BAC Information

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BAC

Clone NameB6Ng01-339D09
Chromosome8 (Build37)
Map Location 111,425,397 - 111,425,857
singlet/doubletsinglet
Overlap geneAtbf1
Upstream genenone
Downstream gene4922502B01Rik, Gm1943, LOC100042829, Pmfbp1, Dhx38, Txnl4b, Hp, Dhodh, Pkd1l3, 2400003C14Rik, 4930566A11Rik, D8Ertd587e, LOC668089, LOC672735, Ap1g1, Phlppl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-339D09.bB6Ng01-339D09.g
ACCGA123272GA123273
length1,030455
definitionB6Ng01-339D09.b B6Ng01-339D09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcactcgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaattatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtagagaaagaggaacactcctccactgttggtg
ggattgcaagtttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacatagtactaccagaggatccagcaatacctcttctaggc
atatatccagaagatgtcccaagcggtatgaaggacacatgctccactat
gttcatagaagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaaaatgcaaaatgcaaaaagctccta
acctaaaacatccagaaaatccagatcaaaatgagaagaccaaacctaag
gatgataggtatagaagagagcgaagattcccagcttaaagggccaataa
atatcttcaacaaaattatagatgaaaacgtccctaacctaaagaaagat
atgcccatgaagatacaagaagcctacagaactccaaatagacaggagca
gaaaagaaattcctcccttaacataataatcaaaacaccaaatgccttaa
agaaagaaagaatattaaaagcagaaagggaaaaaggtaaagtaacatat
aaaggaagacctatcagaattacagcagacttcttaccagagactatgaa
agctagaagatcctgggcagatgtcatacagaccctaagagaacataaat
gccaacccagactactatacccagcaaaactctcaattatgatagacaga
gaaaatatattccatgacaaaaacaaattttacacaatatttttccccac
caaattccagccctacaaaggaataataga
ctcctctacacgcatgcagagcccgcgggtgaccgggtttctgcaaaccg
tcctttccctccccagtgtcttatgctcgtgtaacacatgttctctcctt
cggaccacgctgcttatttactctttttgacttttctaaatgagaaagaa
gtctctgattttgctcagcccccacccccacgccctaccccgcaactaca
gctacccattttacctagatacctctttggcccagcagcgcttgtctgct
gtctcttcaacctcctcactctttctcaaaggcccggtgcatcctatctt
ctctcaggacacttcctgtttctgactcttcactgaagtcctttagtatc
tctgtcagtccatagggtattagcaccttttggagagaactctgtatgct
ttcttaattgaaaaatgtttttattttattttacgtgtgtgtgggggggt
tgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_111425397_111425857
seq2: B6Ng01-339D09.g_68_528

seq1  GAATTCCTCCTCTACACGCATGCAGAGCCCGCGGGTGACCGGGTTTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTCTACACGCATGCAGAGCCCGCGGGTGACCGGGTTTCTGC  50

seq1  AAACCGTCCTTTCCCTCCCCAGTGTCTTATGCTCGTGTAACACATGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCGTCCTTTCCCTCCCCAGTGTCTTATGCTCGTGTAACACATGTTCT  100

seq1  CTCCTTCGGACCACGCTGCTTATTTACTCTTTTTGACTTTTCTAAATGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCGGACCACGCTGCTTATTTACTCTTTTTGACTTTTCTAAATGAG  150

seq1  AAAGAAGTCTCTGATTTTGCTCAGCCCCCACCCCCACGCCCTACCCCGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTCTCTGATTTTGCTCAGCCCCCACCCCCACGCCCTACCCCGCA  200

seq1  ACTACAGCTACCCATTTTACCTAGATACCTCTTTGGCCCAGCAGCGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGCTACCCATTTTACCTAGATACCTCTTTGGCCCAGCAGCGCTTG  250

seq1  TCTGCTGTCTCTTCAACCTCCTCACTCTTTCTCAAAGGCCCGGTGCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGTCTCTTCAACCTCCTCACTCTTTCTCAAAGGCCCGGTGCATCC  300

seq1  TATCTTCTCTCAGGACACTTCCTGTTTCTGACTCTTCACTGAAGTCCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCTCTCAGGACACTTCCTGTTTCTGACTCTTCACTGAAGTCCTTT  350

seq1  AGTATCTCTGTCAGTCCATAGGGTATTAGCACCTTTTGGAGAGAACTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTCTGTCAGTCCATAGGGTATTAGCACCTTTTGGAGAGAACTCTG  400

seq1  TATGCTTTCTTAATTGAAAAATGTTTTTATTTTATTTTACGTGTGTGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTTCTTAATTGAAAAATGTTTTTATTTTATTTTACGTGTGTGTGG  450

seq1  GGGGGTTGGGG  461
      |||||||||||
seq2  GGGGGTTGGGG  461