCTTTCTACTACTTCCTTA  650

seq1  ATGGCATTCTTAATTTGTAACCAATGACAATCTATAAAATGATAATATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATTCTTAATTTGTAACCAATGACAATCTATAAAATGATAATATCA  700

seq1  ACTAACATTCCAAGGTAGATTAGGAAGCTCACAAGATCTCATACCTAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACATTCCAAGGTAGATTAGGAAGCTCACAAGATCTCATACCTAAAT  750

seq1  GAAGAGTGCCTTAGTGATTTAATGTTGTGAAGAGACACCATGACCAAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTGCCTTAGTGATTTAATGTTGTGAAGAGACACCATGACCAAGGC  800

seq1  AACCCTTATATAAAAACCACTCAACTGGTACTGGTTTACCATTTCAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTATATAAAAACCACTCAACTGGTACTGGTTTACCATTTCAAAGG  850

seq1  TATTGTCATCATGGAGGGAACCTGGAGGAGGTGAGAGTTCTACCTCTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCATCATGGAGGGAACCTGGAGGAGGTGAGAGTTCTACCTCTTGA  900

seq1  TCCTAAAGGCAGCCAGGAGGAAACTGGATTTCACACTGGGCAGAGCTTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAAGGCAGCCAGGAGGAAACTGGATTTCACACTGGGCAGAGCTTGA  950

seq1  ACATAGGAGACTTCAAAGCCCACCCCACAGGGACACAGTTTCTCCAACAA  1000
      |||||||||||||||||||||| |||||| ||||||||||||||| ||||
seq2  ACATAGGAGACTTCAAAGCCCA-CCCACA-GGACACAGTTTCTCC-ACAA  997

seq1  GGCCAAACCTTCTAATAGTGTTACTCTCCATGGGCCAAATATTCAAACAC  1050
       |||||| ||||| ||||||||||||| |||||||||||||||| |||||
seq2  -GCCAAA-CTTCT-ATAGTGTTACTCT-CATGGGCCAAATATTC-AACAC  1042

seq1  AAGAATCTCTGGGGGGCAAACCTATTCAAATCACCACAAAGAGCTGTAGG  1100
      |   |||||||||||||||| |||||||||||| |||||||||||||| |
seq2  A--GATCTCTGGGGGGCAAA-CTATTCAAATCA-CACAAAGAGCTGTA-G  1087

seq1  CAATTAATGGCTGCGACAGGAGAGAGAACTGGTCTTCCCTAGAGAAAAGC  1150
      ||||  || ||||||||||||||||||||| |||||||||||||||| ||
seq2  CAAT--AT-GCTGCGACAGGAGAGAGAACT-GTCTTCCCTAGAGAAAGGC  1133

seq1  CCTTAATAGCTTATCCTATCCTCAATGGACAGCCCTAAATGCATATACA  1199
      |    ||||||||| |||| ||| ||||| |||| |  |||||||||||
seq2  C---TATAGCTTAT-CTAT-CTC-ATGGA-AGCCTT--ATGCATATACA  1173


seq1: chr8_62336232_62337369
seq2: B6Ng01-328H14.g_64_1194 (reverse)

seq1  CTGTTGTCTTTTATCCCCCAAGTAATCTATGT-AACACTTCTATCACTTT  49
      ||||||||||||||||||||||| ||||| || ||||| |||||||| ||
seq2  CTGTTGTCTTTTATCCCCCAAGT-ATCTAGGTAAACAC-TCTATCAC-TT  47

seq1  ATAATCTAGCCAGCAAG-AAAGATGTTTCCTACTTGTCTTAATAGTGATT  98
      ||||||||| ||||||| |||||||||| |||| |||||||||||||| |
seq2  ATAATCTAGGCAGCAAGAAAAGATGTTT-CTAC-TGTCTTAATAGTGA-T  94

seq1  ACTCCATGCCCTGCAGCCAATATATATGGCATCTTCTGTCATGTGTATAT  148
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  ACTCCATGCCTTGCAG-CAATATATATGGCATCTTCTGTCATGTGTATAT  143

seq1  GTAGATATGTTGGGTAGGGAAACCTAGAGCAATGGCAACAGTTTGAGTTC  198
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTAGATATGTTGGGTAGGGAAACCTAGAGCAATGGCAACAG-TTGAGTTC  192

seq1  TTTTGGAGACTTCTGTTAGTTCCTTGATCAATAATGTGTATGGAGGTATC  248
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTGGAGACTTCTGTTAGTTCCTTGATCAATAATGTGTATGGAGGTATC  241

seq1  CCATGCCTTATAATGCAAATGTGTTTAATCTTCTATATTATCCACCTATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCTTATAATGCAAATGTGTTTAATCTTCTATATTATCCACCTATG  291

seq1  CATTTTAAAAGTTTTTTTAAAATTATTTTACTAACTAGCAGGTTTCTTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAAAGTTTTTTTAAAATTATTTTACTAACTAGCAGGTTTCTTTA  341

seq1  ATATTCTCTCATGGTCTTGCTTTTGGGTAACCTACTTCCTACACTCTATT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTCTCATGGTCTTGCTTTTGGGTAACCTACTTCCTACACTCTATT  391

seq1  CTCCCACATATCCATTGCCATCCTGATGTAAATCTTTAACCCACAGTTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACATATCCATTGCCATCCTGATGTAAATCTTTAACCCACAGTTTC  441

seq1  TCCTTCCTTTTTCATATTACATAATTCCATTATTTTCTCCAAATATGTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTTTTCATATTACATAATTCCATTATTTTCTCCAAATATGTTT  491

seq1  GGTTTTGGTTGTAAGAAAGTAGGCTTTCCCATAGCTTTTTTCACACACTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGGTTGTAAGAAAGTAGGCTTTCCCATAGCTTTTTTCACACACTT  541

seq1  TATTTTTAGATTAATTCTTCACATAGGACCCTTATTTCCTCTATTTTCCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAGATTAATTCTTCACATAGGACCCTTATTTCCTCTATTTTCCC  591

seq1  AGTCTTCCCCTTCAAACCTGACATCTGCTAGCATTCTTTCTGTCTTCATC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCCCTTCAAACCTGACATCTGCTAGCATTCTTTCTGTCTTCATC  641

seq1  TTCTTGAGATTTACTCACAAGTCATGTTTCTTCCTTTATTCCATTATATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAGATTTACTCACAAGTCATGTTTCTTCCTTTATTCCATTATATG  691

seq1  CCATTTTGTTTTGTATTTTATGCTTACTATTTATTTTATATCAAAATCAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGTTTTGTATTTTATGCTTACTATTTATTTTATATCAAAATCAT  741

seq1  TTCTGATCTTCAGTGTATGCTCCCTGATACCCATATTTGTGTAGTTAAAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATCTTCAGTGTATGCTCCCTGATACCCATATTTGTGTAGTTAAAT  791

seq1  TTTTTAATACCAACTAAACTTAAAACCAAGTTTTAAAATCCTTTTTCAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATACCAACTAAACTTAAAACCAAGTTTTAAAATCCTTTTTCAAA  841

seq1  GCACCACCATTGAAAATTGTGACTCCTTAATACATTGGTAAAATATAACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACCATTGAAAATTGTGACTCCTTAATACATTGGTAAAATATAACA  891

seq1  AAATAAACGTTTTACAGACATTATTTTCATAAAATCTTTAATAATTGCAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACGTTTTACAGACATTATTTTCATAAAATCTTTAATAATTGCAA  941

seq1  AGTACAAAATAAAACTTACACCTGTGAACCAGAATTTCATGTTCAGTGGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAAATAAAACTTACACCTGTGAACCAGAATTTCATGTTCAGTGGG  991

seq1  ACAGTTCATAAGTGGTAGTAATATGATGTTACTAAATTTCTTTAGTAATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCATAAGTGGTAGTAATATGATGTTACTAAATTTCTTTAGTAATG  1041

seq1  ATTAAGTGGAACATGATGCTAAAAATATTTCTAAACATATCACGAAATGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGGAACATGATGCTAAAAATATTTCTAAACATATCACGAAATGT  1091

seq1  CAGTCCATCATATAGAGCCTTGTTAGAAGACTGAGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCATCATATAGAGCCTTGTTAGAAGACTGAGAATTC  1131


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