BAC Information

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BAC

Clone NameB6Ng01-329M07
Chromosome8 (Build37)
Map Location 32,253,270 - 32,269,922
singlet/doubletdoublet
Overlap geneBC019943
Upstream geneEG628189, LOC547008, Dusp26, Rnf122
Downstream geneRbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-329M07.bB6Ng01-329M07.g
ACCGA116635GA116636
length1,0231,115
definitionB6Ng01-329M07.b B6Ng01-329M07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,268,908 - 32,269,922)(32,253,270 - 32,254,376)
sequence
gaattctgtggaatataaaaccaaaggaagaatttcctactagttaagta
tatggaaaatgggagctcgctcagtgggatggacatgaggagccgagttc
aacccatggttaaaactggagtcatcagtgagaagcgtgcactgctaatc
tcagcgggagggagggagggagggaggactaagcaggcagatcctagggc
ttcctaggcggcgagccagccaagcctccgaacaaaataggtgtcctgtc
agtctcaaacctgaattttataaagtctttgtagcttttgcttgttcgtt
ttgagcctctttttgctccaaatggttaaatagcattaaaagagctcagc
caagccgggcttggtggcgcacgcctttagtcccagcactcgggaggcag
aggcaggcggatttttgagttccaggccagcctggtctacagagtgagtt
acagaacagccagggttatacagagaaaccctgtctcaaaaaaaacaaaa
agaaactaaataaataataaaataaaagagctcagccttcgtaccagaac
ttaagagccctggggtaagacctaacaccctctaagctcatagccaactt
agttgggcatacaaggagtgaattacaatcagtcgctggcattacctagg
acagtaaagccaactgacacagctgcagatgcttgcttgccttaccttca
cctgcccctgggaacagtggtccaggagaatcaggcagtctgtggcttcc
tggagcattgtactcttagcggcctcggttgtggggatcgtatccctcga
tatatcacatatgagttttcaggaagagcctttcataagacctacaactc
ttgcagggaatttctagaattggtgaagaaaaagacttcatactccaaac
tgggaatggtaaactaagagacttggaacaggcatgggaaactgaagtca
aatgtttgctatctcattgctgaaacaagattaatcagactgctgtatca
tttggcctccaaaggtcctgtta
gaattccagagtaaaaaaaatgaagcactgaagacatgtgagcaattacg
ggaaaatcagggaaactccagacagaggctgggttttccaaaaaggaaga
agccatatcttgcgtagaagttttatagagtcacagcagagatgggggta
attgctataaggattggttagctctggctatcatgggtagatacagtggg
aggctctacattccaggcatgacttcttggcccaactagggagataatca
cacactgtttatgcgctgtccactaagttagggtgtgggtgtggggtccc
gttctgtccaacgttgactccacttttgtcagtttttgaccttggcggca
gttttagaaagctatctttacttagtttgttacaattaactgcattagaa
ggcaggagatgagctgggtataggtgtgccgcgtgcctttaatcccagca
ctgggaggcagaagcagatgaatctctgtgagttcgaggcctgcctggtc
tataaagccagttctagtacagccaaggttattacacagagaacgcctgc
ctcaaaagccaaaccaaaccaaaccaaacaaacaaaccaggaccttgtac
accttcctcaagggtgataaggggttctgtgggccaacccccactggccc
cgagctctgtccctcttatctgctcgtcatattgggctataagccctctt
acccatcttccctggggttccagaccctgccacttcaacccttaactttc
ctttgaactccaatctttgtcctgcaacatacatgaacagccttacctat
ttcaatgcactgtggagactgacagagggccacatgaatacaagtatggg
tccaacttgctgttttgctatgggttccacctcctcactatatacagagc
acagtccctgctcactagtattattcttcaaaataatttgatcccaaagc
agtcttttacaactaatgtttgtgatggtttgaatgaaatttggcccctg
tagacacagcaagttgccattattagaggtgtggccttgttgacgagtgt
gtcactgtgggggggggtggggcctttggaagattcaaagcctgggttca
gtgtcactctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32268908_32269922
seq2: B6Ng01-329M07.b_44_1066 (reverse)

seq1  TAACAGGAACTTTG--GGGCTAATGAT-CTGCAGTCTGTTTGGTCTTGTT  47
      |||||||| |||||  || | |||||| | |||||||| ||  ||||| |
seq2  TAACAGGACCTTTGGAGGCCAAATGATACAGCAGTCTGATTAATCTTG-T  49

seq1  TTCAGCAATGAGATAGCAAACATTTGACTTCAGTTTTCCCATGCCTGGTC  97
      ||||||||||||||||||||||||||||||||| ||||||||||||| ||
seq2  TTCAGCAATGAGATAGCAAACATTTGACTTCAG-TTTCCCATGCCTGTTC  98

seq1  CAAGTCTCCTAAGTTTAACATT-CCAGTTTGGAGTATGAAGTC-TTTTCT  145
      ||||||| || |||||| |||| |||||||||||||||||||| ||||||
seq2  CAAGTCT-CTTAGTTTACCATTCCCAGTTTGGAGTATGAAGTCTTTTTCT  147

seq1  TC-CCAATTCTAG-AATTCCCTGC-AGAGTTGT-GGTCTTACTGAAGGCT  191
      || |||||||||| |||||||||| |||||||| |||||||   ||||||
seq2  TCACCAATTCTAGAAATTCCCTGCAAGAGTTGTAGGTCTTATGAAAGGCT  197

seq1  C-TCCTG-AAACTCATATGTGATATATCGAGGGATACGATCCCCACAACC  239
      | ||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGAAAACTCATATGTGATATATCGAGGGATACGATCCCCACAACC  247

seq1  GAGGCCGCTAAGAGTACAATGCTCCAGGAAGCCACAGACTGCCTGATTCT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCGCTAAGAGTACAATGCTCCAGGAAGCCACAGACTGCCTGATTCT  297

seq1  CCTGGACCACTGTTCCCAGGGGCAGGTGAAGGTAAGGCAAGCAAGCATCT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACCACTGTTCCCAGGGGCAGGTGAAGGTAAGGCAAGCAAGCATCT  347

seq1  GCAGCTGTGTCAGTTGGCTTTACTGTCCTAGGTAATGCCAGCGACTGATT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGTGTCAGTTGGCTTTACTGTCCTAGGTAATGCCAGCGACTGATT  397

seq1  GTAATTCACTCCTTGTATGCCCAACTAAGTTGGCTATGAGCTTAGAGGGT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCACTCCTTGTATGCCCAACTAAGTTGGCTATGAGCTTAGAGGGT  447

seq1  GTTAGGTCTTACCCCAGGGCTCTTAAGTTCTGGTACGAAGGCTGAGCTCT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGTCTTACCCCAGGGCTCTTAAGTTCTGGTACGAAGGCTGAGCTCT  497

seq1  TTTATTTTATTATTTATTTAGTTTCTTTTTGTTTTTTTTGAGACAGGGTT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATTATTTATTTAGTTTCTTTTTGTTTTTTTTGAGACAGGGTT  547

seq1  TCTCTGTATAACCCTGGCTGTTCTGTAACTCACTCTGTAGACCAGGCTGG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTATAACCCTGGCTGTTCTGTAACTCACTCTGTAGACCAGGCTGG  597

seq1  CCTGGAACTCAAAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGACTAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAACTCAAAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGACTAA  647

seq1  AGGCGTGCGCCACCAAGCCCGGCTTGGCTGAGCTCTTTTAATGCTATTTA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGTGCGCCACCAAGCCCGGCTTGGCTGAGCTCTTTTAATGCTATTTA  697

seq1  ACCATTTGGAGCAAAAAGAGGCTCAAAACGAACAAGCAAAAGCTACAAAG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTGGAGCAAAAAGAGGCTCAAAACGAACAAGCAAAAGCTACAAAG  747

seq1  ACTTTATAAAATTCAGGTTTGAGACTGACAGGACACCTATTTTGTTCGGA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATAAAATTCAGGTTTGAGACTGACAGGACACCTATTTTGTTCGGA  797

seq1  GGCTTGGCTGGCTCGCCGCCTAGGAAGCCCTAGGATCTGCCTGCTTAGTC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGCTGGCTCGCCGCCTAGGAAGCCCTAGGATCTGCCTGCTTAGTC  847

seq1  CTCCCTCCCTCCCTCCCTCCCGCTGAGATTAGCAGTGCACGCTTCTCACT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCCTCCCTCCCTCCCGCTGAGATTAGCAGTGCACGCTTCTCACT  897

seq1  GATGACTCCAGTTTTAACCATGGGTTGAACTCGGCTCCTCATGTCCATCC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTCCAGTTTTAACCATGGGTTGAACTCGGCTCCTCATGTCCATCC  947

seq1  CACTGAGCGAGCTCCCATTTTCCATATACTTAACTAGTAGGAAATTCTTC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGCGAGCTCCCATTTTCCATATACTTAACTAGTAGGAAATTCTTC  997

seq1  CTTTGGTTTTATATTCCACAGAATTC  1015
      ||||||||||||||||||||||||||
seq2  CTTTGGTTTTATATTCCACAGAATTC  1023

seq1: chr8_32253270_32254376
seq2: B6Ng01-329M07.g_68_1182

seq1  GAATTCCAGAGTAAAAAAAATGAAGCACTGAAGACATGTGAGCAATTACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGTAAAAAAAATGAAGCACTGAAGACATGTGAGCAATTACG  50

seq1  GGAAAATCAGGGAAACTCCAGACAGAGGCTGGGTTTTCCAAAAAGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATCAGGGAAACTCCAGACAGAGGCTGGGTTTTCCAAAAAGGAAGA  100

seq1  AGCCATATCTTGCGTAGAAGTTTTATAGAGTCACAGCAGAGATGGGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATATCTTGCGTAGAAGTTTTATAGAGTCACAGCAGAGATGGGGGTA  150

seq1  ATTGCTATAAGGATTGGTTAGCTCTGGCTATCATGGGTAGATACAGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTATAAGGATTGGTTAGCTCTGGCTATCATGGGTAGATACAGTGGG  200

seq1  AGGCTCTACATTCCAGGCATGACTTCTTGGCCCAACTAGGGAGATAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTACATTCCAGGCATGACTTCTTGGCCCAACTAGGGAGATAATCA  250

seq1  CACACTGTTTATGCGCTGTCCACTAAGTTAGGGTGTGGGTGTGGGGTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTTTATGCGCTGTCCACTAAGTTAGGGTGTGGGTGTGGGGTCCC  300

seq1  GTTCTGTCCAACGTTGACTCCACTTTTGTCAGTTTTTGACCTTGGCGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTCCAACGTTGACTCCACTTTTGTCAGTTTTTGACCTTGGCGGCA  350

seq1  GTTTTAGAAAGCTATCTTTACTTAGTTTGTTACAATTAACTGCATTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGAAAGCTATCTTTACTTAGTTTGTTACAATTAACTGCATTAGAA  400

seq1  GGCAGGAGATGAGCTGGGTATAGGTGTGCCGCGTGCCTTTAATCCCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGATGAGCTGGGTATAGGTGTGCCGCGTGCCTTTAATCCCAGCA  450

seq1  CTGGGAGGCAGAAGCAGATGAATCTCTGTGAGTTCGAGGCCTGCCTGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGCAGAAGCAGATGAATCTCTGTGAGTTCGAGGCCTGCCTGGTC  500

seq1  TATAAAGCCAGTTCTAGTACAGCCAAGGTTATTACACAGAGAACGCCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGCCAGTTCTAGTACAGCCAAGGTTATTACACAGAGAACGCCTGC  550

seq1  CTCAAAAGCCAAACCAAACCAAACCAAACAAACAAACCAGGACCTTGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAGCCAAACCAAACCAAACCAAACAAACAAACCAGGACCTTGTAC  600

seq1  ACCTTCCTCAAGGGTGATAAGGGGTTCTGTGGGCCAACCCCCACTGGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCTCAAGGGTGATAAGGGGTTCTGTGGGCCAACCCCCACTGGCCC  650

seq1  CGAGCTCTGTCCCTCTTATCTGCTCGTCATATTGGGCTATAAGCCCTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCTCTGTCCCTCTTATCTGCTCGTCATATTGGGCTATAAGCCCTCTT  700

seq1  ACCCATCTTCCCTGGGGTTCCAGACCCTGCCACTTCAACCCTTAACTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCTTCCCTGGGGTTCCAGACCCTGCCACTTCAACCCTTAACTTTC  750

seq1  CTTTGAACTCCAATCTTTGTCCTGCAACATACATGAACAGCCTTACCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAACTCCAATCTTTGTCCTGCAACATACATGAACAGCCTTACCTAT  800

seq1  TTCAATGCACTGTGGAGACTGACAGAGGGCCACATGAATACAAGTATGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGCACTGTGGAGACTGACAGAGGGCCACATGAATACAAGTATGGG  850

seq1  TCCAACTTGCTGTTTTGCTATGGGTTCCACCTCCTCACTATATACAGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTTGCTGTTTTGCTATGGGTTCCACCTCCTCACTATATACAGAGC  900

seq1  ACAGTCCCTGCTCACTAGTA-TATTCTTCAAAATAA-TTGATCCCAAAGC  948
      |||||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  ACAGTCCCTGCTCACTAGTATTATTCTTCAAAATAATTTGATCCCAAAGC  950

seq1  AGTC-TTTACAACTAATGTTTGTGATGGTTTGAATGAAA-TTGGCCCCTG  996
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGTCTTTTACAACTAATGTTTGTGATGGTTTGAATGAAATTTGGCCCCTG  1000

seq1  TAGACACAGCAAG-TGCCATTATTAGGAGGTGTGGCCTTGTTGAAGGAAG  1045
      ||||||||||||| ||||||||||| |||||||||||||||||| |  ||
seq2  TAGACACAGCAAGTTGCCATTATTA-GAGGTGTGGCCTTGTTGACG--AG  1047

seq1  TGTGTCACTGT---GGGGGGTGGG--CTTT-GAGGTTTCCAAAGCTGGTT  1089
      |||||||||||   ||||||||||  |||| || | ||| ||  |||| |
seq2  TGTGTCACTGTGGGGGGGGGTGGGGCCTTTGGAAGATTCAAAGCCTGGGT  1097

seq1  TCAGTGTCACTCTCTCTC  1107
      ||||||||||||||||||
seq2  TCAGTGTCACTCTCTCTC  1115