BAC Information

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BAC

Clone NameB6Ng01-331C06
Chromosome8 (Build37)
Map Location 68,376,867 - 68,378,034
singlet/doubletsinglet
Overlap geneMarch1, LOC100040986
Upstream geneLOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331C06.bB6Ng01-331C06.g
ACCGA117593GA117594
length1,172970
definitionB6Ng01-331C06.b B6Ng01-331C06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactttctaattgtttgcaaataaaaccaactagttgccttttt
ttttttctttttactgtttttctgaggcagcaactgtttcatcacattgt
tttatgaggcaataatatagtgtctaaacagaaaaactcagggcacaaat
aatttatcccattgaataacaaagagatttccatgaataaatcaggaaac
caaattacttttcttgtgggccaggaccaaatgtgacacttataactgca
ataaaagccatgattaatgacgtctgaatgtcaaaggcctgaatatttga
cataaaattattaaatatctagaaactcataaaataagctgtgcctcaaa
caagcagtttgaacttctttttatacggcttctaatacccattgcacctg
gacatttgatttatctgtttttaaatatatccaaaactatatgagtttcc
agtatttctaacaaaaaaatatgaatttttactaccaatccaagtctaaa
aatggctgtttttactgaagtagtccttggagctgttgctaagaaacaag
ctttgaaaaacaaggacaaatcatcatgaaaatcccttgcttaaaaaatg
aagaaaaactgtgtaagcagccatttctctgaaaaactcacataaataaa
tgagtgctcccaggaccagcccatcccctgcttgttatactattagcatg
cactacattactccataagccctctactctgttttcatatctttatgaaa
tgttgtctgttaaacttaaaagaaattcagtttttaaatacaaagatctt
agtgtgggaatagagttcacaggccagtataccctatctaagccagtgcc
tacaggaaattacatatggtgctaggagatagcatatccacttatgtgaa
aagtcacactggaaactttgtccattgtaattactatagatactaagtaa
gaaaagtcacatttcccagaaccttctaaatttgcatatattagttcatt
ttttctttttggaaaaataattgctcacagtgggtgcactagtgacactg
aaattttctagtggtttgaaataatgttatagagtggtcagctgaaagaa
caggcaatttttaatagtgacaaatattagaatttgaccatcatgaatat
ggggcatacaaccttccatcac
gaattctttgtttacatctgtacccaattttgttgttgtttttttttttt
tttttttttttttttgctttttgtttgtttggttggttggttttgtcgag
acagggtttctctgtatagccctggctttcatggaactcactttgtagac
caggctggcctcgaactgagaaatctgcctgtctctgcctcccaagtgct
gggattataggtgtgtgccaccacagcccagctgtacccaatttttaata
gtgttgtttggttctctggagtataacttcttgagttctttgtatatatt
agatattgaacttctatcagatttaggattggtaaagattttattgtaat
ctgttggttggccttttgtcttattgacagtgttcttcgccttacagaag
atttgcaattttatgaggtcccatttgttaattcttgatcttacagtaca
agcccttgttgttctgttcggggaattttcccccatgctcatatgtttga
ggctcttccccactttctcctgtacaagtttcagtgtctctgattttatg
tggaagtccttgatccacttagagttgagctatgtccaagcagataagaa
tggatcaattcacattcttttacatgctaactgccagttaaaccagcacc
atttgttgaaaatgctgtcgtttttccactagatggttttagctcctttg
tcaaagatcaagtgacaacaggtgtgtgggatcatttcttggatttaaat
tctattttcattaatctacctgcctgtcactataccagtaccatgcagtt
ttttatcacaattgctctgtagtaaagcattaggtcaggcatgggggatt
ccaccagagggttctttttagttgttgagaatagatttgggtgtcctaag
ttttggtgcaaattgcccttttctaacctctggtgaagaattgaagttgg
aatttttgatgggggattgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68376867_68378034
seq2: B6Ng01-331C06.b_46_1217

seq1  GAATTCCACTTTCTAATTGTTTGCAAATAAAACCAACTAGTTGCCTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTTCTAATTGTTTGCAAATAAAACCAACTAGTTGCCTTTTT  50

seq1  TTTTTTCTTTTTACTGTTTTTCTGAGGCAGCAACTGTTTCATCACATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTTTACTGTTTTTCTGAGGCAGCAACTGTTTCATCACATTGT  100

seq1  TTTATGAGGCAATAATATAGTGTCTAAACAGAAAAACTCAGGGCACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGGCAATAATATAGTGTCTAAACAGAAAAACTCAGGGCACAAAT  150

seq1  AATTTATCCCATTGAATAACAAAGAGATTTCCATGAATAAATCAGGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATCCCATTGAATAACAAAGAGATTTCCATGAATAAATCAGGAAAC  200

seq1  CAAATTACTTTTCTTGTGGGCCAGGACCAAATGTGACACTTATAACTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTACTTTTCTTGTGGGCCAGGACCAAATGTGACACTTATAACTGCA  250

seq1  ATAAAAGCCATGATTAATGACGTCTGAATGTCAAAGGCCTGAATATTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGCCATGATTAATGACGTCTGAATGTCAAAGGCCTGAATATTTGA  300

seq1  CATAAAATTATTAAATATCTAGAAACTCATAAAATAAGCTGTGCCTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATTATTAAATATCTAGAAACTCATAAAATAAGCTGTGCCTCAAA  350

seq1  CAAGCAGTTTGAACTTCTTTTTATACGGCTTCTAATACCCATTGCACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGTTTGAACTTCTTTTTATACGGCTTCTAATACCCATTGCACCTG  400

seq1  GACATTTGATTTATCTGTTTTTAAATATATCCAAAACTATATGAGTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTGATTTATCTGTTTTTAAATATATCCAAAACTATATGAGTTTCC  450

seq1  AGTATTTCTAACAAAAAAATATGAATTTTTACTACCAATCCAAGTCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTCTAACAAAAAAATATGAATTTTTACTACCAATCCAAGTCTAAA  500

seq1  AATGGCTGTTTTTACTGAAGTAGTCCTTGGAGCTGTTGCTAAGAAACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTGTTTTTACTGAAGTAGTCCTTGGAGCTGTTGCTAAGAAACAAG  550

seq1  CTTTGAAAAACAAGGACAAATCATCATGAAAATCCCTTGCTTAAAAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAAACAAGGACAAATCATCATGAAAATCCCTTGCTTAAAAAATG  600

seq1  AAGAAAAACTGTGTAAGCAGCCATTTCTCTGAAAAACTCACATAAATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAACTGTGTAAGCAGCCATTTCTCTGAAAAACTCACATAAATAAA  650

seq1  TGAGTGCTCCCAGGACCAGCCCATCCCCTGCTTGTTATACTATTAGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTCCCAGGACCAGCCCATCCCCTGCTTGTTATACTATTAGCATG  700

seq1  CACTACATTACTCCATAAGCCCTCTACTCTGTTTTCATATCTTTATGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACATTACTCCATAAGCCCTCTACTCTGTTTTCATATCTTTATGAAA  750

seq1  TGTTGTCTGTTAAACTTAAAAGAAATTCAGTTTTTAAATACAAAGATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCTGTTAAACTTAAAAGAAATTCAGTTTTTAAATACAAAGATCTT  800

seq1  AGTGTGGGAATAGAGTTCACAGGCCAGTATACCCTATCTAAGCCAGTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGGAATAGAGTTCACAGGCCAGTATACCCTATCTAAGCCAGTGCC  850

seq1  TACAGGAAATTACATATGGTGCTAGGAGATAGCATATCCACTTATGTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAAATTACATATGGTGCTAGGAGATAGCATATCCACTTATGTGAA  900

seq1  AAGTCACACTGGAAACTTTGTCCATTGTAATTACTATAGATACTAAAGTA  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGTCACACTGGAAACTTTGTCCATTGTAATTACTATAGATACT-AAGTA  949

seq1  AGAAAAGTCACATTTCCCAGAACCTTCTAAAATTGCATATATTAGTTCA-  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  AGAAAAGTCACATTTCCCAGAACCTTCTAAATTTGCATATATTAGTTCAT  999

seq1  TTTTTCTTTT--GGAAAATAATTGCTCACAGT-GGTGCACTAGTGACACT  1046
      ||||||||||  | |||||||||||||||||| |||||||||||||||||
seq2  TTTTTCTTTTTGGAAAAATAATTGCTCACAGTGGGTGCACTAGTGACACT  1049

seq1  G-AATTTTCTAAGTGGTTTGAAATAATGTATAAGAGTTGTCAGCTTGAAA  1095
      | |||||||| ||||||||||||||||||   ||||| |||||| |||||
seq2  GAAATTTTCT-AGTGGTTTGAAATAATGTTATAGAGTGGTCAGC-TGAAA  1097

seq1  G-ACAG--CATTTTTAATAGTGACAAATATTTAGATTTGAACACATTCAT  1142
      | ||||   ||||||||||||||||||||||   |||||| ||   ||||
seq2  GAACAGGCAATTTTTAATAGTGACAAATATTAGAATTTGACCA---TCAT  1144

seq1  G-ATATGGGG-ATACAACCTTCAATCAC  1168
      | |||||||| ||||||||||| |||||
seq2  GAATATGGGGCATACAACCTTCCATCAC  1172