BAC Information

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BAC

Clone NameB6Ng01-333P22
Chromosome8 (Build37)
Map Location 116,053,052 - 116,219,855
singlet/doubletdoublet
Overlap geneMon1b, 4930481F22Rik
Upstream geneCntnap4, LOC100042061
Downstream geneAdamts18, Nudt7, AI427515, Clec3a, Wwox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-333P22.bB6Ng01-333P22.g
ACCGA119611GA119612
length501589
definitionB6Ng01-333P22.b B6Ng01-333P22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,053,052 - 116,053,558)(116,219,267 - 116,219,855)
sequence
ttcctatagagactgcaggaaacagggaactgaggagagtccagaacaca
atccctgtcaactgtgatactgtactgtcaaggctgctgtaggtggcaaa
tgggtgacatcagtcaaaactcagttgggcagggtctaaatgcagagtcc
tactgtcaaagtctgcatcactgaatcagtcccatggacacacgaatgtg
acctctctgtgtaatcttccttccacctgcacacaaacatgtgctgtgtg
tgcagacttgaaaacataatcaagctgggcagtggtggcgcacgccttta
atcccagcacttgtgaggcagaggtaggcagatttctgagttcgaggcca
gcctgggctacagagtgagttccaggaaagccagggctacacagagaaac
cctgtctcgaaaataaaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaaggaagagagggagggag
g

gaattctgcgcagagctgggaatttaagatggggaatcggggtggaaggt
aataaattcctgctaagcccctcttttcaacagaggatacttgaagactt
gttgcatagtttaataactctattccttaataatagcttctctctgggat
gatagtatttcctgagcaatagcaccagagtgtctggagcttgcaggttc
ccaggatcatcaggatggagagaaggcttgctgggctgctcttggcatgg
gctccattctaatcatttctacgacagtgagtgtcataccaagagtggat
tatagcgttcagatcattgagcctcctgttgtaaatttcaaagggaaatg
atcacttgtttatgggttttgttggccttatcttgaaaactgtagaaaca
gggggcttggacaggttgcacagtggtgaagaacgcagatgttcttgcat
aggctgcaagtttcagttttaaactcatgttgggcagctcaaaaccaccc
cattgcaaactccatgtgatctgacattctggtttttgcagcctgtactt
gagtgtgtatacagagagagagagagagagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_116053052_116053558
seq2: B6Ng01-333P22.b_49_555

seq1  GAATTCTTCCTATAGAGACTGCAGGAAACAGGGAACTGAGGAGAGTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTATAGAGACTGCAGGAAACAGGGAACTGAGGAGAGTCCAG  50

seq1  AACACAATCCCTGTCAACTGTGATACTGTACTGTCAAGGCTGCTGTAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAATCCCTGTCAACTGTGATACTGTACTGTCAAGGCTGCTGTAGGT  100

seq1  GGCAAATGGGTGACATCAGTCAAAACTCAGTTGGGCAGGGTCTAAATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATGGGTGACATCAGTCAAAACTCAGTTGGGCAGGGTCTAAATGCA  150

seq1  GAGTCCTACTGTCAAAGTCTGCATCACTGAATCAGTCCCATGGACACACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTACTGTCAAAGTCTGCATCACTGAATCAGTCCCATGGACACACG  200

seq1  AATGTGACCTCTCTGTGTAATCTTCCTTCCACCTGCACACAAACATGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGACCTCTCTGTGTAATCTTCCTTCCACCTGCACACAAACATGTGC  250

seq1  TGTGTGTGCAGACTTGAAAACATAATCAAGCTGGGCAGTGGTGGCGCACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCAGACTTGAAAACATAATCAAGCTGGGCAGTGGTGGCGCACG  300

seq1  CCTTTAATCCCAGCACTTGTGAGGCAGAGGTAGGCAGATTTCTGAGTTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAATCCCAGCACTTGTGAGGCAGAGGTAGGCAGATTTCTGAGTTCG  350

seq1  AGGCCAGCCTGGGCTACAGAGTGAGTTCCAGGAAAGCCAGGGCTACACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCTGGGCTACAGAGTGAGTTCCAGGAAAGCCAGGGCTACACAG  400

seq1  AGAAACCCTGTCTCGAAAATAAAAAGAAAGAAAGAAAGAAAGAAAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCTGTCTCGAAAATAAAAAGAAAGAAAGAAAGAAAGAAAGAAAG  450

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAGAGGG  500

seq1  AGGGAGG  507
      |||||||
seq2  AGGGAGG  507


seq1: chr8_116219267_116219855
seq2: B6Ng01-333P22.g_70_658 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTGTATACACACTCAAGTACAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTGTATACACACTCAAGTACAGGCT  50

seq1  GCAAAAACCAGAATGTCAGATCACATGGAGTTTGCAATGGGGTGGTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAACCAGAATGTCAGATCACATGGAGTTTGCAATGGGGTGGTTTTG  100

seq1  AGCTGCCCAACATGAGTTTAAAACTGAAACTTGCAGCCTATGCAAGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCCAACATGAGTTTAAAACTGAAACTTGCAGCCTATGCAAGAACA  150

seq1  TCTGCGTTCTTCACCACTGTGCAACCTGTCCAAGCCCCCTGTTTCTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCGTTCTTCACCACTGTGCAACCTGTCCAAGCCCCCTGTTTCTACAG  200

seq1  TTTTCAAGATAAGGCCAACAAAACCCATAAACAAGTGATCATTTCCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGATAAGGCCAACAAAACCCATAAACAAGTGATCATTTCCCTTT  250

seq1  GAAATTTACAACAGGAGGCTCAATGATCTGAACGCTATAATCCACTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTACAACAGGAGGCTCAATGATCTGAACGCTATAATCCACTCTTG  300

seq1  GTATGACACTCACTGTCGTAGAAATGATTAGAATGGAGCCCATGCCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACACTCACTGTCGTAGAAATGATTAGAATGGAGCCCATGCCAAGA  350

seq1  GCAGCCCAGCAAGCCTTCTCTCCATCCTGATGATCCTGGGAACCTGCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCAGCAAGCCTTCTCTCCATCCTGATGATCCTGGGAACCTGCAAG  400

seq1  CTCCAGACACTCTGGTGCTATTGCTCAGGAAATACTATCATCCCAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGACACTCTGGTGCTATTGCTCAGGAAATACTATCATCCCAGAGAG  450

seq1  AAGCTATTATTAAGGAATAGAGTTATTAAACTATGCAACAAGTCTTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATTATTAAGGAATAGAGTTATTAAACTATGCAACAAGTCTTCAAG  500

seq1  TATCCTCTGTTGAAAAGAGGGGCTTAGCAGGAATTTATTACCTTCCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCTGTTGAAAAGAGGGGCTTAGCAGGAATTTATTACCTTCCACCC  550

seq1  CGATTCCCCATCTTAAATTCCCAGCTCTGCGCAGAATTC  589
      |||||||||||||||||||||||||||||||||||||||
seq2  CGATTCCCCATCTTAAATTCCCAGCTCTGCGCAGAATTC  589


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