BAC Information

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BAC

Clone NameB6Ng01-330P04
Chromosome8 (Build37)
Map Location 75,620,505 - 75,752,788
singlet/doubletdoublet
Overlap geneLarge
Upstream geneOlfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3
Downstream geneLOC100039001, LOC666134, Crry-ps, LOC666146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-330P04.bB6Ng01-330P04.g
ACCGA117455GA117456
length1,168369
definitionB6Ng01-330P04.b B6Ng01-330P04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,620,505 - 75,621,680)(75,752,414 - 75,752,788)
sequence
gaattcactttgtagaccaggctggccttgaactcagaaattgcttgcct
ctacctcccaagtgctgggattaaaggtgtgtgccaccacgcccagctga
atcaggatttttgccatgttgcctgctattctctaattcttgggttctaa
cagtcctctgacttcaggccactactgaaaaagccaagcatttttagaac
ctgacaagtcacatatactatttcttcccttagtggctggctttatttcg
aactattacacaagttagcaagccaaggctcagacccaaatacacagctt
tttttttttttttttggtggaagacaagtatttgaaaataaaatataggg
attgccctctccccaagtttttttgtttgtttgttttttgtttttgtttt
tggagacagaatctccctatatacttcaggttctcttagagatagatatc
ctcctgccctagatcccagttttctgcaattacagaaatgtgctgcccta
tctggctccctctgtgtctctaaaggagcgataagttgactgggacaggg
cagggaggaagtgccttgataagtgtggaggcagaggcagctctgctcct
cctctctggtttcatatccccatggtattgccactaagaccctgggagat
aagattggcttgccttttaccttaattactacagtaatttgctaaatttt
gttgttacggttttaagagtgttaatcaattttagctcagaatagattgg
aattgcacataaattatgacaatcaccaaatgcaaaattctgaatatctc
gatcaacctctgagcctgaaatatgtgaaaatcagaaactctagccttta
tcaacatgatccatttaaaatgctactactctgaaatgcaattataatgg
ctttgtggctcttagaagaacatctttccaaaatcagccccaggcctagg
agcctcgtccttcccaaggtgatcagaaaacaaaggccaagtgttccttt
aaagctgttaatcttttaactatagcagcgtgctaaacttgctagtatgg
tgagacacctacatgcaccacctactatgtacgaaaagctctcggcttac
ttattttattaagaaaccactgcttgactcatgcaagctctgtatacatc
aattaacacaatggtcat
aaagttctggcttcataggggagcaggcttaatcatcagatagagattga
ccaatcacaggataaagagctcttgtttgacagggttggaaccagatttc
agagattttcagatttggggatatttgcatataaacagtgaagtctccat
tgtgggggagtctaaggaggaggtgaggaggtgaatttatattttggtgc
tttgtacatactatatacatatagcctacaggtaagttttgtagtaattc
tcttcctgatacaaaggcaggttatcacaccaacactcatatttttaagc
atttgggatatttggattaggatgtttcatctgtgtatagcaagtatctt
tatagtctgatgctgtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_75620505_75621680
seq2: B6Ng01-330P04.b_49_1216

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATTGCTTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATTGCTTGCCT  50

seq1  CTACCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCACCACGCCCAGCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCCCAAGTGCTGGGATTAAAGGTGTGTGCCACCACGCCCAGCTGA  100

seq1  ATCAGGATTTTTGCCATGTTGCCTGCTATTCTCTAATTCTTGGGTTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGATTTTTGCCATGTTGCCTGCTATTCTCTAATTCTTGGGTTCTAA  150

seq1  CAGTCCTCTGACTTCAGGCCACTACTGAAAAAGCCAAGCATTTTTAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTCTGACTTCAGGCCACTACTGAAAAAGCCAAGCATTTTTAGAAC  200

seq1  CTGACAAGTCACATATACTATTTCTTCCCTTAGTGGCTGGCTTTATTTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAAGTCACATATACTATTTCTTCCCTTAGTGGCTGGCTTTATTTCG  250

seq1  AACTATTACACAAGTTAGCAAGCCAAGGCTCAGACCCAAATACACAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTACACAAGTTAGCAAGCCAAGGCTCAGACCCAAATACACAGCTT  300

seq1  TTTTTTTTTTTTTTTGGTGGAAGACAAGTATTTGAAAATAAAATATAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTGGTGGAAGACAAGTATTTGAAAATAAAATATAGGG  350

seq1  ATTGCCCTCTCCCCAAGTTTTTTTGTTTGTTTGTTTTTTGTTTTTGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCCTCTCCCCAAGTTTTTTTGTTTGTTTGTTTTTTGTTTTTGTTTT  400

seq1  TGGAGACAGAATCTCCCTATATACTTCAGGTTCTCTTAGAGATAGATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAGAATCTCCCTATATACTTCAGGTTCTCTTAGAGATAGATATC  450

seq1  CTCCTGCCCTAGATCCCAGTTTTCTGCAATTACAGAAATGTGCTGCCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCCCTAGATCCCAGTTTTCTGCAATTACAGAAATGTGCTGCCCTA  500

seq1  TCTGGCTCCCTCTGTGTCTCTAAAGGAGCGATAAGTTGACTGGGACAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTCCCTCTGTGTCTCTAAAGGAGCGATAAGTTGACTGGGACAGGG  550

seq1  CAGGGAGGAAGTGCCTTGATAAGTGTGGAGGCAGAGGCAGCTCTGCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGAAGTGCCTTGATAAGTGTGGAGGCAGAGGCAGCTCTGCTCCT  600

seq1  CCTCTCTGGTTTCATATCCCCATGGTATTGCCACTAAGACCCTGGGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTGGTTTCATATCCCCATGGTATTGCCACTAAGACCCTGGGAGAT  650

seq1  AAGATTGGCTTGCCTTTTACCTTAATTACTACAGTAATTTGCTAAATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGGCTTGCCTTTTACCTTAATTACTACAGTAATTTGCTAAATTTT  700

seq1  GTTGTTACGGTTTTAAGAGTGTTAATCAATTTTAGCTCAGAATAGATTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTACGGTTTTAAGAGTGTTAATCAATTTTAGCTCAGAATAGATTGG  750

seq1  AATTGCACATAAATTATGACAATCACCAAATGCAAAATTCTGAATATCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCACATAAATTATGACAATCACCAAATGCAAAATTCTGAATATCTC  800

seq1  GATCAACCTCTGAGCCTGAAATATGTGAAAATCAGAAACTCTAGCCTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACCTCTGAGCCTGAAATATGTGAAAATCAGAAACTCTAGCCTTTA  850

seq1  TCAACATGATCCATTTAAAATGCTACTACTCTGAAATGCAATTATAATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATGATCCATTTAAAATGCTACTACTCTGAAATGCAATTATAATGG  900

seq1  CTTTGTGGCTCTTAGAAGAAACATCTTTCCAAAATCAGCCCCAGGCCTAG  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTTGTGGCTCTTAGAAG-AACATCTTTCCAAAATCAGCCCCAGGCCTAG  949

seq1  GAGCCTCGTCCTTCCCAAGGTGATCAGAAACAAAAGGCCAAAGTGTTCCT  1000
      ||||||||||||||||||||||||||||||  ||||||| ||||||||||
seq2  GAGCCTCGTCCTTCCCAAGGTGATCAGAAAACAAAGGCC-AAGTGTTCCT  998

seq1  TTAAAGCTGTTAATTCCTTTAACTATAGCAGCGTGCTAAACTTGCTAGTA  1050
      ||||||||||||| || |||||||||||||||||||||||||||||||||
seq2  TTAAAGCTGTTAA-TCTTTTAACTATAGCAGCGTGCTAAACTTGCTAGTA  1047

seq1  T-GTGAGACACCTACCATGCACCACCTACTATGTACCGAAAAAAGCTCTC  1099
      | |||||||||||| |||||||||||||||||||||    ||||||||||
seq2  TGGTGAGACACCTA-CATGCACCACCTACTATGTAC---GAAAAGCTCTC  1093

seq1  GGC-TACTTATTTTATTAAAGAAACACTGCTAGACTCCATTGGCAGGCTC  1148
      ||| |||||||||||||||  || ||||||| |||| |||  ||| ||||
seq2  GGCTTACTTATTTTATTAAGAAACCACTGCTTGACT-CAT--GCAAGCTC  1140

seq1  TGTATTACATC-ATTAACACAATAGTCAT  1176
      |||| |||||| ||||||||||| |||||
seq2  TGTA-TACATCAATTAACACAATGGTCAT  1168

seq1: chr8_75752414_75752788
seq2: B6Ng01-330P04.g_67_441 (reverse)

seq1  TATACAGCATCAGACTATAAAGATACTTGCTATACACAGATGAAACATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGCATCAGACTATAAAGATACTTGCTATACACAGATGAAACATCC  50

seq1  TAATCCAAATATCCCAAATGCTTAAAAATATGAGTGTTGGTGTGATAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCAAATATCCCAAATGCTTAAAAATATGAGTGTTGGTGTGATAACC  100

seq1  TGCCTTTGTATCAGGAAGAGAATTACTACAAAACTTACCTGTAGGCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTGTATCAGGAAGAGAATTACTACAAAACTTACCTGTAGGCTATA  150

seq1  TGTATATAGTATGTACAAAGCACCAAAATATAAATTCACCTCCTCACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATAGTATGTACAAAGCACCAAAATATAAATTCACCTCCTCACCTC  200

seq1  CTCCTTAGACTCCCCCACAATGGAGACTTCACTGTTTATATGCAAATATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAGACTCCCCCACAATGGAGACTTCACTGTTTATATGCAAATATC  250

seq1  CCCAAATCTGAAAATCTCTGAAATCTGGTTCCAACCCTGTCAAACAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATCTGAAAATCTCTGAAATCTGGTTCCAACCCTGTCAAACAAGAG  300

seq1  CTCTTTATCCTGTGATTGGTCAATCTCTATCTGATGATTAAGCCTGCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATCCTGTGATTGGTCAATCTCTATCTGATGATTAAGCCTGCTCC  350

seq1  CCTATGAAGCCAGAACTTTGAATTC  375
      |||||||||||||||||||||||||
seq2  CCTATGAAGCCAGAACTTTGAATTC  375