MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-332C07
Chromosome	8 (Build37)
Map Location	85,210,627 - 85,211,823
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Inpp4b, LOC671182, Il15, EG666564
Downstream gene	LOC675800, EG666289, Zfp330, Rnf150, LOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Inpp4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234515 MGI:2158925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC671182 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Il15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16168 MGI:103014
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666564 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666564 MGI:3644250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 Proteins pseudo : _no_value

name	LOC675800 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG666289 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666289 MGI:3647995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Zfp330 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30932 MGI:1353574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf150 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330812 MGI:2443860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039688 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039688
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Tbc1d9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71310 MGI:1918560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ucp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22227 MGI:98894
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elmod2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244548 MGI:2445165
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933434I20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67555 MGI:1914805
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clgn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12745 MGI:107472
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scoc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56367 MGI:1927654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC546077 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546077
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 177 ESTs, 6 Proteins pseudo : _no_value

name	LOC675854 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Olfr370 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258267 MGI:3030204
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufb7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66916 MGI:1914166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpsn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106529 MGI:1915408
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81489 MGI:1931874
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gipc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67903 MGI:1926252
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptger1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19216 MGI:97793
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pkn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320795 MGI:108022
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Inpp4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131212 GeneID:234515 MGI:2158925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol polyphosphate-4-phosphatase, type II transcript_id : NM_001024617.2

name	Il15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680406 GeneID:16168 MGI:103014
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 15 transcript_id : NM_008357.1

name	EG666289 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258959 GeneID:666289 MGI:3647995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG666289 transcript_id : XM_993407.2

name	Zfp330 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704207 GeneID:30932 MGI:1353574
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 330 transcript_id : NM_145600.1

name	Rnf150 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90991707 GeneID:330812 MGI:2443860
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 150 transcript_id : NM_177378.3

name	Tbc1d9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381882 GeneID:71310 MGI:1918560
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 9 transcript_id : NM_027758.2

name	Ucp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981931 GeneID:22227 MGI:98894
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uncoupling protein 1 (mitochondrial, proton carrier) transcript_id : NM_009463.2

name	Elmod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367620 GeneID:244548 MGI:2445165
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ELMO domain containing 2 transcript_id : NM_178736.4

name	4933434I20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119964703 GeneID:67555 MGI:1914805
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933434I20 gene transcript_id : NM_026233.2

name	Clgn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86262137 GeneID:12745 MGI:107472
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calmegin transcript_id : NM_009904.2

name	Scoc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687673 GeneID:56367 MGI:1927654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : short coiled-coil protein transcript_id : NM_001039137.2

name	Scoc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114687764 GeneID:56367 MGI:1927654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : short coiled-coil protein transcript_id : NM_019708.3

name	Olfr370 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129744 GeneID:258267 MGI:3030204
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 370 transcript_id : NM_146270.1

name	Ndufb7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354042 GeneID:66916 MGI:1914166
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 transcript_id : NM_025843.2

name	Gpsn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802387 GeneID:106529 MGI:1915408
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein, synaptic 2 transcript_id : NM_134118.2

name	Dnajb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9055241 GeneID:81489 MGI:1931874
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily B, member 1 transcript_id : NM_018808.1

name	Gipc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475640 GeneID:67903 MGI:1926252
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GIPC PDZ domain containing family, member 1 transcript_id : NM_018771.3

name	Ptger1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892046 GeneID:19216 MGI:97793
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prostaglandin E receptor 1 (subtype EP1) transcript_id : NM_013641.2

name	Pkn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32813438 GeneID:320795 MGI:108022
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase N1 transcript_id : NM_177262.3

name	Inpp4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71725387 CCDS:CCDS22446.1 GeneID:234515 MGI:2158925
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence ISS]; GO:0016316 - phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity [Evidence IEA] GO_process : GO:0048016 - inositol phosphate-mediated signaling [Evidence ISS] codon_start : 1 note : inositol polyphosphate 4-phosphatase type II beta isoform product : inositol polyphosphate-4-phosphatase, type II protein_id : NP_001019788.1

name	Il15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680407 GeneID:16168 MGI:103014
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IMP]; GO:0005126 - hematopoietin/interferon-class (D200-domain) cytokine receptor binding [Evidence IEA] GO_process : GO:0045062 - extrathymic T cell selection [Evidence IMP]; GO:0006955 - immune response [Evidence IEA]; GO:0048535 - lymph node development [Evidence IMP]; GO:0001866 - NK T cell proliferation [Evidence IMP]; GO:0050778 - positive regulation of immune response [Evidence IMP]; GO:0042102 - positive regulation of T cell proliferation [Evidence IMP]; GO:0050691 - regulation of antiviral response by host [Evidence IMP]; GO:0045580 - regulation of T cell differentiation [Evidence IMP] codon_start : 1 product : interleukin 15 protein_id : NP_032383.1

name	EG666289 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383684 GeneID:666289 MGI:3647995
definition	codon_start : 1 product : hypothetical protein protein_id : XP_998501.1

name	Zfp330 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704208 CCDS:CCDS22447.1 GeneID:30932 MGI:1353574
definition	GO_component : GO:0000775 - chromosome, pericentric region [Evidence ISS]; GO:0030496 - midbody [Evidence ISS]; GO:0005730 - nucleolus [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : nucleolar autoantigen; NOA 36 product : nucleolar autoantigen 36 protein_id : NP_663575.1

name	Rnf150 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90991708 GeneID:330812 MGI:2443860
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : ring finger protein 150 protein_id : NP_796352.2

name	Tbc1d9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794404 CCDS:CCDS22448.1 GeneID:71310 MGI:1918560
definition	codon_start : 1 product : TBC1 domain family, member 9 protein_id : NP_082034.1

name	Ucp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678497 CCDS:CCDS22449.1 GeneID:22227 MGI:98894
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005740 - mitochondrial envelope [Evidence IDA]; GO:0005743 - mitochondrial inner membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0017077 - oxidative phosphorylation uncoupler activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006839 - mitochondrial transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : uncoupling protein, mitochondrial; uncoupling protein 1, mitochondrial product : uncoupling protein 1 (mitochondrial, proton carrier) protein_id : NP_033489.1

name	Elmod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542057 CCDS:CCDS22450.1 GeneID:244548 MGI:2445165
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006909 - phagocytosis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ELMO domain containing 2 protein_id : NP_848851.2

name	4933434I20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119964704 CCDS:CCDS22451.1 GeneID:67555 MGI:1914805
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC67555 protein_id : NP_080509.2

name	Clgn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86262138 CCDS:CCDS22452.1 GeneID:12745 MGI:107472
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007126 - meiosis [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 product : calmegin protein_id : NP_034034.2

name	Scoc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85362711 CCDS:CCDS22453.1 GeneID:56367 MGI:1927654
definition	codon_start : 1 note : isoform a is encoded by transcript variant 1; short coiled coil protein SCOCO product : short coiled-coil protein isoform a protein_id : NP_001034226.1

name	Scoc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790207 GeneID:56367 MGI:1927654
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2; short coiled coil protein SCOCO product : short coiled-coil protein isoform b protein_id : NP_062682.1

name	Olfr370 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129745 CCDS:CCDS22454.1 GeneID:258267 MGI:3030204
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : GA_x6K02T2NUPS-11609807-11610751; olfactory receptor MOR267-16 product : olfactory receptor 370 protein_id : NP_666382.1

name	Ndufb7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385322 CCDS:CCDS22455.1 GeneID:66916 MGI:1914166
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence IDA] GO_function : GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0003954 - NADH dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7 protein_id : NP_080119.1

name	Gpsn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19923070 GeneID:106529 MGI:1915408
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : glycoprotein, synaptic 2 protein_id : NP_598879.1

name	Dnajb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055242 CCDS:CCDS22456.1 GeneID:81489 MGI:1931874
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0051085 - chaperone cofactor-dependent protein folding [Evidence IGI]; GO:0006457 - protein folding [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 product : DnaJ (Hsp40) homolog, subfamily B, member 1 protein_id : NP_061278.1

name	Gipc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055336 CCDS:CCDS22457.1 GeneID:67903 MGI:1926252
definition	codon_start : 1 note : synectin; Tax interacting protein, clone 2; semaF cytoplasmic domain associated protein; RGS-GAIP interacting protein GIPC; neurophilin1-IP product : regulator of G-protein signaling 19 interacting protein 1 protein_id : NP_061241.1

name	Ptger1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7363447 CCDS:CCDS22458.1 GeneID:19216 MGI:97793
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004957 - prostaglandin E receptor activity [Evidence IEA]; GO:0004955 - prostaglandin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : prostaglandin E receptor 1 (subtype EP1) protein_id : NP_038669.1

name	Pkn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32813439 CCDS:CCDS22459.1 GeneID:320795 MGI:108022
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IMP]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006972 - hyperosmotic response [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : serine/threonine kinase 3; protein kinase C-like 1 product : protein kinase N1 protein_id : NP_796236.2

name	LOC671182 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671182
definition	number : 1 pseudo : _no_value

name	LOC671182 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671182
definition	number : 2 pseudo : _no_value

name	LOC671182 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671182
definition	number : 3 pseudo : _no_value

name	LOC671182 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671182
definition	number : 4 pseudo : _no_value

name	LOC671182 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671182
definition	number : 5 pseudo : _no_value

name	LOC671182 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:671182
definition	number : 6 pseudo : _no_value

name	EG666564 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666564
definition	number : 1 pseudo : _no_value

name	LOC675800 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675800
definition	number : 1 pseudo : _no_value

name	LOC675800 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675800
definition	number : 2 pseudo : _no_value

name	LOC675800 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675800
definition	number : 3 pseudo : _no_value

name	LOC675800 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675800
definition	number : 4 pseudo : _no_value

name	LOC675800 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675800
definition	number : 5 pseudo : _no_value

name	LOC100039688 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039688
definition	number : 4 pseudo : _no_value

name	LOC100039688 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039688
definition	number : 3 pseudo : _no_value

name	LOC100039688 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039688
definition	number : 2 pseudo : _no_value

name	LOC100039688 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039688
definition	number : 1 pseudo : _no_value

name	LOC675854 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675854
definition	number : 2 pseudo : _no_value

name	LOC675854 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675854
definition	number : 1 pseudo : _no_value

name	LOC546077 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258963 GeneID:546077
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 177 ESTs, 6 Proteins product : similar to PES1 protein pseudo : _no_value transcript_id : XR_031582.1

clone name	MSMg01-429B08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-123F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071D23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-276D12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-075C17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-479C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492P13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-524K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111J19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-460O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303O04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-332C07.b	B6Ng01-332C07.g
ACC	GA118329	GA118330
length	1,293	1,199
definition	B6Ng01-332C07.b	B6Ng01-332C07.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccacacatattttatcactgggtagttaccaagaatgccaagaat atcacgaagaaatatttcttcatcagaaatactgagaaaactgatattgt acaaagaacctaattagacccctttctgtttcatcacaaaaaattaattc agatggatcaaaattttaacctgaaagcaggaacctactggaggacatgt ccctgtggtatagcagatcatcttttgggcatgtgcccaggagcagtata gatgggtcttcaagtagaactatttccaattttctgaggaactgccagat tggtttgtagagtggttgtatcattttacactccctcctgcaagagagga gtgctttctacatctttgctaacatctgctatcacttgaattttttatct tagacacaaggacacttgttctactatgttcatagcagccttgttcataa taccagaagctggaaacaatacagatgtcctcaaacagaaaaatggatat agaaaatcatgttaatttacacaatggaatactattcagctatttaaaat gagaacatcatgaattttgcaggcaaatggaaggaactagaaaacatcat ccagagtgaggtaacccaaaaggacatgcatggtatgtattcactgataa atggatattagccaaaaagtatagaatacccatgaaaaaactgcagactg taagaagtttaacaagaaggaaggcccaaatgagtacacttcaatgccac ttagaaggaggaagaatataatcataggaggagaagggagggagaaactg agtgagaaaggagaaggggaagagaaaaggaggcaggatcaggtatgggg gaagacaggagagaaaaccaaagggccaggacaatgtatggaagtatgca gctgtggagagtcccagagacctgggatgtgagaggctcccaggactcaa tggggatgaccttagccaaatgcccaacaatgagggaatggaatctgaga gaccacatccagtagatagacagggctcctaatagaagaaatgtttcacc aacctaaccttcaatttttgacccaaaattgttccttgtcctaaagaaaa tacgggaacaaaaatagtgcagagactggaaagaaagaactattccagta ctgaccaccttgagtgcatccatgcccaaggcaccaccctaacctttact ggatgcactgttggccatcgacgtcctaatatggacatctgagctttcac gctacgtgtaactggagacagatatatcttacggactgcaact	gaattcaactccaaccccagtactccggtagcagaggcaggagggtcaga agttcaaggtcattcttggctatatgctatgtccagggacaacctgggac acatgagagcctgtctcaaaaaacaaaacaaacaaaaacaaaactaaacc aaactacaaaaataccccccacaaagtcacttatcaaatagccaggtgta cttttattagaaaaaagtcacagagtgctttcaatctggtgatttccttt tatttgctactctccttcattgctccccatgttccaaggctacctctgta gagtgtgactatgatatcgtaggtatttgtaagcatggtttcacataaaa gaaacactcatcttctctgggagagggatcttagaacacatattatctca aaactagtttctaatttccttttcactgatccataatactcttgcttcca agagttcaaactggtatatcttagatattgtattcaagctgtaatatcag tctcaacgaattaactattatactaataagagataattagattttcaatt tccactattacggaaactggaagtcaatgctatggtacttacaagtttgt acagacttaactgtttctgtagggagtacgctggaggtaaaatttcgagg tcaaatctaatgagcacttaaaattttagtaggtacaataggtcaaactg tcctctgaaaaggggaggaagtaggtacttaagacaacaaccactggagt ccctgccagtgctggacagaagggagacctcacagactttccaggcaaag ctttgagcagcagttctcccttacttggctattcttacatcattagagca ttatttgtttcgttactgaaactcttgctgttctaatgaagacctggtaa gtcccatgtacttactgtacctgtcttaggattgagtaggctatggtagg aggtgctaagtgtcttatagatttgtaggaaatatagagacatgctcttc agaccagtgttgagccagaaaatatttctcttgttcttttgcaggccagc tgctcttgatcagcctggcattacacctaagaccctgctcagtctcccga ctgctggaaattgccagggtgtgtttcaaatgctgtttcactcttccacg agccttgaccatattcattttaaactcttatgctgaactttccctatat
quality values	Open. Hide. 58 41 27 28 62 62 41 20 54 41 54 39 62 62 54 62 62 47 56 44 32 39 62 62 62 62 62 45 43 43 45 28 28 29 22 26 36 34 37 62 59 59 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 54 59 62 59 59 34 42 54 54 62 62 62 62 62 62 62 54 62 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 54 58 58 58 43 58 58 58 58 58 58 54 58 58 52 58 58 54 54 58 58 58 58 54 58 58 58 52 58 58 54 58 58 58 58 58 54 58 58 54 58 58 58 54 58 58 58 58 58 58 54 58 52 58 54 47 58 58 52 58 58 54 54 58 47 40 50 51 58 58 50 58 58 58 52 41 54 58 51 52 51 58 58 50 51 58 58 58 51 49 49 47 49 58 58 42 36 53 41 58 49 46 51 42 37 58 58 58 51 53 53 52 47 58 50 58 50 41 46 51 58 50 52 51 58 58 58 58 49 49 33 50 51 58 52 53 31 47 29 50 58 31 50 53 42 58 58 41 52 58 31 50 40 50 39 52 50 58 42 25 41 23 42 30 35 13 58 51 37 41 42 41 52 53 32 53 32 42 41 36 58 53 39 31 39 49 49 32 37 21 44 49 53 42 33 54 42 18 53 53 20 53 46 35 34 49 24 35 31 42 32 46 52 42 25 53 37 27 44 47 18 51 46 24 49 44 31 54 54 41 29 54 54 46 32 38 54 28 40 42 41 32 13 47 44 52 32 47 54 52 31 45 40 32 53 51 16 54 49 33 38 37 31 53 25 52 53 53 47 24 32 33 11 52 24 31 26 33 25 29 32 29 31 41 28 33 39 45 52 52 49 32 28 31 26 27 13 33 31 45 31 16 33 9 38 51 51 32 23 43 30 40 31 36 51 31 25 43 29 31 31 24 13 31 21 31 31 19 18 36 42 42 29 34 21 31 20 32 31 32 29 18 26 37 32 30 31 30 43 19 31 21 31 37 46 27 14 10 42 9 15 13 32 31 29 24 21 18 12 31 16 22 28 21 31 20 19 6 30 22 37 31 21 19 19 31 23 31 30 19 23 31 41 46 48 31 21 21 27 31 17 31 18 36 27 21 32 38 22 41 18 27 19 16 44 33 22 26 28 16 23 31 38 32 22 43 21 22 24 13 29 26 25 9 11 26 24 21 24 5 18 9 11 18 33 12 38 22 34 21 26 12 19 13 15 10 31 16 11 16 23 22 12 23 43 21 27 22 21 33 12 22 24 15 17 11 25 7 7 19 14 7 4 9 4 43 24 22 14 19 23 8 13 18 22 11 7 12 26 19 22 21 19 18 16 3 26 40 34 21 16 15 9 27 28 11 33 34 15 18 16 10 7 23 16 28 12 6 8 6 11 9 10 20 29 27 9 13 28 29 12 19 13 7 13 29 7 22 5 8 5 15 29 32 10 16 11 7 6 11 14 9 4 15 9 17 24 15 8 6 22 28 5 9 4 22 22 5 6 4 6 6 6 7 16 19 21 10 15 17 22 12 13 3 3 3 9 11 8 7 9 6 6 6 4 13 10 13 10 7 11 7 10 5 8 4 8 5 6 5 10 24 5 5 21 13 21 5 28 20 8 4 5 6 2 5 13 3 8 13 9 6 4 5 5 6 22 4 4 4 6 5 19 6 14 5 2 1 3 2 3 6 4 4 1 1 2 3 9 7 5 4 3 2 1 7 7 8 5 8 6 12 7 2 1 3 4 5 6 5 6 6 6 4 10 11 5 11 6 4 8 6 4 6 6 7 9 4 6 5 5 5 13 5 4 4 5 5 6 24 8 16 8 8 16 7 6 4 4 11 4 2 1 3	Open. Hide. 62 59 43 59 62 59 39 41 51 51 34 27 23 28 28 28 28 54 44 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 56 62 59 59 56 35 54 62 59 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 54 54 54 62 62 62 62 62 42 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 54 49 42 54 62 62 54 54 49 54 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 54 58 54 58 58 58 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 58 58 54 46 58 41 58 58 58 58 54 52 58 54 58 58 54 58 51 46 58 58 58 58 49 58 58 58 58 58 50 51 49 49 58 51 50 58 43 42 47 46 54 58 58 37 35 58 53 52 58 49 48 52 58 58 58 41 58 49 58 50 51 46 58 50 51 51 49 39 51 51 58 58 52 58 51 50 51 53 40 58 58 51 53 58 58 51 53 53 50 52 29 58 43 36 50 37 52 52 51 31 51 50 42 33 58 46 41 51 58 52 58 49 49 54 50 50 53 58 58 50 31 58 58 32 53 30 50 40 52 30 45 52 27 54 35 38 39 47 39 28 50 32 37 39 35 35 47 24 39 51 51 39 53 53 54 51 39 20 38 25 50 47 39 52 40 49 30 29 32 46 35 33 31 54 35 30 40 45 54 41 21 54 40 51 19 29 19 32 40 39 21 24 24 37 31 23 53 54 39 37 41 31 29 54 17 24 52 52 31 31 35 49 47 31 53 31 40 40 35 40 43 36 53 53 45 40 30 53 41 38 32 31 31 32 36 34 52 31 29 24 25 32 43 31 30 30 31 23 42 36 31 29 31 42 24 43 31 36 17 11 43 28 15 47 46 27 17 51 40 33 30 42 30 19 31 29 32 31 51 30 31 31 36 38 31 32 32 31 43 31 34 31 25 21 31 31 41 31 31 14 33 31 25 31 30 32 29 35 32 28 26 25 46 36 23 31 37 24 26 30 25 35 25 32 31 39 25 26 23 29 30 41 32 23 25 21 22 30 20 34 23 31 32 30 20 30 27 15 24 26 31 25 25 31 34 23 31 22 11 32 24 26 17 31 31 33 23 33 18 25 31 24 32 24 29 16 13 16 14 7 7 47 26 18 18 21 25 13 31 44 28 18 20 23 32 12 29 5 22 15 6 21 32 24 32 32 16 33 10 11 16 32 11 20 17 10 12 15 6 11 20 30 23 29 29 27 17 33 26 15 13 6 10 25 48 20 33 9 7 6 9 23 11 7 7 14 48 48 28 14 25 16 14 18 11 14 12 23 5 12 22 20 27 27 13 27 9 11 5 26 10 16 11 12 10 15 15 18 24 19 26 15 10 5 6 21 11 15 27 11 33 10 28 7 18 10 12 3 7 14 10 19 23 20 19 22 18 14 16 12 6 8 10 6 7 16 6 26 5 16 14 16 10 10 13 22 15 4 6 7 3 4 4 4 4 7 6 8 22 12 6 9 1 6 4 7 22 10 9 6 5 5 4 3 3 2 5 6 3 14 6 7 9 4 4 5 1 1 2 7 10 9 10 10 10 4 3 17 27 14 4 12 4 5 7 7 4 7 3 6 6 10 5 6 12 13 5 11 29 13 3 14 22 6 1 4 6 8

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_85210627_85211823
seq2: B6Ng01-332C07.g_68_1266 (reverse)

seq1  ATATAGGGAAAAGTCAGCA-AAGAG--TAAAATG-ATATGACCCAGGCTT  46
      |||||||||||  |||||| |||||  ||||||| |||||  | |||| |
seq2  ATATAGGGAAAGTTCAGCATAAGAGTTTAAAATGAATATGGTCAAGGC-T  49

seq1  CGTGGGAAGAGTGAACAGGCATCTGACACACACC--TGCAA-TTCCAGCA  93
      ||| |||||||||||   |||| ||| |||||||   |||| ||||||||
seq2  CGT-GGAAGAGTGAAACAGCATTTGAAACACACCCTGGCAATTTCCAGCA  98

seq1  GTCGGGAGACTGAGGCAAGGTCTTAGGTGTAATGCCAGCTGGATTCAAGA  143
      ||||||||||||| ||| ||||||||||||||||||||   || ||||||
seq2  GTCGGGAGACTGA-GCAGGGTCTTAGGTGTAATGCCAGGCTGA-TCAAGA  146

seq1  GCAGCCTGGCCTGCAAAAG-ACAGAGGAAATATTTTTCTGGCTC-ACACT  191
      |||| |||||||||||||| |||   |||||| ||||||||||| |||||
seq2  GCAG-CTGGCCTGCAAAAGAACAAGAGAAATA-TTTTCTGGCTCAACACT  194

seq1  GGTCTGAAGAGCATGTCTTCTATATTTCCTACAAATCTATAAGACACTTA  241
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGTCTGAAGAGCATGTC-TCTATATTTCCTACAAATCTATAAGACACTTA  243

seq1  GCACCTCCTACCATAGCCTACTCAATCCTAAGACAGGTACAGTAAGTACA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCCTACCATAGCCTACTCAATCCTAAGACAGGTACAGTAAGTACA  293

seq1  TGGGACTTACCAGGTCTTCATTAGAACAGCAAGAGTTTCAGTAACGAAAC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTTACCAGGTCTTCATTAGAACAGCAAGAGTTTCAGTAACGAAAC  343

seq1  AAATAATGCTCTAATGATGTAAGAATAGCCAAGTAAGGGAGAACTGCTGC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGCTCTAATGATGTAAGAATAGCCAAGTAAGGGAGAACTGCTGC  393

seq1  TCAAAGCTTTGCCTGGAAAGTCTGTGAGGTCTCCCTTCTGTCCAGCACTG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTTTGCCTGGAAAGTCTGTGAGGTCTCCCTTCTGTCCAGCACTG  443

seq1  GCAGGGACTCCAGTGGTTGTTGTCTTAAGTACCTACTTCCTCCCCTTTTC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGACTCCAGTGGTTGTTGTCTTAAGTACCTACTTCCTCCCCTTTTC  493

seq1  AGAGGACAGTTTGACCTATTGTACCTACTAAAATTTTAAGTGCTCATTAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACAGTTTGACCTATTGTACCTACTAAAATTTTAAGTGCTCATTAG  543

seq1  ATTTGACCTCGAAATTTTACCTCCAGCGTACTCCCTACAGAAACAGTTAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACCTCGAAATTTTACCTCCAGCGTACTCCCTACAGAAACAGTTAA  593

seq1  GTCTGTACAAACTTGTAAGTACCATAGCATTGACTTCCAGTTTCCGTAAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTACAAACTTGTAAGTACCATAGCATTGACTTCCAGTTTCCGTAAT  643

seq1  AGTGGAAATTGAAAATCTAATTATCTCTTATTAGTATAATAGTTAATTCG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAATTGAAAATCTAATTATCTCTTATTAGTATAATAGTTAATTCG  693

seq1  TTGAGACTGATATTACAGCTTGAATACAATATCTAAGATATACCAGTTTG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACTGATATTACAGCTTGAATACAATATCTAAGATATACCAGTTTG  743

seq1  AACTCTTGGAAGCAAGAGTATTATGGATCAGTGAAAAGGAAATTAGAAAC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGGAAGCAAGAGTATTATGGATCAGTGAAAAGGAAATTAGAAAC  793

seq1  TAGTTTTGAGATAATATGTGTTCTAAGATCCCTCTCCCAGAGAAGATGAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTGAGATAATATGTGTTCTAAGATCCCTCTCCCAGAGAAGATGAG  843

seq1  TGTTTCTTTTATGTGAAACCATGCTTACAAATACCTACGATATCATAGTC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTTTATGTGAAACCATGCTTACAAATACCTACGATATCATAGTC  893

seq1  ACACTCTACAGAGGTAGCCTTGGAACATGGGGAGCAATGAAGGAGAGTAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTACAGAGGTAGCCTTGGAACATGGGGAGCAATGAAGGAGAGTAG  943

seq1  CAAATAAAAGGAAATCACCAGATTGAAAGCACTCTGTGACTTTTTTCTAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAAAGGAAATCACCAGATTGAAAGCACTCTGTGACTTTTTTCTAA  993

seq1  TAAAAGTACACCTGGCTATTTGATAAGTGACTTTGTGGGGGGTATTTTTG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTACACCTGGCTATTTGATAAGTGACTTTGTGGGGGGTATTTTTG  1043

seq1  TAGTTTGGTTTAGTTTTGTTTTTGTTTGTTTTGTTTTTTGAGACAGGCTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGGTTTAGTTTTGTTTTTGTTTGTTTTGTTTTTTGAGACAGGCTC  1093

seq1  TCATGTGTCCCAGGTTGTCCCTGGACATAGCATATAGCCAAGAATGACCT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTCCCAGGTTGTCCCTGGACATAGCATATAGCCAAGAATGACCT  1143

seq1  TGAACTTCTGACCCTCCTGCCTCTGCTACCGGAGTACTGGGGTTGGAGTT  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTCTGACCCTCCTGCCTCTGCTACCGGAGTACTGGGGTTGGAGTT  1193

seq1  GAATTC  1197
      ||||||
seq2  GAATTC  1199

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information