MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-335I09
Chromosome	8 (Build37)
Map Location	98,511,819 - 98,616,228
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Gpr56, Gpr97, Gm770, Katnb1, Kifc3, BC016201, Map1lc3-ps6, 1700055M20Rik, Zfp319, AA960436, Mmp15, Gtl3, Csnk2a2, 4933406B17Rik, Ccdc113, 4931432M23Rik, EG546088, LOC100041040, Gins3, LOC547022, Ndrg4, Setd6, Cnot1, LOC100041953, LOC100041088, BC031853, LOC100041972, Got2, LOC667445
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gpr56 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14766 MGI:1340051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr97 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54672 MGI:1859670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm770 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330830 MGI:2685616
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Katnb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74187 MGI:1921437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kifc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16582 MGI:109202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC016201 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234586 MGI:2385303
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 5 Proteins

name	Map1lc3-ps6 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384883
definition	note : microtubule-associated protein 1 light chain 3 pseudogene copy 6 pseudo : _no_value

name	1700055M20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73407 MGI:1920657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Zfp319 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:79233 MGI:1890618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AA960436 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101985 MGI:2142454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mmp15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17388 MGI:109320
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gtl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14894 MGI:107428
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Csnk2a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13000 MGI:88547
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933406B17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71040 MGI:1918290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Ccdc113 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244608 MGI:3606076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4931432M23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70993 MGI:1918243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG546088 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546088 MGI:3645264
definition	note : predicted gene, EG546088 pseudo : _no_value

name	LOC100041040 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041040
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Gins3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78833 MGI:1926083
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC547022 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547022
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ndrg4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234593 MGI:2384590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Setd6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66083 MGI:1913333
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnot1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234594 MGI:2442402
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 321 ESTs, 4 Proteins

name	LOC100041953 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 357 ESTs, 4 Proteins

name	LOC100041088 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	BC031853 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234595 MGI:2679005
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041972 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs

name	Got2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14719 MGI:95792
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667445 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667445
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Gpr56 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982717 GeneID:14766 MGI:1340051
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 56 transcript_id : NM_018882.2

name	Gpr97 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40789244 GeneID:54672 MGI:1859670
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 97 transcript_id : NM_173036.2

name	Gm770 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372892 GeneID:330830 MGI:2685616
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 770, (NCBI) transcript_id : NM_001042715.2

name	Katnb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84095200 GeneID:74187 MGI:1921437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : katanin p80 (WD40-containing) subunit B 1 transcript_id : NM_028805.2

name	Kifc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84042514 GeneID:16582 MGI:109202
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member C3 transcript_id : NM_010631.2

name	BC016201 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704201 GeneID:234586 MGI:2385303
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 5 Proteins product : cDNA sequence BC016201 transcript_id : NM_145601.1

name	1700055M20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40804745 GeneID:73407 MGI:1920657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700055M20 gene transcript_id : NM_199455.1

name	1700055M20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365819 GeneID:73407 MGI:1920657
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700055M20 gene transcript_id : NM_028532.2

name	Zfp319 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254352 GeneID:79233 MGI:1890618
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 319 transcript_id : NM_024467.3

name	AA960436 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527175 GeneID:101985 MGI:2142454
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AA960436 transcript_id : NM_133954.1

name	Mmp15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55926148 GeneID:17388 MGI:109320
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 15 transcript_id : NM_008609.3

name	Gtl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680126 GeneID:14894 MGI:107428
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene trap locus 3 transcript_id : NM_008187.1

name	Csnk2a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982441 GeneID:13000 MGI:88547
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : casein kinase 2, alpha prime polypeptide transcript_id : NM_009974.2

name	4933406B17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259034 GeneID:71040 MGI:1918290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933406B17 gene transcript_id : XM_001477935.1

name	Ccdc113 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801871 GeneID:244608 MGI:3606076
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 113 transcript_id : NM_172914.2

name	4931432M23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625795 GeneID:70993 MGI:1918243
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4931432M23 gene transcript_id : NM_027640.1

name	Gins3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802560 GeneID:78833 MGI:1926083
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GINS complex subunit 3 (Psf3 homolog) transcript_id : NM_030198.2

name	Ndrg4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130183 GeneID:234593 MGI:2384590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-myc downstream regulated gene 4 transcript_id : NM_145602.2

name	Setd6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368643 GeneID:66083 MGI:1913333
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing 6 transcript_id : NM_001035123.2

name	Cnot1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383742 GeneID:234594 MGI:2442402
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 321 ESTs, 4 Proteins product : CCR4-NOT transcription complex, subunit 1, transcript variant 2 transcript_id : XM_894673.2

name	LOC100041953 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259038 GeneID:100041953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 357 ESTs, 4 Proteins product : similar to SAP18 transcript_id : XM_001478046.1

name	LOC100041088 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258987 GeneID:100041088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041088 transcript_id : XM_001475776.1

name	BC031853 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142346461 GeneID:234595 MGI:2679005
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC031853 transcript_id : NM_172758.2

name	LOC100041972 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259040 GeneID:100041972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs product : hypothetical protein LOC100041972 transcript_id : XM_001478075.1

name	Got2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892509 GeneID:14719 MGI:95792
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate oxaloacetate transaminase 2, mitochondrial transcript_id : NM_010325.2

name	Gpr56 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982718 CCDS:CCDS22553.1 GeneID:14766 MGI:1340051
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : serpentine receptor; secretin receptor product : G protein-coupled receptor 56 protein_id : NP_061370.2

name	Gpr97 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789245 CCDS:CCDS22554.1 GeneID:54672 MGI:1859670
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : pre B-cell transcription factor 1; G 97 product : G protein-coupled receptor 97 protein_id : NP_766624.2

name	Gm770 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111607473 GeneID:330830 MGI:2685616
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC330830 protein_id : NP_001036180.1

name	Katnb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84095201 CCDS:CCDS22555.1 GeneID:74187 MGI:1921437
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005813 - centrosome [Evidence IDA]; GO:0008352 - katanin [Evidence ISS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0045502 - dynein binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 product : katanin p80 (WD40-containing) subunit B 1 protein_id : NP_083081.2

name	Kifc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84042515 GeneID:16582 MGI:109202
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005871 - kinesin complex [Evidence IDA]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0008569 - minus-end-directed microtubule motor activity [Evidence TAS]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007030 - Golgi organization and biogenesis [Evidence IMP]; GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IDA] codon_start : 1 product : kinesin family member C3 protein_id : NP_034761.2

name	BC016201 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704202 GeneID:234586 MGI:2385303
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC234586 protein_id : NP_663576.1

name	1700055M20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40804746 CCDS:CCDS22557.1 GeneID:73407 MGI:1920657
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1; testis/prostate/placenta-expressed protein, isoform 2 product : testis/prostate/placenta-expressed protein isoform 1 protein_id : NP_955534.1

name	1700055M20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40804765 CCDS:CCDS22558.1 GeneID:73407 MGI:1920657
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2; testis/prostate/placenta-expressed protein, isoform 2 product : testis/prostate/placenta-expressed protein isoform 2 protein_id : NP_082808.1

name	Zfp319 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254353 CCDS:CCDS22559.1 GeneID:79233 MGI:1890618
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 319 protein_id : NP_077787.3

name	AA960436 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527176 CCDS:CCDS22560.1 GeneID:101985 MGI:2142454
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC101985 protein_id : NP_598715.1

name	Mmp15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678900 CCDS:CCDS22561.1 GeneID:17388 MGI:109320
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA] [Evidence ISS]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : Membrane type 2-MMP product : matrix metalloproteinase 15 protein_id : NP_032635.1

name	Gtl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680127 GeneID:14894 MGI:107428
definition	codon_start : 1 exception : mismatches in translation product : gene trap locus 3 protein_id : NP_032213.1

name	Csnk2a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753540 CCDS:CCDS22562.1 GeneID:13000 MGI:88547
definition	GO_component : GO:0005956 - protein kinase CK2 complex [Evidence TAS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004682 - protein kinase CK2 activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IDA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : casein kinase II, alpha 2, polypeptide protein_id : NP_034104.1

name	4933406B17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259035 GeneID:71040 MGI:1918290
definition	codon_start : 1 product : hypothetical protein LOC71040 protein_id : XP_001477985.1

name	Ccdc113 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370404 CCDS:CCDS22563.1 GeneID:244608 MGI:3606076
definition	codon_start : 1 product : coiled-coil domain containing 113 protein_id : NP_766502.1

name	4931432M23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625796 GeneID:70993 MGI:1918243
definition	GO_function : GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 function : putative non-peptidase serine protease note : plasma kallikrein-like protein 4 product : RIKEN cDNA 4931432M23 protein_id : NP_081916.1

name	Gins3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313504 CCDS:CCDS22564.1 GeneID:78833 MGI:1926083
definition	codon_start : 1 product : GINS complex subunit 3 (Psf3 homolog) protein_id : NP_084474.1

name	Ndrg4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704212 CCDS:CCDS22565.1 GeneID:234593 MGI:2384590
definition	GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA] codon_start : 1 note : N-myc downstream regulated 1, related sequence; N-myc downstream regulated 4 product : N-myc downstream regulated gene 4 protein_id : NP_663577.1

name	Setd6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78097104 CCDS:CCDS22566.1 GeneID:66083 MGI:1913333
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : SET domain containing 6 protein_id : NP_001030295.1

name	Cnot1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383743 GeneID:234594 MGI:2442402
definition	codon_start : 1 product : CCR4-NOT transcription complex, subunit 1 isoform 2 protein_id : XP_899766.2

name	LOC100041953 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259039 GeneID:100041953
definition	codon_start : 1 product : similar to SAP18 protein_id : XP_001478096.1

name	LOC100041088 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258988 GeneID:100041088
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475826.1

name	LOC100041972 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259041 GeneID:100041972
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478125.1

name	BC031853 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370116 CCDS:CCDS22567.1 GeneID:234595 MGI:2679005
definition	codon_start : 1 product : amino acid transporter protein_id : NP_766346.1

name	Got2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754036 CCDS:CCDS22568.1 GeneID:14719 MGI:95792
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA] [Evidence IDA] GO_function : GO:0004069 - aspartate transaminase activity [Evidence IDA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016769 - transferase activity, transferring nitrogenous groups [Evidence IEA] GO_process : GO:0006520 - amino acid metabolism [Evidence IEA]; GO:0009058 - biosynthesis [Evidence IEA] codon_start : 1 note : mitochondrial aspartate aminotransferase; plasma membrane fatty acid binding protein product : glutamate oxaloacetate transaminase 2, mitochondrial protein_id : NP_034455.1

name	LOC100041040 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041040
definition	number : 1 pseudo : _no_value

name	LOC100041040 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041040
definition	number : 2 pseudo : _no_value

name	LOC547022 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547022
definition	number : 1 pseudo : _no_value

name	LOC667445 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667445
definition	number : 1 pseudo : _no_value

name	LOC667445 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667445
definition	number : 2 pseudo : _no_value

clone name	MSMg01-497G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306N14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-335I09.b	B6Ng01-335I09.g
ACC	GA120723	GA120724
length	1,083	1,039
definition	B6Ng01-335I09.b	B6Ng01-335I09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(98,511,819 - 98,512,919)	(98,615,183 - 98,616,228)
sequence	gaattccaggacagccagggctatacagagaaaccttgtcttaaaaaaaa aaaaccctaaaaacaaaaaccaaccaaacaaccccccccaaacaacaaca acaacaaaaaaacccaaatccaaaccccaaaccagcccccccccccaaaa aaaaaaagtgaatagaaaatattgtaagaccatagggaaagtatcacgtg gctggccatttagggaagtgataccaaccaggagccctttagtttgggtt tttaaagcagcctttgggatttaccctatacacaaggtggataaggaggc catagttgcatcttaagtatatgcctggcactgactagaggaagcgactg gactcttctgtggaggtatcagtgaacagtctaccttaaaggctatttat ttattttagttagcttacagagtagcaagtttcttgacaacatttccata cctcattggctgggttcctccctgttcctcactgcatctcctgccttcct ttcccttctgtatcctttagttcccagaatccctttttccaatttcatat caaatgtgtcttctccaccctaccccagaatgcctatttgcttcctatct cagggcccctttctaatctcctacactttttctaaacttccacttctcct ccttctccttcttctttctattctgcttcatcttaagcatcttctcttcc tcctccttctccttcattgttttcttctcttccttctccttcttgttcct cccccctcctccttttattctttttctttttggcatcatttgttttagac ccggaatatgagcacggctcctggaaagggccagatctgtgtctttgtct agagagcaaccccttgcttatgcattctgttctcattcacaagtcttagc taagctaggtcatcatgatctatttaggaacagaatgcatttagctatga tctatgtctaatatgccctgcttctcaaaaaaaaaaaaacccactagatt tgtgatctaaatgagtatcacagcagatttgtgttgatcctagtctctgc tcaagatctagaatttgtgcagtagataatatt	gaattccataagaggaaaactaatgaatatggtcaattcaatgcttatat gaaaacaacaaaatcacatattgactcacatttcatacaaagggcaatat taacttgaagaacattgcaggcataaatgagaaagatgaaatgataagac ttctagaataaaatggaatatggaggattagtaactctttgaataggcaa aactgtttgaagtagagaagaaaaaacaaaaatcctctaagttcagtaaa ctgaacctcattaaagtaactgctggtgaggctggaggctggctcatcaa aaacatttagaactattagacttttttaaagttttatacacttaatatac atatatatatatatatatatatatatatatatatatatatatatatatat aatatgctctgttttcatgcacaccagaagagggaatcagagtccatagc agatggttgtgagccaccatgtgataactaggaattgaactcagaatttc tggatgagaaaccaatgcttttaactgctgagccatcttccagcctttga acaattagaattttgttttcagctttcctggatgttatggtttggatttc ggatgttctccctggatagcaacaattcaatgtggtacatttgaaaatcc actagactgtgagagctctgacctcacgcatgcatcactccatgcacaga tttgtagcttcagggcctaatggaaggtggtagaaatttggggagcctat ttggagaaagtaagtcactggggaactgctcttgaaggatgtttaccccc agcaaattcttccggatcccttcttctggtttccatgagacaatcagctt tcctcctccatgcagattgcgcaatgaagtctgtcttacatggtcctgaa ataaatagagctagacaaccatgtcagaaacctccgtaactatgactaag atctttctctggtgagtagaaatttatcacagttgatgatagagactgcc caaacacatagtggaaagtgccggtgcttaagagggaag
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr8_98511819_98512919
seq2: B6Ng01-335I09.b_50_1132

seq1  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCTTGTCTTAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCTTGTCTTAAAAAAAA  50

seq1  AAAACCCTAAAAACAAAAACCAACCAAACAACCCCCCCCAAACAACAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCTAAAAACAAAAACCAACCAAACAACCCCCCCCAAACAACAACA  100

seq1  ACAACAAAAAAACCCAAATCCAAACCCCAAACCAGCCCCCCCCCCCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAAAAAACCCAAATCCAAACCCCAAACCAGCCCCCCCCCCCAAAA  150

seq1  AAAAAAAGTGAATAGAAAATATTGTAAGACCATAGGGAAAGTATCACGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGTGAATAGAAAATATTGTAAGACCATAGGGAAAGTATCACGTG  200

seq1  GCTGGCCATTTAGGGAAGTGATACCAACCAGGAGCCCTTTAGTTTGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCATTTAGGGAAGTGATACCAACCAGGAGCCCTTTAGTTTGGGTT  250

seq1  TTTAAAGCAGCCTTTGGGATTTACCCTATACACAAGGTGGATAAGGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCAGCCTTTGGGATTTACCCTATACACAAGGTGGATAAGGAGGC  300

seq1  CATAGTTGCATCTTAAGTATATGCCTGGCACTGACTAGAGGAAGCGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTTGCATCTTAAGTATATGCCTGGCACTGACTAGAGGAAGCGACTG  350

seq1  GACTCTTCTGTGGAGGTATCAGTGAACAGTCTACCTTAAAGGCTATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTCTGTGGAGGTATCAGTGAACAGTCTACCTTAAAGGCTATTTAT  400

seq1  TTATTTTAGTTAGCTTACAGAGTAGCAAGTTTCTTGACAACATTTCCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAGTTAGCTTACAGAGTAGCAAGTTTCTTGACAACATTTCCATA  450

seq1  CCTCATTGGCTGGGTTCCTCCCTGTTCCTCACTGCATCTCCTGCCTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTGGCTGGGTTCCTCCCTGTTCCTCACTGCATCTCCTGCCTTCCT  500

seq1  TTCCCTTCTGTATCCTTTAGTTCCCAGAATCCCTTTTTCCAATTTCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCTGTATCCTTTAGTTCCCAGAATCCCTTTTTCCAATTTCATAT  550

seq1  CAAATGTGTCTTCTCCACCCTACCCCAGAATGCCTATTTGCTTCCTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGTCTTCTCCACCCTACCCCAGAATGCCTATTTGCTTCCTATCT  600

seq1  CAGGGCCCCTTTCTAATCTCCTACACTTTTTCTAAACTTCCACTTCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCCCTTTCTAATCTCCTACACTTTTTCTAAACTTCCACTTCTCCT  650

seq1  CCTTCTCCTTCTTCTTTCTATTCTGCTTCATCTTAAGCATCTTCTCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCTTCTTCTTTCTATTCTGCTTCATCTTAAGCATCTTCTCTTCC  700

seq1  TCCTCCTTCTCCTTCATTGTTTTCTTCTCTTCCTTCTCCTTCTTGTTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTTCTCCTTCATTGTTTTCTTCTCTTCCTTCTCCTTCTTGTTCCT  750

seq1  CCCCCCTCCTCCTTTTATTCTTTTTCTTTTTGGCATCATTTGTTTTAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTCCTCCTTTTATTCTTTTTCTTTTTGGCATCATTTGTTTTAGAC  800

seq1  CCGGAATATGAGCACGGCTCCTGGAAAGGGCCAGATCTGTGTCTTTGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAATATGAGCACGGCTCCTGGAAAGGGCCAGATCTGTGTCTTTGTCT  850

seq1  AGAGAGCAACCCCTTGCTTATGCATTCTGTTCTCATTCACAAGTCTTAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCAACCCCTTGCTTATGCATTCTGTTCTCATTCACAAGTCTTAGC  900

seq1  TAAGCTAGGTCATCATGATCTATTTAAGGAACAGAATGCATTTAGCTATG  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAAGCTAGGTCATCATGATCTATTT-AGGAACAGAATGCATTTAGCTATG  949

seq1  ATCTATGTCTAAATATGCCCTGCTTCTCAAAAAAAAAAAAACCCACTAGG  1000
      |||||||||| ||||||||||||||||||||||||||||||||||||| |
seq2  ATCTATGTCT-AATATGCCCTGCTTCTCAAAAAAAAAAAAACCCACTA-G  997

seq1  ATTTGTGATCTAAATGAAGTAATGGAACCAAAGCCAGAATTTTGGTGTTT  1050
      |||||||||||||||||       | | || || |||| || ||    ||
seq2  ATTTGTGATCTAAATGA-------GTATCACAG-CAGATTTGTG----TT  1035

seq1  GATCCTAGTCTCTGGCTCAAAGATCTAGATTTTGTGCCAGTAGATAATAT  1100
      ||||||||||||| |||| |||||||||| |||||| |||||||||||||
seq2  GATCCTAGTCTCT-GCTC-AAGATCTAGAATTTGTG-CAGTAGATAATAT  1082

seq1  T  1101
      |
seq2  T  1083

seq1: chr8_98615183_98616228
seq2: B6Ng01-335I09.g_66_1104 (reverse)

seq1  CTTCACTCTGTAAGCACCGCAACTTTCCACTATTGTG-TTAGGCAGTCTC  49
      |||| |||| |||||||||  ||||||||||| |||| || |||||||||
seq2  CTTCCCTCT-TAAGCACCGGCACTTTCCACTA-TGTGTTTGGGCAGTCTC  48

seq1  TTATCATC-ACTGTGATAAATTTCTACTCACCAGAGGAAATGATCTTAGT  98
       ||||||| |||||||||||||||||||||||||||  || |||||||| 
seq2  -TATCATCAACTGTGATAAATTTCTACTCACCAGAG--AAAGATCTTAG-  94

seq1  TCATAGTTACGGAGGTTTCTGACATGGTTGTCTAGCTCTATTTATTTCAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTTACGGAGGTTTCTGACATGGTTGTCTAGCTCTATTTATTTCAG  144

seq1  GACCATTGTAAGACAGAACTTCATTGCGCAATCTGCATGGAGGAGGAAAG  198
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  GACCA-TGTAAGACAG-ACTTCATTGCGCAATCTGCATGGAGGAGGAAAG  192

seq1  CTGATTGTCTCATGGAAACCAGGAAGAAGGGATCCGGAAGAATTTGCTGG  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTGATTGTCTCATGGAAACCA-GAAGAAGGGATCCGGAAGAATTTGCTGG  241

seq1  GGGTAAACATCCTTCAAGAGCAGTTCCCCAGTGACTTACTTTCTCCAAAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAACATCCTTCAAGAGCAGTTCCCCAGTGACTTACTTTCTCCAAAT  291

seq1  AGGCTCCCCAAATTTCTACCACCTTCCATTAGGCCCTGAAGCTACAAATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCCCAAATTTCTACCACCTTCCATTAGGCCCTGAAGCTACAAATC  341

seq1  TGTGCATGGAGTGATGCATGCGTGAGGTCAGAGCTCTCACAGTCTAGTGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGGAGTGATGCATGCGTGAGGTCAGAGCTCTCACAGTCTAGTGG  391

seq1  ATTTTCAAATGTACCACATTGAATTGTTGCTATCCAGGGAGAACATCCGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAATGTACCACATTGAATTGTTGCTATCCAGGGAGAACATCCGA  441

seq1  AATCCAAACCATAACATCCAGGAAAGCTGAAAACAAAATTCTAATTGTTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAACCATAACATCCAGGAAAGCTGAAAACAAAATTCTAATTGTTC  491

seq1  AAAGGCTGGAAGATGGCTCAGCAGTTAAAAGCATTGGTTTCTCATCCAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGGAAGATGGCTCAGCAGTTAAAAGCATTGGTTTCTCATCCAGA  541

seq1  AATTCTGAGTTCAATTCCTAGTTATCACATGGTGGCTCACAACCATCTGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGAGTTCAATTCCTAGTTATCACATGGTGGCTCACAACCATCTGC  591

seq1  TATGGACTCTGATTCCCTCTTCTGGTGTGCATGAAAACAGAGCATATTAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGACTCTGATTCCCTCTTCTGGTGTGCATGAAAACAGAGCATATTAT  641

seq1  ATATATATATATATATATATATATATATATATATATATATATATATATGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATATATATGT  691

seq1  ATATTAAGTGTATAAAACTTTAAAAAAGTCTAATAGTTCTAAATGTTTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAGTGTATAAAACTTTAAAAAAGTCTAATAGTTCTAAATGTTTTT  741

seq1  GATGAGCCAGCCTCCAGCCTCACCAGCAGTTACTTTAATGAGGTTCAGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCCAGCCTCCAGCCTCACCAGCAGTTACTTTAATGAGGTTCAGTT  791

seq1  TACTGAACTTAGAGGATTTTTGTTTTTTCTTCTCTACTTCAAACAGTTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAACTTAGAGGATTTTTGTTTTTTCTTCTCTACTTCAAACAGTTTT  841

seq1  GCCTATTCAAAGAGTTACTAATCCTCCATATTCCATTTTATTCTAGAAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTCAAAGAGTTACTAATCCTCCATATTCCATTTTATTCTAGAAGT  891

seq1  CTTATCATTTCATCTTTCTCATTTATGCCTGCAATGTTCTTCAAGTTAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCATTTCATCTTTCTCATTTATGCCTGCAATGTTCTTCAAGTTAAT  941

seq1  ATTGCCCTTTGTATGAAATGTGAGTCAATATGTGATTTTGTTGTTTTCAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCCTTTGTATGAAATGTGAGTCAATATGTGATTTTGTTGTTTTCAT  991

seq1  ATAAGCATTGAATTGACCATATTCATTAGTTTTCCTCTTATGGAATTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATTGAATTGACCATATTCATTAGTTTTCCTCTTATGGAATTC  1039

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information