MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-341I14
Chromosome	8 (Build37)
Map Location	24,743,726 - 24,863,446
singlet/doublet	doublet
Overlap gene	LOC100040931, Zmat4
Upstream gene	Polb, Ikbkb, Plat, Ap3m2, Myst3, LOC100042253, Ank1, Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1
Downstream gene	1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5
Link	Open Mouse BAC browser

Click to get alignment info.

name	Polb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18970 MGI:97740
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ikbkb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16150 MGI:1338071
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18791 MGI:97610
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ap3m2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64933 MGI:1929214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myst3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244349 MGI:2442415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042253 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 4 Proteins

name	Ank1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11733 MGI:88024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nkx6-3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74561 MGI:1921811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 13 Proteins

name	Agpat6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102247 MGI:2142716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gins4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109145 MGI:1923847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Golga7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57437 MGI:1931029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Sfrp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20377 MGI:892014
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040931 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Zmat4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320158 MGI:2443497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810011O10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69068 MGI:1916318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Indol1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209176 MGI:2142489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Indo (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15930 MGI:96416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13524 MGI:105986
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11497 MGI:102518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11499 MGI:104730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Polb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21729748 GeneID:18970 MGI:97740
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA directed), beta transcript_id : NM_011130.1

name	Ikbkb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469100 GeneID:16150 MGI:1338071
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inhibitor of kappaB kinase beta transcript_id : NM_010546.1

name	Plat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679374 GeneID:18791 MGI:97610
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plasminogen activator, tissue transcript_id : NM_008872.1

name	Ap3m2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374145 GeneID:64933 MGI:1929214
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adaptor-related protein complex 3, mu 2 subunit transcript_id : NM_029505.2

name	Myst3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487238 GeneID:244349 MGI:2442415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MYST histone acetyltransferase (monocytic leukemia) 3 transcript_id : NM_001081149.1

name	LOC100042253 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258561 GeneID:100042253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 4 Proteins product : similar to Lsm6 protein transcript_id : XM_001477766.1

name	Ank1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13624296 GeneID:11733 MGI:88024
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin 1, erythroid transcript_id : NM_031158.1

name	Nkx6-3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383172 GeneID:74561 MGI:1921811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 13 Proteins product : NK6 transcription factor related, locus 3 (Drosophila) transcript_id : XM_486090.3

name	Agpat6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350728 GeneID:102247 MGI:2142716
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) transcript_id : NM_018743.3

name	Gins4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801928 GeneID:109145 MGI:1923847
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GINS complex subunit 4 (Sld5 homolog) transcript_id : NM_024240.4

name	Golga7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109809746 GeneID:57437 MGI:1931029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi autoantigen, golgin subfamily a, 7 transcript_id : NM_001042484.1

name	Golga7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109809742 GeneID:57437 MGI:1931029
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi autoantigen, golgin subfamily a, 7 transcript_id : NM_020585.2

name	Sfrp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:65301471 GeneID:20377 MGI:892014
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : secreted frizzled-related sequence protein 1 transcript_id : NM_013834.2

name	LOC100040931 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258525 GeneID:100040931
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : hypothetical protein LOC100040931 transcript_id : XM_001475506.1

name	Zmat4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130346 GeneID:320158 MGI:2443497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, matrin type 4 transcript_id : NM_177086.2

name	1810011O10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802249 GeneID:69068 MGI:1916318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810011O10 gene transcript_id : NM_026931.2

name	Indol1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122378 GeneID:209176 MGI:2142489
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : indoleamine-pyrrole 2,3 dioxygenase-like 1 transcript_id : NM_145949.1

name	Indo (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680346 GeneID:15930 MGI:96416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : indoleamine-pyrrole 2,3 dioxygenase transcript_id : NM_008324.1

name	Adam18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753683 GeneID:13524 MGI:105986
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 18 transcript_id : NM_010084.1

name	Adam3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:121949803 GeneID:11497 MGI:102518
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 3 (cyritestin) transcript_id : NM_009619.4

name	Adam5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677439 GeneID:11499 MGI:104730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 5 transcript_id : NM_007401.2

name	Polb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21729749 CCDS:CCDS22181.1 GeneID:18970 MGI:97740
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005874 - microtubule [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0005876 - spindle microtubule [Evidence ISS]; GO:0000795 - synaptonemal complex [Evidence TAS] GO_function : GO:0003890 - beta DNA polymerase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008017 - microtubule binding [Evidence ISS]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IMP]; GO:0006284 - base-excision repair [Evidence TAS]; GO:0006287 - base-excision repair, gap-filling [Evidence TAS] [Evidence IMP]; GO:0008219 - cell death [Evidence IMP]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 note : DNA polymerase beta; Pol beta product : polymerase (DNA directed), beta protein_id : NP_035260.1

name	Ikbkb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469101 CCDS:CCDS22182.1 GeneID:16150 MGI:1338071
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS]; GO:0004672 - protein kinase activity [Evidence IDA] [Evidence IMP]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004702 - receptor signaling protein serine/threonine kinase activity [Evidence TAS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS]; GO:0001782 - B cell homeostasis [Evidence IMP]; GO:0007252 - I-kappaB phosphorylation [Evidence TAS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta product : inhibitor of kappaB kinase beta protein_id : NP_034676.1

name	Plat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679375 CCDS:CCDS22183.1 GeneID:18791 MGI:97610
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA]; GO:0030141 - secretory granule [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008243 - plasminogen activator activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IDA] GO_process : GO:0048008 - platelet-derived growth factor receptor signaling pathway [Evidence IDA] [Evidence IMP]; GO:0006508 - proteolysis [Evidence IDA] codon_start : 1 exception : mismatches in translation product : plasminogen activator, tissue protein_id : NP_032898.1

name	Ap3m2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17505212 CCDS:CCDS22184.1 GeneID:64933 MGI:1929214
definition	GO_component : GO:0030662 - coated vesicle membrane [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : adaptor-related protein complex 3, mu 2 subunit protein_id : NP_083781.1

name	Myst3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487239 GeneID:244349 MGI:2442415
definition	GO_component : GO:0000786 - nucleosome [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] [Evidence IDA] GO_function : GO:0016407 - acetyltransferase activity [Evidence ISS]; GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004402 - histone acetyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0035162 - embryonic hemopoiesis [Evidence IMP]; GO:0016573 - histone acetylation [Evidence ISS]; GO:0030099 - myeloid cell differentiation [Evidence ISS]; GO:0016481 - negative regulation of transcription [Evidence ISS]; GO:0006334 - nucleosome assembly [Evidence IEA]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0035019 - somatic stem cell maintenance [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : zinc finger protein 220 product : MYST histone acetyltransferase (monocytic leukemia) 3 protein_id : NP_001074618.1

name	LOC100042253 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258562 GeneID:100042253
definition	codon_start : 1 product : similar to Lsm6 protein protein_id : XP_001477816.1

name	Ank1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13624297 CCDS:CCDS22187.1 GeneID:11733 MGI:88024
definition	GO_component : GO:0016323 - basolateral plasma membrane [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008093 - cytoskeletal adaptor activity [Evidence ISS]; GO:0019899 - enzyme binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IEA]; GO:0030507 - spectrin binding [Evidence ISS]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS] GO_process : GO:0045199 - maintenance of epithelial cell polarity [Evidence ISS]; GO:0015672 - monovalent inorganic cation transport [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : normoblastic anemia product : ankyrin 1, erythroid protein_id : NP_112435.1

name	Nkx6-3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51763993 GeneID:74561 MGI:1921811
definition	codon_start : 1 product : NK6 transcription factor related, locus 3 protein_id : XP_486090.1

name	Agpat6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520301 CCDS:CCDS22189.1 GeneID:102247 MGI:2142716
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence NAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003841 - 1-acylglycerol-3-phosphate O-acyltransferase activity [Evidence IEA]; GO:0008780 - acyl-[acyl-carrier protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence NAS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0046339 - diacylglycerol metabolism [Evidence IMP]; GO:0006631 - fatty acid metabolism [Evidence IMP]; GO:0002071 - glandular epithelial cell maturation [Evidence IMP]; GO:0007595 - lactation [Evidence IMP]; GO:0008610 - lipid biosynthesis [Evidence IMP]; GO:0030879 - mammary gland development [Evidence IMP]; GO:0040014 - regulation of body size [Evidence IMP]; GO:0019432 - triacylglycerol biosynthesis [Evidence IMP]; GO:0006641 - triacylglycerol metabolism [Evidence IMP] codon_start : 1 note : testis spermatogenesis apoptosis-related protein 7; putative lysophosphatidic acid acyltransferase product : lysophosphatidic acid acyltransferase zeta protein_id : NP_061213.2

name	Gins4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13195660 CCDS:CCDS22190.1 GeneID:109145 MGI:1923847
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : SLD5 protein_id : NP_077202.1

name	Golga7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109809747 GeneID:57437 MGI:1931029
definition	GO_component : GO:0000139 - Golgi membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006893 - Golgi to plasma membrane transport [Evidence ISS] codon_start : 1 product : golgi autoantigen, golgin subfamily a, 7 protein_id : NP_001035949.1

name	Golga7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109809743 GeneID:57437 MGI:1931029
definition	GO_component : GO:0000139 - Golgi membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006893 - Golgi to plasma membrane transport [Evidence ISS] codon_start : 1 product : golgi autoantigen, golgin subfamily a, 7 protein_id : NP_065610.2

name	Sfrp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65301472 CCDS:CCDS22191.1 GeneID:20377 MGI:892014
definition	GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IGI]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0001756 - somitogenesis [Evidence IGI]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : secreted frizzled-related sequence protein 1 protein_id : NP_038862.2

name	LOC100040931 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258526 GeneID:100040931
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475556.1

name	Zmat4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893005 CCDS:CCDS22192.1 GeneID:320158 MGI:2443497
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 product : zinc finger, matrin type 4 protein_id : NP_796060.1

name	1810011O10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312200 CCDS:CCDS22194.1 GeneID:69068 MGI:1916318
definition	codon_start : 1 product : thyroid cancer-1 protein_id : NP_081207.1

name	Indol1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122379 GeneID:209176 MGI:2142489
definition	GO_function : GO:0020037 - heme binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : indoleamine-pyrrole 2,3 dioxygenase-like 1 protein_id : NP_666061.1

name	Indo (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680347 GeneID:15930 MGI:96416
definition	GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0004426 - indoleamine-pyrrole 2,3-dioxygenase activity [Evidence IDA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA] GO_process : GO:0006952 - defense response [Evidence TAS]; GO:0006955 - immune response [Evidence IEA]; GO:0019441 - tryptophan catabolism to kynurenine [Evidence IDA] codon_start : 1 note : indole 2,3-dioxygenase product : indoleamine-pyrrole 2,3 dioxygenase protein_id : NP_032350.1

name	Adam18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753684 CCDS:CCDS22195.1 GeneID:13524 MGI:105986
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005178 - integrin binding [Evidence ISS]; GO:0004222 - metalloendopeptidase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : disintegrin 3 product : a disintegrin and metalloprotease domain 18 protein_id : NP_034214.1

name	Adam3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:121949804 CCDS:CCDS22196.1 GeneID:11497 MGI:102518
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0045121 - lipid raft [Evidence IDA] GO_process : GO:0007339 - binding of sperm to zona pellucida [Evidence IMP] [Evidence IDA] codon_start : 1 note : cyritestin product : a disintegrin and metalloprotease domain 3 (cyritestin) protein_id : NP_033749.2

name	Adam5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677440 GeneID:11499 MGI:104730
definition	GO_function : GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA] codon_start : 1 note : a disintegrin and metalloprotease domain (ADAM) 5 product : a disintegrin and metalloprotease domain 5 protein_id : NP_031427.2

clone name	MSMg01-136N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294J10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-526A14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-205E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051O01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-341I14.b	B6Ng01-341I14.g
ACC	GA124892	GA124893
length	1,112	1,007
definition	B6Ng01-341I14.b	B6Ng01-341I14.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(24,743,726 - 24,744,840)	(24,862,766 - 24,863,446)
sequence	gaattctttccaggaattctcatctgcatcgataagggacttgaggttgg ttctctgaatctggaactcaccacacttctatctacagctgttatcttcc aaacaagttctagccctttctggaacttgagcaagtcaagtgcagtggac gcgaaccatgttcatttctgtgtctgtggggtaggcactccctgtagctg gcaaatgtgtagaagctcacgtaggtggaccataagaatggaggcaaccc tctgccatggagcccgcattatacctcgtcagaggaggagatcagccttc tgatctgggacgggaccctcccctaaggagccattttcttttgcattaag aacggagggttttcagctcccagcacagtgagctagcctagggtgagcga caaagaagtcactgatctgagaagcgtctgatgcatgcacttgcacacca tctcagtgtcctgcaatttgggggactccaatagtaggtacagaatagag gggcaaaaagctgagtctcaggtatgtcacgtgtcttcaaaaaacaaggt agggttgattcctggtagccagcaccaggagaacgcagcctcatcaagct ctccttcctccactgactgcgcgccccacggacaccacggttagagctct ctgctgagtttgacaactcagaagcgcagtcagatacccttgcccttctt tcagcctccactcagcggtattgtgtgattctcacctcgcgttctcagtc tcctggatggttgtgctccgcccgcagaggagcggagcgccctccccctc caccatctcgggcaaaaccttcatcgttccccacaagaacatcccccaaa ctgcctcctcttggtttcctttctccatacttcttgctggaaggtgcgct ccctcctctgagacccctaattagctttcctgcgtctcttattcaacatc ctgatttgccttgtatttatgtgtaagagagctggaaggtgggggcatga cctgtatagtgcatccacacaaaccagtcatggttcctaggtgcatagtg agcttcaagttatttgctggaaacacatctctctctcctctctctctcct ctctctctctct	gaattcatctgctctctacaaccacataatggacatccatatcacaacaa aaataaaggtagaatatttttcatttgtaatatacattatatatgtaata tgtattggccattcatcacacacacacacatatgcataaaatatttcaaa gaaaactgggtgcatctggggaactaagaagaatagaggggagaattttt attctacactattttatatttactgatttttgaattatgtaaattcagtg tttcaaaaaatgaataaaacattagtataaaaggaatgctttctattcac aactcatcaattttctcaaaatacccaagtcgtattaaaaatacttgatt ataatataaaaggaaaaagaactgagtgatatagacacaaatcaagatac agggaaagagaatggtagtgtctacatcaccagcaaacacagtaaatatg cttccagcaaggattcgcgtccagtttctgcctgcggcaacacatatggt gtcaaagcaaatgagaaacaccccctttcgctgcacagacagaccacaag catttgtcttaggcagggctggtatcactgcgataaaataccaggaccaa aaatgacttgggaaggaaagggtttatttagttacacttccacattgttg ttgatcactgaaggaagaagtcaagacaggacagaaccttggagacagga gctgacacagaggacaacagaggatgcggaagcatgctgttcgctggctt gctccccctggtttgctctgcctgctgtttttacagaattcagagcacct acccagaggtagacccacccacaaagagctgggcccacctccattaatga ctgataaggaaaatgctctatagccttgcctacagcctcccagatgatgc tagcttgcctccagttgacaataaactaaccagaacagcattcttggtcc tgtgtctaacccagtgactctgctgatcctgcatctattcaccttcccac ctgtcaa
quality values	Open. 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Hide. 62 59 51 49 62 59 43 62 62 62 42 54 38 43 56 48 46 49 51 49 62 62 59 59 59 59 62 62 62 62 62 54 59 62 62 62 62 59 59 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 54 62 62 62 62 49 54 59 62 62 62 62 59 59 59 62 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 58 58 58 58 58 58 58 58 58 54 54 54 54 58 54 58 58 58 58 58 58 48 58 58 58 58 54 54 46 58 58 54 58 58 58 46 54 58 54 58 58 54 58 54 54 58 58 58 54 54 58 54 54 47 54 50 58 58 58 58 54 58 58 58 50 51 51 53 53 58 58 58 58 54 49 50 49 58 58 42 58 51 58 51 49 53 58 42 37 58 39 58 58 58 41 45 58 58 50 41 58 58 58 48 46 49 37 41 50 58 46 48 58 41 29 58 49 53 39 58 53 47 47 52 53 46 53 39 53 58 51 51 53 36 53 31 58 41 58 39 58 54 53 51 50 49 39 39 50 41 51 54 51 41 32 46 40 49 40 58 53 34 45 53 52 54 52 51 32 41 58 54 49 37 53 52 54 20 23 44 47 51 40 29 53 26 38 29 35 41 51 51 27 39 49 45 39 21 25 50 42 35 51 26 49 38 28 30 35 44 39 33 54 18 44 27 21 52 37 51 36 34 51 32 45 29 45 52 32 52 41 21 33 40 34 37 39 37 47 32 53 25 51 36 43 40 49 49 52 53 31 41 39 31 53 32 53 26 36 53 32 42 23 46 27 45 33 34 32 23 53 53 53 42 23 32 18 40 45 33 30 33 34 6 10 13 12 42 21 30 42 39 29 30 51 31 21 29 45 29 38 31 39 33 28 29 51 44 26 35 39 31 21 32 16 31 32 25 31 31 31 31 31 47 27 17 48 42 26 31 36 37 20 42 15 29 33 12 26 31 43 33 30 28 32 31 24 31 20 11 29 27 47 46 27 18 37 22 32 36 34 35 37 29 21 22 23 12 36 32 22 25 21 31 35 32 25 37 35 33 33 46 21 29 27 29 12 26 38 19 14 22 32 35 27 32 27 24 32 19 30 31 20 26 22 30 16 34 22 32 14 6 13 13 31 48 33 31 11 8 35 17 18 5 9 15 13 31 31 27 32 9 5 10 15 25 31 21 25 10 21 21 31 33 22 29 19 21 28 26 21 19 39 32 15 9 15 30 10 14 31 21 19 29 21 23 31 34 27 17 15 17 12 30 8 31 28 28 32 22 33 27 10 14 29 13 18 23 47 20 4 3 11 20 21 7 21 14 34

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_24743726_24744840
seq2: B6Ng01-341I14.b_42_1153

seq1  GAATTCTTTCCAGGAATTCTCATCTGCATCGATAAGGGACTTGAGGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCAGGAATTCTCATCTGCATCGATAAGGGACTTGAGGTTGG  50

seq1  TTCTCTGAATCTGGAACTCACCACACTTCTATCTACAGCTGTTATCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGAATCTGGAACTCACCACACTTCTATCTACAGCTGTTATCTTCC  100

seq1  AAACAAGTTCTAGCCCTTTCTGGAACTTGAGCAAGTCAAGTGCAGTGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTTCTAGCCCTTTCTGGAACTTGAGCAAGTCAAGTGCAGTGGAC  150

seq1  GCGAACCATGTTCATTTCTGTGTCTGTGGGGTAGGCACTCCCTGTAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAACCATGTTCATTTCTGTGTCTGTGGGGTAGGCACTCCCTGTAGCTG  200

seq1  GCAAATGTGTAGAAGCTCACGTAGGTGGACCATAAGAATGGAGGCAACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTGTAGAAGCTCACGTAGGTGGACCATAAGAATGGAGGCAACCC  250

seq1  TCTGCCATGGAGCCCGCATTATACCTCGTCAGAGGAGGAGATCAGCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCATGGAGCCCGCATTATACCTCGTCAGAGGAGGAGATCAGCCTTC  300

seq1  TGATCTGGGACGGGACCCTCCCCTAAGGAGCCATTTTCTTTTGCATTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGGGACGGGACCCTCCCCTAAGGAGCCATTTTCTTTTGCATTAAG  350

seq1  AACGGAGGGTTTTCAGCTCCCAGCACAGTGAGCTAGCCTAGGGTGAGCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGAGGGTTTTCAGCTCCCAGCACAGTGAGCTAGCCTAGGGTGAGCGA  400

seq1  CAAAGAAGTCACTGATCTGAGAAGCGTCTGATGCATGCACTTGCACACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGTCACTGATCTGAGAAGCGTCTGATGCATGCACTTGCACACCA  450

seq1  TCTCAGTGTCCTGCAATTTGGGGGACTCCAATAGTAGGTACAGAATAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGTCCTGCAATTTGGGGGACTCCAATAGTAGGTACAGAATAGAG  500

seq1  GGGCAAAAAGCTGAGTCTCAGGTATGTCACGTGTCTTCAAAAAACAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAAAAGCTGAGTCTCAGGTATGTCACGTGTCTTCAAAAAACAAGGT  550

seq1  AGGGTTGATTCCTGGTAGCCAGCACCAGGAGAACGCAGCCTCATCAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGATTCCTGGTAGCCAGCACCAGGAGAACGCAGCCTCATCAAGCT  600

seq1  CTCCTTCCTCCACTGACTGCGCGCCCCACGGACACCACGGTTAGAGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCTCCACTGACTGCGCGCCCCACGGACACCACGGTTAGAGCTCT  650

seq1  CTGCTGAGTTTGACAACTCAGAAGCGCAGTCAGATACCCTTGCCCTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAGTTTGACAACTCAGAAGCGCAGTCAGATACCCTTGCCCTTCTT  700

seq1  TCAGCCTCCACTCAGCGGTATTGTGTGATTCTCACCTCGCGTTCTCAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCCACTCAGCGGTATTGTGTGATTCTCACCTCGCGTTCTCAGTC  750

seq1  TCCTGGATGGTTGTGCTCCGCCCGCAGAGGAGCGGAGCGCCCTCCCCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATGGTTGTGCTCCGCCCGCAGAGGAGCGGAGCGCCCTCCCCCTC  800

seq1  CACCATCTCGGGCAAAACCTTCATCGTTCCCCACAAGAACATCCCCCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCTCGGGCAAAACCTTCATCGTTCCCCACAAGAACATCCCCCAAA  850

seq1  CTGCCTCCTCTTGGTTTCCTTTCTCCATACTTCTTGCTGGAAGGTGCGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCTCTTGGTTTCCTTTCTCCATACTTCTTGCTGGAAGGTGCGCT  900

seq1  CCCTCCTCTGAGACCCCTAATTAGCTTTCCTGCGTCTCTTATTCAACATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTCTGAGACCCCTAATTAGCTTTCCTGCGTCTCTTATTCAACATC  950

seq1  CTGATTTGCCTTGTATTTATGTGTAAGAGAGCTGG-AGGTGGGGGCATGG  999
      ||||||||||||||||||||||||||||||||||| |||||||||||| |
seq2  CTGATTTGCCTTGTATTTATGTGTAAGAGAGCTGGAAGGTGGGGGCAT-G  999

seq1  CCCTGTATAAGTGCATCCACCACAAACCAGTCATGGTTCCTA-GTGCATA  1048
       ||||||| |||||||||| |||||||||||||||||||||| |||||||
seq2  ACCTGTAT-AGTGCATCCA-CACAAACCAGTCATGGTTCCTAGGTGCATA  1047

seq1  GTGAAGCTTCAAGGTATTTGCTGAACACAC-TCTCTCTCTCTCTCTCTCT  1097
      ||| ||||||||| ||||||||| | |||| |||||||||| ||||||||
seq2  GTG-AGCTTCAAGTTATTTGCTGGAAACACATCTCTCTCTC-CTCTCTCT  1095

seq1  CTCTCTCTCTCTCTCTCT  1115
      ||| ||||||||||||||
seq2  CTC-CTCTCTCTCTCTCT  1112

seq1: chr8_24862766_24863446
seq2: B6Ng01-341I14.g_68_748 (reverse)

seq1  TCCTGTCTTGACTTCTTCCTTCAGTGATCAACAACAATGTGGAAGTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTTGACTTCTTCCTTCAGTGATCAACAACAATGTGGAAGTGTAA  50

seq1  CTAAATAAACCCTTTCCTTCCCAAGTCATTTTTGGTCCTGGTATTTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAACCCTTTCCTTCCCAAGTCATTTTTGGTCCTGGTATTTTATC  100

seq1  GCAGTGATACCAGCCCTGCCTAAGACAAATGCTTGTGGTCTGTCTGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGATACCAGCCCTGCCTAAGACAAATGCTTGTGGTCTGTCTGTGCA  150

seq1  GCGAAAGGGGGTGTTTCTCATTTGCTTTGACACCATATGTGTTGCCGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAAGGGGGTGTTTCTCATTTGCTTTGACACCATATGTGTTGCCGCAG  200

seq1  GCAGAAACTGGACGCGAATCCTTGCTGGAAGCATATTTACTGTGTTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACTGGACGCGAATCCTTGCTGGAAGCATATTTACTGTGTTTGCT  250

seq1  GGTGATGTAGACACTACCATTCTCTTTCCCTGTATCTTGATTTGTGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATGTAGACACTACCATTCTCTTTCCCTGTATCTTGATTTGTGTCTA  300

seq1  TATCACTCAGTTCTTTTTCCTTTTATATTATAATCAAGTATTTTTAATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTCAGTTCTTTTTCCTTTTATATTATAATCAAGTATTTTTAATAC  350

seq1  GACTTGGGTATTTTGAGAAAATTGATGAGTTGTGAATAGAAAGCATTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGGTATTTTGAGAAAATTGATGAGTTGTGAATAGAAAGCATTCCT  400

seq1  TTTATACTAATGTTTTATTCATTTTTTGAAACACTGAATTTACATAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTAATGTTTTATTCATTTTTTGAAACACTGAATTTACATAATTC  450

seq1  AAAAATCAGTAAATATAAAATAGTGTAGAATAAAAATTCTCCCCTCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAGTAAATATAAAATAGTGTAGAATAAAAATTCTCCCCTCTATT  500

seq1  CTTCTTAGTTCCCCAGATGCACCCAGTTTTCTTTGAAATATTTTATGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAGTTCCCCAGATGCACCCAGTTTTCTTTGAAATATTTTATGCAT  550

seq1  ATGTGTGTGTGTGTGATGAATGGCCAATACATATTACATATATAATGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGTGTGTGATGAATGGCCAATACATATTACATATATAATGTAT  600

seq1  ATTACAAATGAAAAATATTCTACCTTTATTTTTGTTGTGATATGGATGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAATGAAAAATATTCTACCTTTATTTTTGTTGTGATATGGATGTC  650

seq1  CATTATGTGGTTGTAGAGAGCAGATGAATTC  681
      |||||||||||||||||||||||||||||||
seq2  CATTATGTGGTTGTAGAGAGCAGATGAATTC  681

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information