BAC Information

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BAC

Clone NameB6Ng01-337C07
Chromosome8 (Build37)
Map Location 60,734,474 - 60,735,633
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
Downstream gene4930431L04Rik, BC030500, LOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337C07.bB6Ng01-337C07.g
ACCGA121858GA121859
length1,139279
definitionB6Ng01-337C07.b B6Ng01-337C07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggattaaggaatagatttgtttgagaaatttagggttttctt
cggtgtctgtagttttttttttaaagcattggcagcaaaagcttcaaaaa
gaatataactgaagcagaatgaagttttgtttgagaatatctttgcatag
gaaatggcacatcattatgaagagaagctcaaacttcgaagtagggaaac
tatgaattaaaagaactgataattttctgcaaactgccaccaatatttta
ataatttccaaatcattagagagactcttttgaacttcccctgtctggct
gaaaaaacgttataagatcccagctgttataaattctactaactaggaaa
tactaactctcaggaaaaaaaaaaaaaaaaacaacaaatgtcaaaaacat
cctgacaagttgatactttgtctatttttgtgcagactgtcatgtaggtt
tcctacaagtaaggatattagtgttccttcataaaagtgataaattagat
ttctatttaagctgcaaattatttcactattaatcatcattatcatgtaa
tgaataacaatcttacagatgccaattacagaatgtcctgcataatggca
gatcagacagtgatggaccacatatgcaaaggtagttccacaagagtatt
ccagagcagaaatatctctaccaattattgatgttgtatctgtcaaaacc
attgctcagatccattattcatgtcaatgaaaaataacaactttgtgtta
aaagatacaagaagacagtttattctggcccagtatgcatattcaaggcc
atggaacatggattcaagttttcccacataccatttttcacccaccacag
gggcatgtgtaaattttaaaactcacaggacaaaattaaattataaagca
gtatattaccaaatacatcagtaggtatatgaagcaagcaaacttcagta
agtcagacatgttttctgtggtcttgagcctatcttttttaacattcctt
gctttaggatgtgagtagaagtctgccaggtcagcaaaacatttctagag
ttgttatagccagtcatgaacaagagtagaggtaatgtctttcaagttta
taagaagctgagtatgggctctgatcaacagtccctatt

tatagttaaacaagagataggtaggtagggagttaggtagataggtaggt
agatagatagattatagattatagatggtagatagttgactggtaggtag
atatattaatgatagaaaaatgataggtagagaggtagataaatagatga
tggagagatagagagatagatggatgggtagattggtaaatacaaagtca
tggcagaggataggtgcatagatgttgttcgcttttttttgatcttttcc
cttttttcattctctcctcccccctatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_60734474_60735633
seq2: B6Ng01-337C07.b_46_1184 (reverse)

seq1  AATAAGGACTGTTGTGAATCAAGAACCCAAATTACTCTGGGCTATCTTAT  50
      |||| |||||||||   ||| ||| ||||   |||||   ||| ||||||
seq2  AATAGGGACTGTTG---ATC-AGAGCCCA---TACTC--AGCT-TCTTAT  40

seq1  AAACTTTTGAAGACATTACCTCTACTCTTTGGTCATGACT-GCTATAACA  99
      |||| ||  |||||||||||||||||| ||| |||||||| |||||||||
seq2  AAAC-TTGAAAGACATTACCTCTACTC-TTGTTCATGACTGGCTATAACA  88

seq1  ACTTCTTAGAATGTTTTGCTGAACTTGGCAGACTTCTAACTTCCACCAAT  149
      || |||   |||||||||||| || |||||||||||| |||  |||  ||
seq2  AC-TCTAGAAATGTTTTGCTG-ACCTGGCAGACTTCT-ACT--CAC--AT  131

seq1  CCTAAAAGCAAGGAATGTT-AAAAAGATAGGCTCCAAGGACCACAGAAAA  198
      ||| ||||||||||||||| ||||||||||||||  | ||||||||||||
seq2  CCT-AAAGCAAGGAATGTTAAAAAAGATAGGCTC--AAGACCACAGAAAA  178

seq1  CATGTCTGACTTACTGAAGTTTGCTTGCTTCATATACCTACTGATGTATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGACTTACTGAAGTTTGCTTGCTTCATATACCTACTGATGTATT  228

seq1  TGGTAAATATACTGCTTTATAATTTAATTTTGTCCTGTGAGTTTTAAAAT  298
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGT-AATATACTGCTTTATAATTTAATTTTGTCCTGTGAGTTTTAAAAT  277

seq1  TTACACATGCCCCTGTGGTGGGTGAAAAATGGTATGTGGGAAAACTTGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATGCCCCTGTGGTGGGTGAAAAATGGTATGTGGGAAAACTTGAA  327

seq1  TCCATGTTCCATGGCCTTGAATATGCATACTGGGCCAGAATAAACTGTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTTCCATGGCCTTGAATATGCATACTGGGCCAGAATAAACTGTCT  377

seq1  TCTTGTATCTTTTAACACAAAGTTGTTATTTTTCATTGACATGAATAATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTATCTTTTAACACAAAGTTGTTATTTTTCATTGACATGAATAATG  427

seq1  GATCTGAGCAATGGTTTTGACAGATACAACATCAATAATTGGTAGAGATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGAGCAATGGTTTTGACAGATACAACATCAATAATTGGTAGAGATA  477

seq1  TTTCTGCTCTGGAATACTCTTGTGGAACTACCTTTGCATATGTGGTCCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTCTGGAATACTCTTGTGGAACTACCTTTGCATATGTGGTCCAT  527

seq1  CACTGTCTGATCTGCCATTATGCAGGACATTCTGTAATTGGCATCTGTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCTGATCTGCCATTATGCAGGACATTCTGTAATTGGCATCTGTAA  577

seq1  GATTGTTATTCATTACATGATAATGATGATTAATAGTGAAATAATTTGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTATTCATTACATGATAATGATGATTAATAGTGAAATAATTTGCA  627

seq1  GCTTAAATAGAAATCTAATTTATCACTTTTATGAAGGAACACTAATATCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAATAGAAATCTAATTTATCACTTTTATGAAGGAACACTAATATCC  677

seq1  TTACTTGTAGGAAACCTACATGACAGTCTGCACAAAAATAGACAAAGTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGTAGGAAACCTACATGACAGTCTGCACAAAAATAGACAAAGTAT  727

seq1  CAACTTGTCAGGATGTTTTTGACATTTGTTGTTTTTTTTTTTTTTTTTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGTCAGGATGTTTTTGACATTTGTTGTTTTTTTTTTTTTTTTTCC  777

seq1  TGAGAGTTAGTATTTCCTAGTTAGTAGAATTTATAACAGCTGGGATCTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTAGTATTTCCTAGTTAGTAGAATTTATAACAGCTGGGATCTTA  827

seq1  TAACGTTTTTTCAGCCAGACAGGGGAAGTTCAAAAGAGTCTCTCTAATGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTTTTTTCAGCCAGACAGGGGAAGTTCAAAAGAGTCTCTCTAATGA  877

seq1  TTTGGAAATTATTAAAATATTGGTGGCAGTTTGCAGAAAATTATCAGTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAATTATTAAAATATTGGTGGCAGTTTGCAGAAAATTATCAGTTC  927

seq1  TTTTAATTCATAGTTTCCCTACTTCGAAGTTTGAGCTTCTCTTCATAATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTCATAGTTTCCCTACTTCGAAGTTTGAGCTTCTCTTCATAATG  977

seq1  ATGTGCCATTTCCTATGCAAAGATATTCTCAAACAAAACTTCATTCTGCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCATTTCCTATGCAAAGATATTCTCAAACAAAACTTCATTCTGCT  1027

seq1  TCAGTTATATTCTTTTTGAAGCTTTTGCTGCCAATGCTTTAAAAAAAAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTATATTCTTTTTGAAGCTTTTGCTGCCAATGCTTTAAAAAAAAAA  1077

seq1  CTACAGACACCGAAGAAAACCCTAAATTTCTCAAACAAATCTATTCCTTA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGACACCGAAGAAAACCCTAAATTTCTCAAACAAATCTATTCCTTA  1127

seq1  ATCCTGGAATTC  1160
      ||||||||||||
seq2  ATCCTGGAATTC  1139


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