BAC Information

Click to search

BAC

Clone NameB6Ng01-337G01
Chromosome8 (Build37)
Map Location 6,170,186 - 6,171,244
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623409, LOC669429, LOC100040360
Downstream geneEG665127, EG546032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337G01.bB6Ng01-337G01.g
ACCGA122024GA122025
length1,069253
definitionB6Ng01-337G01.b B6Ng01-337G01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattaaaactgatattttcatcctttattctgccatatatggag
tcaggtagccttagaaataatgctcaaactatgatgagatgagatttaac
attcacactggtgcttgttagggtatttggcctttctcctagtaccaaag
gaactgaattacttcttagttatctaagactcaaatttccatattttact
gctatatagcatctgacctcttccaaaacataggcaaaaattaacaacct
actagaggtatgacttaatagggaagagcttcaattgtctccatcagatg
tgctgatctcagttcctatcacccacatctgttagctcattaccatgaat
acctccatctctggagtttgacacattttcctggccgtcacttctaacca
cctcacagacaaatacccacatacagacacctacacaaacatataatatt
aaaggaaaaattagtaatttaaaaacactagtggcataacttcccttcca
tactggtaaaagatttttcttagaataaaaaagtattggggcaccttatg
gaatttgggtgatgctcctaaagctggaagagcttgggctcataatagag
acctttcatcaagatagtcagaaagattttcatcacagattttgtttggc
tgtctgaattataactacagaagaacatttacactggtaaccagaagtat
tgagggagctagtttaattgaatagtacatataaaggttcaaggattatc
caccacacacaacagttttcttcataattacaaagtgactcattttttca
taccaggtaatataaacatggactaaatattcatatatatatatatatat
atatatatatatatatatatgtatacatatatacacacacacacacacac
acacacacacacacacacacacacacttttggtgtaaagataacttgtga
atcatactttttattcattttagaagtctaccagcctatacaaacaagaa
tacaaatcattacactagttttaaaagaaaaacaaatttgtactaaagga
catggtgtttatcggcttg

aggaaattcttaggcaaatggacagaagtagaaaatatcatcctaagtga
ggtaacccaatcacaaaagaaaacatatcgtatgcactcattgataagtg
gattcaagcccaaaagctccaaataaacaattaacagaccacatgaagct
caacaagaaggaagaccaaagtgttgatacttcagtccttcttagaagaa
taaaatactcacgggagccccagtataggggaatcatgggggggtggggg
gga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_6170186_6171244
seq2: B6Ng01-337G01.b_46_1114

seq1  GAATTCAATTAAAACTGATATTTTCATCCTTTATTCTGCCATATATGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTAAAACTGATATTTTCATCCTTTATTCTGCCATATATGGAG  50

seq1  TCAGGTAGCCTTAGAAATAATGCTCAAACTATGATGAGATGAGATTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAGCCTTAGAAATAATGCTCAAACTATGATGAGATGAGATTTAAC  100

seq1  ATTCACACTGGTGCTTGTTAGGGTATTTGGCCTTTCTCCTAGTACCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACACTGGTGCTTGTTAGGGTATTTGGCCTTTCTCCTAGTACCAAAG  150

seq1  GAACTGAATTACTTCTTAGTTATCTAAGACTCAAATTTCCATATTTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAATTACTTCTTAGTTATCTAAGACTCAAATTTCCATATTTTACT  200

seq1  GCTATATAGCATCTGACCTCTTCCAAAACATAGGCAAAAATTAACAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATAGCATCTGACCTCTTCCAAAACATAGGCAAAAATTAACAACCT  250

seq1  ACTAGAGGTATGACTTAATAGGGAAGAGCTTCAATTGTCTCCATCAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGGTATGACTTAATAGGGAAGAGCTTCAATTGTCTCCATCAGATG  300

seq1  TGCTGATCTCAGTTCCTATCACCCACATCTGTTAGCTCATTACCATGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATCTCAGTTCCTATCACCCACATCTGTTAGCTCATTACCATGAAT  350

seq1  ACCTCCATCTCTGGAGTTTGACACATTTTCCTGGCCGTCACTTCTAACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATCTCTGGAGTTTGACACATTTTCCTGGCCGTCACTTCTAACCA  400

seq1  CCTCACAGACAAATACCCACATACAGACACCTACACAAACATATAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAGACAAATACCCACATACAGACACCTACACAAACATATAATATT  450

seq1  AAAGGAAAAATTAGTAATTTAAAAACACTAGTGGCATAACTTCCCTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAAATTAGTAATTTAAAAACACTAGTGGCATAACTTCCCTTCCA  500

seq1  TACTGGTAAAAGATTTTTCTTAGAATAAAAAAGTATTGGGGCACCTTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTAAAAGATTTTTCTTAGAATAAAAAAGTATTGGGGCACCTTATG  550

seq1  GAATTTGGGTGATGCTCCTAAAGCTGGAAGAGCTTGGGCTCATAATAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGGGTGATGCTCCTAAAGCTGGAAGAGCTTGGGCTCATAATAGAG  600

seq1  ACCTTTCATCAAGATAGTCAGAAAGATTTTCATCACAGATTTTGTTTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCATCAAGATAGTCAGAAAGATTTTCATCACAGATTTTGTTTGGC  650

seq1  TGTCTGAATTATAACTACAGAAGAACATTTACACTGGTAACCAGAAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAATTATAACTACAGAAGAACATTTACACTGGTAACCAGAAGTAT  700

seq1  TGAGGGAGCTAGTTTAATTGAATAGTACATATAAAGGTTCAAGGATTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGAGCTAGTTTAATTGAATAGTACATATAAAGGTTCAAGGATTATC  750

seq1  CACCACACACAACAGTTTTCTTCATAATTACAAAGTGACTCATTTTTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACACAACAGTTTTCTTCATAATTACAAAGTGACTCATTTTTTCA  800

seq1  TACCAGGTAATATAAACATGGACTAAATATTCATATATATATATATATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGTAATATAAACATGGACTAAATATTCATATATATATATATATAT  850

seq1  ATATATATATATATATATATGTATACATATATACACACACACACACACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATGTATACATATATACACACACACACACACAC  900

seq1  ACACACACACACACACACACACACAC-TTTGGTGTAAAGATAACTTGTGA  949
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACTTTTGGTGTAAAGATAACTTGTGA  950

seq1  ATCATAC-TTTTATTCATTTTAG-AGTCTACCAGCCTATACAAAC-AGAA  996
      ||||||| ||||||||||||||| ||||||||||||||||||||| ||||
seq2  ATCATACTTTTTATTCATTTTAGAAGTCTACCAGCCTATACAAACAAGAA  1000

seq1  TA-AAATCATTACACTA-TTTTAAAAG-AAAACAAA-TTGTACTAAAGGA  1042
      || |||||||||||||| ||||||||| |||||||| |||||||||||||
seq2  TACAAATCATTACACTAGTTTTAAAAGAAAAACAAATTTGTACTAAAGGA  1050

seq1  CAT-GTGTTT-TTGGCTTG  1059
      ||| |||||| | ||||||
seq2  CATGGTGTTTATCGGCTTG  1069


| Home | SequenceCutter | Blast | Download |