BAC Information

Click to search

BAC

Clone NameB6Ng01-328L24
Chromosome8 (Build37)
Map Location 11,382,205 - 11,382,902
singlet/doubletsinglet
Overlap geneCol4a2
Upstream geneMyo16, LOC100040008, LOC384782, LOC100040507, LOC665306, Irs2, Col4a1
Downstream geneRab20, 0710008K08Rik, Cars2, Ing1, Ankrd10, 1700016D06Rik, EG665271, LOC665363, LOC624710, LOC665373, Arhgef7, 1700018L24Rik, LOC100040155, LOC100040175
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328L24.bB6Ng01-328L24.g
ACCGA115923GA115924
length6981,224
definitionB6Ng01-328L24.b B6Ng01-328L24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcagaaatccattcaaagtcacgataggaatttcccttccac
cccacttctcttgagagagagcacagcaggcagtcgctgccggcaggtga
gaacgcaatgacatcagccttagatctgctgttccttaagaacaggtctg
taaactgcacaagcagatctcagagaagcgaccttgtaaatgcgagaatg
ttctgtggttttattttttggttcaagccaagcccctgaattctccaagt
cctgagccttgccagccacaggctgaccaacatgactaatgcaagttacc
cacggtcttaccatccttgggcataaagccgctccagctggagcaagcct
gccaagcgtgcagggagccctgctaacggtacatgacagtcggagggctt
tggaaacattccccgagccagctgtctatccacccccacagttgtctgtc
tggagataaggctcccatgctggtcactcagagatgcgtcacaggagtct
tggatgctgctcccagcagagctctgccaggcaggtccacagagaggtgg
cctgtgctgacccggaaccaaaaagccacccccacagtgtcctgagctat
cctttgcctctgtgttccagatctgtcattcattcaaatgggtcattagg
gatgggctctttgtttgtgggagcttgcttagtgtggggggggggggg

gaattctgttttccagaattgtgctgtgcttaaatggttaaagcctggtt
caggctctgtactggctagttgtgtgtcaacttgacacagctggagttat
tacagaataaggagcttcagctgaggaaatacctccatgagatccagctg
taaggcattttctcaattagtgatcaagggggagaggccccttgtgggtg
ggaccatctctggtgtggcactgacatcactggcctggtagtctactatc
ttgggttctataagagagcaggctgagcaaggcaggggaggcaagccagt
aaggaacatcccttcatggcctctgcatcagctcctgcttcctgacctgc
ttgggttccagtcctgacttccttggtgatgaacagcagtatggaagtgt
aagctgaataaaccctttcctccccaacttgcttcttggtcatgatgttt
gtccaggaatagaaaccctgactaagacaggctctaagaagtcttggccc
agcagtagttaccagaattgagctgatctgagtctccctgttcagccctg
acactgagcgtctccctgcctgctggaaagcctgcaggagcctcccacac
aactgcatccctgcacgaggaggcaaaagcgcagacagtgcttccgggtc
acaggaaaatgctccacctgcttgcctactgccgatcttatggaggcatt
ttctctattcaagctccctcctttctgatgactctagcttgtggtgtcaa
gttgacataaaactctcagcacactaagaaatgtgcctgggtaagaagca
tacattatgtctggcaatggcccaagttcaaaagactcctaagcaaggtc
cgggcccatgagcctcagagaagcccatttccttccttaacaaagatcag
cctgcttgctgtgactctggctttactgttaacccacagggtgctgcaat
tcagatcttaggtccatttctgatttcatggtctttggcatggtgacacc
agggtcttcttctagttttccccggttacagcagagtagcagcccagcta
caccttaagacactggaaagggcttgccacagtggagcatgcttcttctt
agaaggatggagccaacggctcctgggagcaagagcttctgggaagggtt
ggtggtgaaccttagagcccactctaagaaccaggccttaacagttaagg
tacacacgcgctctgtgatgggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_11382205_11382902
seq2: B6Ng01-328L24.b_50_747

seq1  GAATTCCATCAGAAATCCATTCAAAGTCACGATAGGAATTTCCCTTCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCAGAAATCCATTCAAAGTCACGATAGGAATTTCCCTTCCAC  50

seq1  CCCACTTCTCTTGAGAGAGAGCACAGCAGGCAGTCGCTGCCGGCAGGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTCTCTTGAGAGAGAGCACAGCAGGCAGTCGCTGCCGGCAGGTGA  100

seq1  GAACGCAATGACATCAGCCTTAGATCTGCTGTTCCTTAAGAACAGGTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGCAATGACATCAGCCTTAGATCTGCTGTTCCTTAAGAACAGGTCTG  150

seq1  TAAACTGCACAAGCAGATCTCAGAGAAGCGACCTTGTAAATGCGAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGCACAAGCAGATCTCAGAGAAGCGACCTTGTAAATGCGAGAATG  200

seq1  TTCTGTGGTTTTATTTTTTGGTTCAAGCCAAGCCCCTGAATTCTCCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGTTTTATTTTTTGGTTCAAGCCAAGCCCCTGAATTCTCCAAGT  250

seq1  CCTGAGCCTTGCCAGCCACAGGCTGACCAACATGACTAATGCAAGTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCCTTGCCAGCCACAGGCTGACCAACATGACTAATGCAAGTTACC  300

seq1  CACGGTCTTACCATCCTTGGGCATAAAGCCGCTCCAGCTGGAGCAAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTCTTACCATCCTTGGGCATAAAGCCGCTCCAGCTGGAGCAAGCCT  350

seq1  GCCAAGCGTGCAGGGAGCCCTGCTAACGGTACATGACAGTCGGAGGGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCGTGCAGGGAGCCCTGCTAACGGTACATGACAGTCGGAGGGCTT  400

seq1  TGGAAACATTCCCCGAGCCAGCTGTCTATCCACCCCCACAGTTGTCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACATTCCCCGAGCCAGCTGTCTATCCACCCCCACAGTTGTCTGTC  450

seq1  TGGAGATAAGGCTCCCATGCTGGTCACTCAGAGATGCGTCACAGGAGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATAAGGCTCCCATGCTGGTCACTCAGAGATGCGTCACAGGAGTCT  500

seq1  TGGATGCTGCTCCCAGCAGAGCTCTGCCAGGCAGGTCCACAGAGAGGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTGCTCCCAGCAGAGCTCTGCCAGGCAGGTCCACAGAGAGGTGG  550

seq1  CCTGTGCTGACCCGGAACCAAAAAGCCACCCCCACAGTGTCCTGAGCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCTGACCCGGAACCAAAAAGCCACCCCCACAGTGTCCTGAGCTAT  600

seq1  CCTTTGCCTCTGTGTTCCAGATCTGTCATTCATTCAAATGGGTCATTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCCTCTGTGTTCCAGATCTGTCATTCATTCAAATGGGTCATTAGG  650

seq1  GATGGGCTCTTTGTTTGTGGGAGCTTGCTTAGTGTGGGGGGGGGGGGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCTCTTTGTTTGTGGGAGCTTGCTTAGTGTGGGGGGGGGGGGG  698


| Home | SequenceCutter | Blast | Download |