BAC Information

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BAC

Clone NameB6Ng01-336K02
Chromosome8 (Build37)
Map Location 13,965,730 - 14,064,507
singlet/doubletdoublet
Overlap gene2610019F03Rik, EG546036, Erich1
Upstream geneMcf2l, F7, F10, Proz, Pcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2, Tmco3, Tfdp1, Atp4b, Grk1, Gm687, Gas6, LOC434282, 1700029H14Rik, Rasa3, 4932443I19Rik, LOC665516, Cdc16, Upf3a, AF366264, D8Ertd457e, 2410022L05Rik, EG665536, Fbxo25, LOC100041103
Downstream geneDlgap2, LOC100041140, C030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-336K02.bB6Ng01-336K02.g
ACCGA121497GA121498
length1,1151,036
definitionB6Ng01-336K02.b B6Ng01-336K02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,063,381 - 14,064,507)(13,965,730 - 13,966,765)
sequence
gaattcagtgtttatgacagtgatttggttttattgagttacttgatttc
ttgtcttcactgaattttattggagaaaccatgctaatgtaatcaggaca
aataactgtctgcttgtattctgtaatatttactagcgcttgctgagccc
cccccccttgttttacagatggtgacattaagatccagcctgaacgtcgg
ctctacactgtgagtttgcctcctcaagggtatatcccctgtttgcccga
accgaccagctgtgcggattctgagaatgcctccagcggtggtgacacag
aaggtaaaaagtctgggcaggagggaaatggagcctgtttccatcatgat
tttctgtattgcaccattttttagtcttgtaaattagctttaaactgata
agttgatgggtatgagtaagcatggtactgtatacccaatcatatactgg
gctgttagatatttcacagccattacaaatgattacaaactcgcaataac
agaggagaacttgggccaggaacttgcggcttggatgaggttatgagctc
atttgtcgacacacgagtagtctggactagagagctctgcattgctggca
ttggtcttgctttagtagaacttgggccatgattttctaagctttttcaa
atttgctaataactataaaatgaaagaatcaacttatttttatctgtctt
gagaagagattagcctattataattgtgtttattgttgaatgacttcttg
aaagagagtatgatatttaactcagttcactattgagtaagagtgttagt
gtttccaaatgttatgtttttatcttaaaatcaaaatggttgagttttcc
ctttgaatattcaatttgaaaactttttaaagaggaacctatagtcttta
aaaacagattcccgcagcttaggatgactcctatcaagtaaaattgggaa
gtctttatcctaaatattagttaatttgactatcaagaagtgtgggtttt
gtacacatacatcttttctggcttcctaatcagaaagtcagaaccactta
gagttggatactaggagccacatagttcctgtttcagctctgtgagtctt
gaaatttatcagatg
gaattcagttgaataaaaatgccaaaacaaatcacatctaatacacagac
caaaggtatgtgatctgtgtttacaaatcacagcaataatctaaattact
cttacaaaatgaacttagaaaggtaaggtgcacatgcttattagacaaag
aagaactggggtaatcacacatcgttagacaatcctccaaggcctccgga
aaatcacagaatgtaggcacagcagccatggcaacccccacctccagctc
ttcagaagcctatggcggaggcagcggtgactggggctcatcagccctgg
gtcagagctgggcggcctcacagcaagcagacagatgcaaacactgagag
aaagaaaggacctcacacctgtaacctgagctcccacctgcagagttgga
aaaagaagggcaggtaggtgaacctcaagcaggcatttgggagacacaga
gaccaggtcagggacaaacagatggacagacaataataatacaggtcaaa
tcagaaaaactgacgataaaaaaaaaaaaaaaggatgggaatgctggggg
cttgtgcctgaggtcccaggtcctggggcagaaagatcacttgagcctct
aagttcaagatcagcccggctcaaaactggataatctgactcaaaggatc
acaaacaaaactgacacatttaattaactgaaggaaacaaagattcacat
tgctcaggctaagaaagagaaaggaaacattactccagaacatgataaat
agctgagaattaacataacttatatcaaaatgaacagattcctgtgaaca
cacaaaggactagacatttcaagaagcaatagaaaatgtgaacagttcta
aaacaagcaaagagaaacaaatagtaaaaaatgtctccagggctggagag
atggctcagcgggtaagagcactgactgctctttctgagttcaattccca
gcaaccacatggtggctcacaaccatctgtaatgggatccaatgccctct
tttggtgtgtctgaagacagtgacagtttactcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_14063381_14064507
seq2: B6Ng01-336K02.b_46_1160 (reverse)

seq1  CATCTGATAATATTTCAAAGACTTCCAACAGAGCTTGAAACAGGGACTAT  50
      |||||||||| ||||| ||||||    ||||||| ||||||||| |||||
seq2  CATCTGATAA-ATTTC-AAGACT---CACAGAGC-TGAAACAGGAACTAT  44

seq1  GTGGCTCCTAAGTTATTCCAACTCCTAAGTGGTTCTGACTTTCTGATTAG  100
      ||||||||| |||   ||||||| ||||||||||||||||||||||||||
seq2  GTGGCTCCT-AGT--ATCCAACT-CTAAGTGGTTCTGACTTTCTGATTAG  90

seq1  GAAGCCAG-AAAGATGTATGTGTTACAAAACCCACAACTTCTTGATAGTC  149
      |||||||| ||||||||||||| |||||||||||| ||||||||||||||
seq2  GAAGCCAGAAAAGATGTATGTG-TACAAAACCCAC-ACTTCTTGATAGTC  138

seq1  AAATTAACTAATATTTAGGATAAAGACTTTCCCAATTTTACTTGATAGGA  199
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAATTAACTAATATTTAGGATAAAGAC-TTCCCAATTTTACTTGATAGGA  187

seq1  GTCATCCTAAGCTGCGGGAATCTGTTTTTAAAGACTATAGGTTCCTCTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCTAAGCTGCGGGAATCTGTTTTTAAAGACTATAGGTTCCTCTTT  237

seq1  AAAAAGTTTTCAAATTGAATATTCAAAGGGAAAACTCAACCATTTTGATT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTTTTCAAATTGAATATTCAAAGGGAAAACTCAACCATTTTGATT  287

seq1  TTAAGATAAAAACATAACATTTGGAAACACTAACACTCTTACTCAATAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATAAAAACATAACATTTGGAAACACTAACACTCTTACTCAATAGT  337

seq1  GAACTGAGTTAAATATCATACTCTCTTTCAAGAAGTCATTCAACAATAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAGTTAAATATCATACTCTCTTTCAAGAAGTCATTCAACAATAAA  387

seq1  CACAATTATAATAGGCTAATCTCTTCTCAAGACAGATAAAAATAAGTTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTATAATAGGCTAATCTCTTCTCAAGACAGATAAAAATAAGTTGA  437

seq1  TTCTTTCATTTTATAGTTATTAGCAAATTTGAAAAAGCTTAGAAAATCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCATTTTATAGTTATTAGCAAATTTGAAAAAGCTTAGAAAATCAT  487

seq1  GGCCCAAGTTCTACTAAAGCAAGACCAATGCCAGCAATGCAGAGCTCTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAAGTTCTACTAAAGCAAGACCAATGCCAGCAATGCAGAGCTCTCT  537

seq1  AGTCCAGACTACTCGTGTGTCGACAAATGAGCTCATAACCTCATCCAAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGACTACTCGTGTGTCGACAAATGAGCTCATAACCTCATCCAAGC  587

seq1  CGCAAGTTCCTGGCCCAAGTTCTCCTCTGTTATTGCGAGTTTGTAATCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAAGTTCCTGGCCCAAGTTCTCCTCTGTTATTGCGAGTTTGTAATCAT  637

seq1  TTGTAATGGCTGTGAAATATCTAACAGCCCAGTATATGATTGGGTATACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATGGCTGTGAAATATCTAACAGCCCAGTATATGATTGGGTATACA  687

seq1  GTACCATGCTTACTCATACCCATCAACTTATCAGTTTAAAGCTAATTTAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATGCTTACTCATACCCATCAACTTATCAGTTTAAAGCTAATTTAC  737

seq1  AAGACTAAAAAATGGTGCAATACAGAAAATCATGATGGAAACAGGCTCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAAAAAATGGTGCAATACAGAAAATCATGATGGAAACAGGCTCCA  787

seq1  TTTCCCTCCTGCCCAGACTTTTTACCTTCTGTGTCACCACCGCTGGAGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTCCTGCCCAGACTTTTTACCTTCTGTGTCACCACCGCTGGAGGC  837

seq1  ATTCTCAGAATCCGCACAGCTGGTCGGTTCGGGCAAACAGGGGATATACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAGAATCCGCACAGCTGGTCGGTTCGGGCAAACAGGGGATATACC  887

seq1  CTTGAGGAGGCAAACTCACAGTGTAGAGCCGACGTTCAGGCTGGATCTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGAGGCAAACTCACAGTGTAGAGCCGACGTTCAGGCTGGATCTTA  937

seq1  ATGTCACCATCTGTAAAACAAGGGGGGGGGGCTCAGCAAGCGCTAGTAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACCATCTGTAAAACAAGGGGGGGGGGCTCAGCAAGCGCTAGTAAA  987

seq1  TATTACAGAATACAAGCAGACAGTTATTTGTCCTGATTACATTAGCATGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAGAATACAAGCAGACAGTTATTTGTCCTGATTACATTAGCATGG  1037

seq1  TTTCTCCAATAAAATTCAGTGAAGACAAGAAATCAAGTAACTCAATAAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCAATAAAATTCAGTGAAGACAAGAAATCAAGTAACTCAATAAAA  1087

seq1  CCAAATCACTGTCATAAACACTGAATTC  1127
      ||||||||||||||||||||||||||||
seq2  CCAAATCACTGTCATAAACACTGAATTC  1115

seq1: chr8_13965730_13966765
seq2: B6Ng01-336K02.g_63_1098

seq1  GAATTCAGTTGAATAAAAATGCCAAAACAAATCACATCTAATACACAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTGAATAAAAATGCCAAAACAAATCACATCTAATACACAGAC  50

seq1  CAAAGGTATGTGATCTGTGTTTACAAATCACAGCAATAATCTAAATTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTATGTGATCTGTGTTTACAAATCACAGCAATAATCTAAATTACT  100

seq1  CTTACAAAATGAACTTAGAAAGGTAAGGTGCACATGCTTATTAGACAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAAATGAACTTAGAAAGGTAAGGTGCACATGCTTATTAGACAAAG  150

seq1  AAGAACTGGGGTAATCACACATCGTTAGACAATCCTCCAAGGCCTCCGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTGGGGTAATCACACATCGTTAGACAATCCTCCAAGGCCTCCGGA  200

seq1  AAATCACAGAATGTAGGCACAGCAGCCATGGCAACCCCCACCTCCAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAGAATGTAGGCACAGCAGCCATGGCAACCCCCACCTCCAGCTC  250

seq1  TTCAGAAGCCTATGGCGGAGGCAGCGGTGACTGGGGCTCATCAGCCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGCCTATGGCGGAGGCAGCGGTGACTGGGGCTCATCAGCCCTGG  300

seq1  GTCAGAGCTGGGCGGCCTCACAGCAAGCAGACAGATGCAAACACTGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGCTGGGCGGCCTCACAGCAAGCAGACAGATGCAAACACTGAGAG  350

seq1  AAAGAAAGGACCTCACACCTGTAACCTGAGCTCCCACCTGCAGAGTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGGACCTCACACCTGTAACCTGAGCTCCCACCTGCAGAGTTGGA  400

seq1  AAAAGAAGGGCAGGTAGGTGAACCTCAAGCAGGCATTTGGGAGACACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGGGCAGGTAGGTGAACCTCAAGCAGGCATTTGGGAGACACAGA  450

seq1  GACCAGGTCAGGGACAAACAGATGGACAGACAATAATAATACAGGTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGTCAGGGACAAACAGATGGACAGACAATAATAATACAGGTCAAA  500

seq1  TCAGAAAAACTGACGATAAAAAAAAAAAAAAAGGATGGGAATGCTGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAACTGACGATAAAAAAAAAAAAAAAGGATGGGAATGCTGGGGG  550

seq1  CTTGTGCCTGAGGTCCCAGGTCCTGGGGCAGAAAGATCACTTGAGCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGCCTGAGGTCCCAGGTCCTGGGGCAGAAAGATCACTTGAGCCTCT  600

seq1  AAGTTCAAGATCAGCCCGGCTCAAAACTGGATAATCTGACTCAAAGGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAAGATCAGCCCGGCTCAAAACTGGATAATCTGACTCAAAGGATC  650

seq1  ACAAACAAAACTGACACATTTAATTAACTGAAGGAAACAAAGATTCACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAACTGACACATTTAATTAACTGAAGGAAACAAAGATTCACAT  700

seq1  TGCTCAGGCTAAGAAAGAGAAAGGAAACATTACTCCAGAACATGATAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGCTAAGAAAGAGAAAGGAAACATTACTCCAGAACATGATAAAT  750

seq1  AGCTGAGAATTAACATAACTTATATCAAAATGAACAGATTCCTGTGAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGAATTAACATAACTTATATCAAAATGAACAGATTCCTGTGAACA  800

seq1  CACAAAGGACTAGACATTTCAAGAAGCAATAGAAAATGTGAACAGTTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGGACTAGACATTTCAAGAAGCAATAGAAAATGTGAACAGTTCTA  850

seq1  AAACAAGCAAAGAGAAACAAATAGTAAAAAATGTCTCCAGGGCTGGAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGCAAAGAGAAACAAATAGTAAAAAATGTCTCCAGGGCTGGAGAG  900

seq1  ATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTTCTGAGTTCAATTCCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCAGCGGGTAAGAGCACTGACTGCTCTTTCTGAGTTCAATTCCCA  950

seq1  GCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCAATGCCCTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCCAATGCCCTCT  1000

seq1  TTTGGTGTGTCTGAAGACAGTGACAGTTTACTCACA  1036
      ||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGTGTCTGAAGACAGTGACAGTTTACTCACA  1036