BAC Information

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BAC

Clone NameB6Ng01-331E01
Chromosome8 (Build37)
Map Location 103,868,969 - 103,870,126
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331E01.b
ACCGA117675
length1,153
definitionB6Ng01-331E01.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgttctattgtactcctggtacaatgttttgaccatgtctgat
tatatagctcaactggagtggagaaaattacccagtaatttagaaaagaa
ttctttttcaaagcccacaggaatctgctcttcaatttagaaagaaattt
acagaatcaggttgtttgtgtgagttctaagtattgttttgacccaggtg
gcttgatatatcattcagccaaatatgattttatgtctgtctcttttcct
tcttttctgtgctatgaattcccatgaactcagaatattgtctgtaatat
caagtcttgaatttttttcctctgtaattctacactcaattttctgtgag
tttaagttgtaactataataaacaaggcttcccttgtaatgtgctttaaa
aatagagagaaacacttctatttttcaatagtgctgttcataggtattgc
cgttttgagaaaagagaaagaggcatgacaaatgtacatgtactgtacct
gttcaaatgtacaggtatatatgtatatgcctgtgctggttgataatgct
cagagctatttgtgaagtggagctttcaactgatcgatcttctttccctt
tgcatcctaaactccttcttcatttgccaattgcctgacactgttagaag
attgctgttggagattgggaaaggatctttacctatcctaaatcagatag
gggactaatatccaacatatataaagaactcaagaaggtggacttcagaa
aatcaaataaccccattaaaaaatggggctcagaactgaacaaagaattc
tcacctgaggaataccgaatggcagagaagcacctgaaaaaatgctcaac
atccttaatcatcagggaaatgcaaatcaaaacaaccctgagattccacc
tcacaccagtcagaatggctaagatcaaaattcaggtgacagcagatgct
ggcgtggatgtggagaaagaggacactcctccattgttggtgggattgca
gctgtacaccacttctgagatcagtctgcgttcctcagaaactggatata
gtacttactgagatcagccattacctctcctggccatatatccggaagaa
tggcccaactggttaggaggaacatggcttccactatgttttcaatgcag
cct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103868969_103870126
seq2: B6Ng01-331E01.b_47_1199 (reverse)

seq1  AGGCTGCTATG--AACATAGTGGA--GCATGTGTCCTTCTTACCAGTTGG  46
      |||||||  ||  |||||||||||   ||||| |||| || |||||||||
seq2  AGGCTGCATTGAAAACATAGTGGAAGCCATGT-TCCTCCTAACCAGTTGG  49

seq1  GGCA-TCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCGGT  95
      | || ||||| ||||||||| |||||||||||| ||   ||| ||| |  
seq2  GCCATTCTTCCGGATATATGGCCAGGAGAGGTAATGGCTGAT-CTCAGTA  98

seq1  AGTACTATATCCAGTTTTCTGAGGAACCGCCAGACTGATCTCCAGAGTGG  145
      |||||||||||||| ||||||||||||   ||||||||||||   |||||
seq2  AGTACTATATCCAG-TTTCTGAGGAAC--GCAGACTGATCTCAGAAGTGG  145

seq1  TTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTC  195
       ||||||   |||||||||||||||||||||||||||| |||||||||||
seq2  -TGTACA--GCTGCAATCCCACCAACAATGGAGGAGTG-TCCTCTTTCTC  191

seq1  CACATCCACGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATT  245
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CACATCCACGCCAGCATCTGCTGTCACCTGAA-TTTTGATCTTAGCCATT  240

seq1  CTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCT  290

seq1  GATGATTAAGGATGTTGAGCATTTTTTCAGGTGCTTCTCTGCCATTCGGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTAAGGATGTTGAGCATTTTTTCAGGTGCTTCTCTGCCATTCGGT  340

seq1  ATTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATG  390

seq1  GGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTT  440

seq1  GGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAAT  490

seq1  CTCCAACAGCAATCTTCTAACAGTGTCAGGCAATTGGCAAATGAAGAAGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACAGCAATCTTCTAACAGTGTCAGGCAATTGGCAAATGAAGAAGG  540

seq1  AGTTTAGGATGCAAAGGGAAAGAAGATCGATCAGTTGAAAGCTCCACTTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGGATGCAAAGGGAAAGAAGATCGATCAGTTGAAAGCTCCACTTC  590

seq1  ACAAATAGCTCTGAGCATTATCAACCAGCACAGGCATATACATATATACC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAGCTCTGAGCATTATCAACCAGCACAGGCATATACATATATACC  640

seq1  TGTACATTTGAACAGGTACAGTACATGTACATTTGTCATGCCTCTTTCTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATTTGAACAGGTACAGTACATGTACATTTGTCATGCCTCTTTCTC  690

seq1  TTTTCTCAAAACGGCAATACCTATGAACAGCACTATTGAAAAATAGAAGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAAAACGGCAATACCTATGAACAGCACTATTGAAAAATAGAAGT  740

seq1  GTTTCTCTCTATTTTTAAAGCACATTACAAGGGAAGCCTTGTTTATTATA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTCTATTTTTAAAGCACATTACAAGGGAAGCCTTGTTTATTATA  790

seq1  GTTACAACTTAAACTCACAGAAAATTGAGTGTAGAATTACAGAGGAAAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAACTTAAACTCACAGAAAATTGAGTGTAGAATTACAGAGGAAAAA  840

seq1  AATTCAAGACTTGATATTACAGACAATATTCTGAGTTCATGGGAATTCAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAGACTTGATATTACAGACAATATTCTGAGTTCATGGGAATTCAT  890

seq1  AGCACAGAAAAGAAGGAAAAGAGACAGACATAAAATCATATTTGGCTGAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGAAAAGAAGGAAAAGAGACAGACATAAAATCATATTTGGCTGAA  940

seq1  TGATATATCAAGCCACCTGGGTCAAAACAATACTTAGAACTCACACAAAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATATCAAGCCACCTGGGTCAAAACAATACTTAGAACTCACACAAAC  990

seq1  AACCTGATTCTGTAAATTTCTTTCTAAATTGAAGAGCAGATTCCTGTGGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGATTCTGTAAATTTCTTTCTAAATTGAAGAGCAGATTCCTGTGGG  1040

seq1  CTTTGAAAAAGAATTCTTTTCTAAATTACTGGGTAATTTTCTCCACTCCA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAAAGAATTCTTTTCTAAATTACTGGGTAATTTTCTCCACTCCA  1090

seq1  GTTGAGCTATATAATCAGACATGGTCAAAACATTGTACCAGGAGTACAAT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCTATATAATCAGACATGGTCAAAACATTGTACCAGGAGTACAAT  1140

seq1  AGAACATGAATTC  1158
      |||||||||||||
seq2  AGAACATGAATTC  1153


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