BAC Information

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BAC

Clone NameB6Ng01-335K22
Chromosome8 (Build37)
Map Location 91,288,961 - 91,404,513
singlet/doubletdoublet
Overlap geneLOC675985
Upstream geneZfp423, LOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld
Downstream geneSall1, LOC100041089, EG625801, EG384862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335K22.bB6Ng01-335K22.g
ACCGA120831GA120832
length8811,128
definitionB6Ng01-335K22.b B6Ng01-335K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,288,961 - 91,289,658)(91,403,387 - 91,404,513)
sequence
gaattctttgttcagttctgagccccaatttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatattgggtattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacatgccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgg
cttgccgttctcttaaagcctctgctgatcacagaaggcccaccagcaca
tggggggctgtgtgcttacccaaagttttcttgagtcacctagtggagga
gcgtggcttctcagtattcatttgagcttgatttttttttcttcctatag
agttttatagctctcagcacacaaattcttcataaaaaatattagatcca
ttttgaagccattataaatactctttgtaaagtttttatttattttgcgc
gcgcgtgtgtgtgtgtgtgttgtgtgtgtgt
gaattccaggctatgacagggacagatgcaggtctgccttagcgtgaaag
tgaacatctgaccacgtgaccacacctgcaccgacatttcattgactctg
aggctccctagtactgtctgagtcaatccagagactgctggacagtgaga
aaataacaatgtccagaggtaaggacgcctgcccctgtgggaacaatcag
gacttgatcccctggggcctcagtttccctgactgtgaccacattagttc
tcagattgtctgtgaaggagaagttcctataggcggtgaagtcaccagaa
actgggtggcaataatcccgatcctagtgcttcacgcagacgaaccccgc
tggttgctcaggtagaggaagccagaggccgtgagccccatccccataaa
gatctgacatcttccctaaaggatccagtgtctggcggggtgtgggggag
gagcaaagaacggtaactgcagtggctagctttggctgtgagaaacagcg
gcctaaaataacaagatttcaacacgatcagcctttatctctcttccaca
tgaaagccgggaagttggccagccaggcctggtgtggctgctcagcagca
tgaagtccttggggacccagtttcctcccagctcacggctccccatcctt
agggtcatgggggcagctctgtcaccactttccaacatggcagccaatgg
atcaacagtccaagaaatgacaaagagggagccaagaaagatggggacag
ggacacaagccaattctcatcttccttttaaaaaggaaaaaaaaaaacaa
acctttttattttaaaatagttttagatgcacagaaaaaaatgtaataat
agcaccaagtgttgtcatagaatccataacccagtttccccaaatattaa
tatcttaggttatattataatactgttgactaagtccatgctttgtagat
ttttttagtttctgccaacatcattcttctgtcccaggatcttaccagat
gctggcaggagtactgggcaggtgctttgcagaatgtcctcaactgtaat
aatgtctaatgcttttctcatggagtggatggggctcctggggctctggg
aaagaagactagagaaacacaactagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_91288961_91289658
seq2: B6Ng01-335K22.b_231_927

seq1  AAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGC  50

seq1  ACATGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTT  100

seq1  CAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTT  150

seq1  ATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAA  200

seq1  GTATGGATCGATTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGATCGATTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGC  250

seq1  ACCAATTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCC  300

seq1  TTGTCGAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCGAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTC  350

seq1  AATTCTATTCCATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTATTCCATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAG  400

seq1  TTTTTATCACAATTGGCTTGCCGTTCTCTTAAAGCCTCTGCTGATCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCACAATTGGCTTGCCGTTCTCTTAAAGCCTCTGCTGATCACAG  450

seq1  AAGGCCCACCAGCACATGGGGGGCTGTGTGCTTACCCAAAGTTTTCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCACCAGCACATGGGGGGCTGTGTGCTTACCCAAAGTTTTCTTGA  500

seq1  GTCACCTAGTGGAGGAGCGTGGCTTCTCAGTATTCATTTGAGCTTGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTAGTGGAGGAGCGTGGCTTCTCAGTATTCATTTGAGCTTGATTT  550

seq1  TTTTTTCTTCCTATAGAGTTTTATAGCTCTCAGCACACAAATTCTTCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTCCTATAGAGTTTTATAGCTCTCAGCACACAAATTCTTCATA  600

seq1  AAAAATATTAGATCCATTTTGAAGCCATTATAAATACTCTTTGTAAAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTAGATCCATTTTGAAGCCATTATAAATACTCTTTGTAAAGTT  650

seq1  TTTATTTATTTTGCGCGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGT  698
      |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTATTTATTTTGCGCGCGCGTGTGTGTGTGTGTGT-TGTGTGTGTGT  697

seq1: chr8_91403387_91404513
seq2: B6Ng01-335K22.g_69_1196 (reverse)

seq1  GGCTAG-TGTGTTTCTCTAGTCTTCTCT-CCAGAGCCC--AGAGCCCCAA  46
      |||||| ||||||||||||||||||| | |||||||||   ||||||| |
seq2  GGCTAGTTGTGTTTCTCTAGTCTTCTTTCCCAGAGCCCCAGGAGCCCC-A  49

seq1  CCCACT-CATGAGAAAAGCATTAGACA-TATTACAGTTGAAGGACATTCT  94
       ||||| |||||||||||||||||||| ||||||||||| ||||||||||
seq2  TCCACTCCATGAGAAAAGCATTAGACATTATTACAGTTG-AGGACATTCT  98

seq1  GCAAAGCACCTGCCCAGTACTCCTGCCAAGCATCTGGTAAGATCCTGGGA  144
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCAAAGCACCTGCCCAGTACTCCTGCC-AGCATCTGGTAAGATCCTGGGA  147

seq1  CAGAAGAATGATGTTGGGCAGAAACTAAAAAAATCTAACAAAGCATGGAC  194
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  CAGAAGAATGATGTT-GGCAGAAACTAAAAAAATCT-ACAAAGCATGGAC  195

seq1  TTTAGTCAACAGTATTATAATATAACCTAAGATATTAATATTTGGGGAAA  244
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTAGTCAACAGTATTATAATATAACCTAAGATATTAATATTTGGGGAAA  244

seq1  CTGGGTTATGGATTCTATGACAACACTTGGTGCTATTATTACATTTTTTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTATGGATTCTATGACAACACTTGGTGCTATTATTACATTTTTTT  294

seq1  CTGTGCATCTAAAACTATTTTAAAAT-AAAAGGTTTGTTTTTTTTTTTCC  343
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGTGCATCTAAAACTATTTTAAAATAAAAAGGTTTGTTTTTTTTTTTCC  344

seq1  TTTTTAAAAGGAAGATGAGAATTGGCTTGTGTCCCTGTCCCCATCTTTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAGGAAGATGAGAATTGGCTTGTGTCCCTGTCCCCATCTTTCT  394

seq1  TGGCTCCCTCTTTGTCATTTCTTGGACTGTTGATCCATTGGCTGCCATGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCCTCTTTGTCATTTCTTGGACTGTTGATCCATTGGCTGCCATGT  444

seq1  TGGAAAGTGGTGACAGAGCTGCCCCCATGACCCTAAGGATGGGGAGCCGT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGTGGTGACAGAGCTGCCCCCATGACCCTAAGGATGGGGAGCCGT  494

seq1  GAGCTGGGAGGAAACTGGGTCCCCAAGGACTTCATGCTGCTGAGCAGCCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGAGGAAACTGGGTCCCCAAGGACTTCATGCTGCTGAGCAGCCA  544

seq1  CACCAGGCCTGGCTGGCCAACTTCCCGGCTTTCATGTGGAAGAGAGATAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGCCTGGCTGGCCAACTTCCCGGCTTTCATGTGGAAGAGAGATAA  594

seq1  AGGCTGATCGTGTTGAAATCTTGTTATTTTAGGCCGCTGTTTCTCACAGC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGATCGTGTTGAAATCTTGTTATTTTAGGCCGCTGTTTCTCACAGC  644

seq1  CAAAGCTAGCCACTGCAGTTACCGTTCTTTGCTCCTCCCCCACACCCCGC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTAGCCACTGCAGTTACCGTTCTTTGCTCCTCCCCCACACCCCGC  694

seq1  CAGACACTGGATCCTTTAGGGAAGATGTCAGATCTTTATGGGGATGGGGC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACTGGATCCTTTAGGGAAGATGTCAGATCTTTATGGGGATGGGGC  744

seq1  TCACGGCCTCTGGCTTCCTCTACCTGAGCAACCAGCGGGGTTCGTCTGCG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGCCTCTGGCTTCCTCTACCTGAGCAACCAGCGGGGTTCGTCTGCG  794

seq1  TGAAGCACTAGGATCGGGATTATTGCCACCCAGTTTCTGGTGACTTCACC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCACTAGGATCGGGATTATTGCCACCCAGTTTCTGGTGACTTCACC  844

seq1  GCCTATAGGAACTTCTCCTTCACAGACAATCTGAGAACTAATGTGGTCAC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATAGGAACTTCTCCTTCACAGACAATCTGAGAACTAATGTGGTCAC  894

seq1  AGTCAGGGAAACTGAGGCCCCAGGGGATCAAGTCCTGATTGTTCCCACAG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGGAAACTGAGGCCCCAGGGGATCAAGTCCTGATTGTTCCCACAG  944

seq1  GGGCAGGCGTCCTTACCTCTGGACATTGTTATTTTCTCACTGTCCAGCAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGCGTCCTTACCTCTGGACATTGTTATTTTCTCACTGTCCAGCAG  994

seq1  TCTCTGGATTGACTCAGACAGTACTAGGGAGCCTCAGAGTCAATGAAATG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGATTGACTCAGACAGTACTAGGGAGCCTCAGAGTCAATGAAATG  1044

seq1  TCGGTGCAGGTGTGGTCACGTGGTCAGATGTTCACTTTCACGCTAAGGCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGCAGGTGTGGTCACGTGGTCAGATGTTCACTTTCACGCTAAGGCA  1094

seq1  GACCTGCATCTGTCCCTGTCATAGCCTGGAATTC  1127
      ||||||||||||||||||||||||||||||||||
seq2  GACCTGCATCTGTCCCTGTCATAGCCTGGAATTC  1128