BAC Information

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BAC

Clone NameB6Ng01-328O09
Chromosome8 (Build37)
Map Location 31,810,762 - 31,952,972
singlet/doubletdoublet
Overlap genenone
Upstream geneEG628189
Downstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-328O09.bB6Ng01-328O09.g
ACCGA116034GA116035
length1,217550
definitionB6Ng01-328O09.b B6Ng01-328O09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,810,762 - 31,811,995)(31,952,417 - 31,952,972)
sequence
gaattctggagaaggttatggcaagtagcaccatcacatgcctgcagctg
gatgccatggtcactctgagattttctaagtcttgcaaaaagcagagtgg
atggaagatggaaggcgaggacacgctcaagctgttcactgattactgaa
ccactagaatttcccccaccccctgccaactaagcttcttttaacctcag
atttgcacgtacagcccaggttggtgcatcaaggtagctcagaagaaagt
ccaacatggtgctggctgagtgcatgtaaatggtcctgcctggctcccaa
tctcgtatcctcttgaaggagacgtcataaagtgtctttagaaaggagcg
ccaagggtttcaaagtggtaaggaggctttgaaagagcttcaggatcagt
gatgtgcttgccagaactgaagtgataatggagtgcatttgcttccacat
cctatagaccagccatacaaagaggacctccagccttgagacatgacctt
tgattgacagagggagcagatctgtcagaatccctaggagaaaatcaaag
agttctaaacttaacttcgttttctctcattcttttgtctggggagagtc
ctacattgattaaatccaatggaagacagagttaaaggcatctttgagtc
tatttttgttgcccaaacaccctgacaccagaattagaatacatagggat
agataaacctgccaaggtgccctgaagtttccataaagtttgatttagtt
tgcatttcagtatttctgggctatggtaccccaaggtttgtgagtgttac
atcatgacgaagacatcatgtatagtgttaacatccaagtcacatgagaa
acttccattgactaagaacagttgttttcaacatgtagaaatcattacgt
accccaataatattagattatatttctaacagagaaagtgatatggggac
tgtcaaatagaattggttgattttattttcaaacagttgcctgtagaaat
aaacatatgaacctagacctttgtaattctttattgttctacacgggaat
attttcacacttccttgtactcagtcatcatttaaataactactattctg
taattcgatcatggccagtagtataagggccaggagctgctagctcaaat
cataataaacaggcggtggctacgagtgggcgagctaagaaggccaggcc
tcatctcaccaatcatt

atgcaggctatggcaaggaagttttttatggattgtaggcaaagggaaat
gatgtgtctgccacaagctgggcttttgtccaactatagttacctaggta
ggaatttggaagacaggcaacttccaggaaggttgcaacagccatcagaa
atgcagagctgggcctttggtgcttttttcttctttgttcaccttctgtg
tgggcacggttagagagagactgaggaacggaccttgcggggaggtgggg
caagcccagtataacatcctgacatccttgggtgtgtggaggctggtcca
tgtctcactgcttcttgctgaaaggggacagcacagggtaggggagtcag
gagtcagtgggtgtgcccagtgctcagggagaattgtgggtgaagaagca
cctgtgtcacttttactggaaacgtctcaaatccatttccggagaaggtg
gaggaggcaaggtgtgaaaaagaaaaaaaaaagccaagtaagaatgaggg
atcttattactgggatggatcattgaaaagtgtttggggagggagggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_31810762_31811995
seq2: B6Ng01-328O09.b_46_1262

seq1  GAATTCTGGAGAAGGTTATGGCAAGTAGCACCATCACATGCCTGCAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAGAAGGTTATGGCAAGTAGCACCATCACATGCCTGCAGCTG  50

seq1  GATGCCATGGTCACTCTGAGATTTTCTAAGTCTTGCAAAAAGCAGAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCATGGTCACTCTGAGATTTTCTAAGTCTTGCAAAAAGCAGAGTGG  100

seq1  ATGGAAGATGGAAGGCGAGGACACGCTCAAGCTGTTCACTGATTACTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGATGGAAGGCGAGGACACGCTCAAGCTGTTCACTGATTACTGAA  150

seq1  CCACTAGAATTTCCCCCACCCCCTGCCAACTAAGCTTCTTTTAACCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAGAATTTCCCCCACCCCCTGCCAACTAAGCTTCTTTTAACCTCAG  200

seq1  ATTTGCACGTACAGCCCAGGTTGGTGCATCAAGGTAGCTCAGAAGAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCACGTACAGCCCAGGTTGGTGCATCAAGGTAGCTCAGAAGAAAGT  250

seq1  CCAACATGGTGCTGGCTGAGTGCATGTAAATGGTCCTGCCTGGCTCCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATGGTGCTGGCTGAGTGCATGTAAATGGTCCTGCCTGGCTCCCAA  300

seq1  TCTCGTATCCTCTTGAAGGAGACGTCATAAAGTGTCTTTAGAAAGGAGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGTATCCTCTTGAAGGAGACGTCATAAAGTGTCTTTAGAAAGGAGCG  350

seq1  CCAAGGGTTTCAAAGTGGTAAGGAGGCTTTGAAAGAGCTTCAGGATCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGTTTCAAAGTGGTAAGGAGGCTTTGAAAGAGCTTCAGGATCAGT  400

seq1  GATGTGCTTGCCAGAACTGAAGTGATAATGGAGTGCATTTGCTTCCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCTTGCCAGAACTGAAGTGATAATGGAGTGCATTTGCTTCCACAT  450

seq1  CCTATAGACCAGCCATACAAAGAGGACCTCCAGCCTTGAGACATGACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAGACCAGCCATACAAAGAGGACCTCCAGCCTTGAGACATGACCTT  500

seq1  TGATTGACAGAGGGAGCAGATCTGTCAGAATCCCTAGGAGAAAATCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGACAGAGGGAGCAGATCTGTCAGAATCCCTAGGAGAAAATCAAAG  550

seq1  AGTTCTAAACTTAACTTCGTTTTCTCTCATTCTTTTGTCTGGGGAGAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAAACTTAACTTCGTTTTCTCTCATTCTTTTGTCTGGGGAGAGTC  600

seq1  CTACATTGATTAAATCCAATGGAAGACAGAGTTAAAGGCATCTTTGAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTGATTAAATCCAATGGAAGACAGAGTTAAAGGCATCTTTGAGTC  650

seq1  TATTTTTGTTGCCCAAACACCCTGACACCAGAATTAGAATACATAGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGTTGCCCAAACACCCTGACACCAGAATTAGAATACATAGGGAT  700

seq1  AGATAAACCTGCCAAGGTGCCCTGAAGTTTCCATAAAGTTTGATTTAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAACCTGCCAAGGTGCCCTGAAGTTTCCATAAAGTTTGATTTAGTT  750

seq1  TGCATTTCAGTATTTCTGGGCTATGGTACCCCAAGGTTTGTGAGTGTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTCAGTATTTCTGGGCTATGGTACCCCAAGGTTTGTGAGTGTTAC  800

seq1  ATCATGACGAAGACATCATGTATAGTGTTAACATCCAAGTCACATGAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGACGAAGACATCATGTATAGTGTTAACATCCAAGTCACATGAGAA  850

seq1  ACTTCCATTGACTAAGAACAGTTGTTTTCAACATGTAGAAATCATTACGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCATTGACTAAGAACAGTTGTTTTCAACATGTAGAAATCATTACGT  900

seq1  ACCCCAATAATATTAGATTATATTTCTAACAGAGAAAGTGATATGGGGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAATAATATTAGATTATATTTCTAACAGAGAAAGTGATATGGGGAC  950

seq1  TGTCAAATAAGAATTGGTTGATTTTATTTTCAAACAGTTGCCTGTAGAAT  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||| 
seq2  TGTCAAAT-AGAATTGGTTGATTTTATTTTCAAACAGTTGCCTGTAGAA-  998

seq1  ATAAACAATATGAACCTAGACCTTTGTAATTCTTTA-TGTTCTACAC-GG  1048
      |||||| ||||||||||||||||||||||||||||| |||||||||| ||
seq2  ATAAAC-ATATGAACCTAGACCTTTGTAATTCTTTATTGTTCTACACGGG  1047

seq1  AATATTTTCAACACTTCC-TGTACTCAGTCATCATTTAAATAACTACTAT  1097
      ||||||||| |||||||| |||||||||||||||||||||||||||||||
seq2  AATATTTTC-ACACTTCCTTGTACTCAGTCATCATTTAAATAACTACTAT  1096

seq1  TCTGTATTTCCGATTCAATTGTCCAGTAGTAATAGGGCAGAAAGCTGCCT  1147
      |||||| || ||| |||  || |||||||||  |||||    ||||||  
seq2  TCTGTAATT-CGA-TCA--TGGCCAGTAGTATAAGGGCCAGGAGCTGC--  1140

seq1  TAAGCTCACAATCAT-ATAAACATGCGGTGGCTTACGAGTGGGCAGAGCC  1196
        |||||| |||||| ||||||| |||||||| ||||||||||| |||| 
seq2  -TAGCTCA-AATCATAATAAACAGGCGGTGGC-TACGAGTGGGC-GAGC-  1185

seq1  TAAAGAAAGGCCCAGCCACTCATCTCACCACAATCATT  1234
        |||||  | |||| | ||||||||||  ||||||||
seq2  -TAAGAA--GGCCAGGC-CTCATCTCAC--CAATCATT  1217


seq1: chr8_31952417_31952972
seq2: B6Ng01-328O09.g_70_625 (reverse)

seq1  CCCCCCTCCCTCCCCAAACACTTTTCAATGATCCATCCCAGTAATAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTCCCTCCCCAAACACTTTTCAATGATCCATCCCAGTAATAAGAT  50

seq1  CCCTCATTCTTACTTGGCTTTTTTTTTTCTTTTTCACACCTTGCCTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATTCTTACTTGGCTTTTTTTTTTCTTTTTCACACCTTGCCTCCTC  100

seq1  CACCTTCTCCGGAAATGGATTTGAGACGTTTCCAGTAAAAGTGACACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCTCCGGAAATGGATTTGAGACGTTTCCAGTAAAAGTGACACAGG  150

seq1  TGCTTCTTCACCCACAATTCTCCCTGAGCACTGGGCACACCCACTGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTTCACCCACAATTCTCCCTGAGCACTGGGCACACCCACTGACTC  200

seq1  CTGACTCCCCTACCCTGTGCTGTCCCCTTTCAGCAAGAAGCAGTGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCCCCTACCCTGTGCTGTCCCCTTTCAGCAAGAAGCAGTGAGACA  250

seq1  TGGACCAGCCTCCACACACCCAAGGATGTCAGGATGTTATACTGGGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAGCCTCCACACACCCAAGGATGTCAGGATGTTATACTGGGCTTG  300

seq1  CCCCACCTCCCCGCAAGGTCCGTTCCTCAGTCTCTCTCTAACCGTGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCTCCCCGCAAGGTCCGTTCCTCAGTCTCTCTCTAACCGTGCCCA  350

seq1  CACAGAAGGTGAACAAAGAAGAAAAAAGCACCAAAGGCCCAGCTCTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGGTGAACAAAGAAGAAAAAAGCACCAAAGGCCCAGCTCTGCAT  400

seq1  TTCTGATGGCTGTTGCAACCTTCCTGGAAGTTGCCTGTCTTCCAAATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGGCTGTTGCAACCTTCCTGGAAGTTGCCTGTCTTCCAAATTCC  450

seq1  TACCTAGGTAACTATAGTTGGACAAAAGCCCAGCTTGTGGCAGACACATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGGTAACTATAGTTGGACAAAAGCCCAGCTTGTGGCAGACACATC  500

seq1  ATTTCCCTTTGCCTACAATCCATAAAAAACTTCCTTGCCATAGCCTGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTTTGCCTACAATCCATAAAAAACTTCCTTGCCATAGCCTGCAT  550

seq1  GAATTC  556
      ||||||
seq2  GAATTC  556


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