BAC Information

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BAC

Clone NameB6Ng01-341N24
Chromosome8 (Build37)
Map Location 131,133,052 - 131,134,110
singlet/doubletsinglet
Overlap geneLOC668494
Upstream genePard3, Nrp1
Downstream geneItgb1, LOC100042659, LOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341N24.bB6Ng01-341N24.g
ACCGA125134GA125135
length1,064773
definitionB6Ng01-341N24.b B6Ng01-341N24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctagccctgaagcacacaggggcttaactttcaaaatcaacagt
gttgcccaacccatctccaaacccacatcaatgtactattgccccttaac
atagtatgaataattccttctgattcagggtgctgagagaaaggcaggca
cagttcctctaattagttaacctgggtcatgtcagtgaaggtagagactt
gtattatttcagaattgtattgctttatacagaaataccccgtgactgcc
cactctctgcactctatgaatcatcttgggaataagtgatttaaagtcct
cctggattgtgcccaggagggtctatcaatatggctggctatcaattgct
gctctatatcaatgctaatggaaggaaatgcgatatgaaatactggtctg
ggggaaaataaaagagcggtctccattgattaaatttacctgaaagcttg
acatattttgttgaccaaaggtcgtatttctgaatgagacacgtgccttt
aagaagctgccagtaaaatggggcacattttagacaacattgaaaatatt
tgtctcctcagttaacatctgtggtgccaggtgtggggcacctcaaaaac
tccagacctctccagtcagtactgtgggcctccatggttcctacctactt
aagacccagcccagtgtgcttagatcccagaacacagacagtatgaaagt
aaagtaggccaatacctacttcttcttgtaagggatcctttccaatatgc
ctgctgatgctgtcagtagcaacaagctctgcaactctgaacagccagga
aaacaaagaaataaaggaaacaaaggccaggttctctctaaggacccagg
tggaagtctctctcttccctttctggctttgaaagccaaagttattctct
gacacttgtcttatttttcttcacacataagaattgtttccagtccacat
ttctagtcttgctctatttcagatcttctgttggatggcatgtatttcat
acacatcacctggatacacctcatcttctggacccttaagtgcataacga
ttcatagacttgct

gaattctttgtttagctctgtgccccatttttaatagggttatttgagtc
tctggagtccaacttcttgtgttctttgaatatattggatattacaactc
tgttggatgtaggattggtaacaatctttcttaatgtgttgactgttgtt
ttgttctattgacagtgtcctttgccttacagaagctttgtaattttatg
aggtcccatttgtcaattcttgatcttaaaacataagccattggtattct
cttcaggaaattctcccctgtgcctatgtgtttggggttctttaccactt
tctcttctgttagtttcagtgtatctggtattatgtagaggtgcatgagc
aacttggacttgagctttgtacaaggagttaagaatggattgatttgcat
tcttctccatgctaaccaccagttgaaccagcaccatttgttgaaaatgt
tgtcttttttacactgaacgcttttagttcctttgtcaaaaatcccatga
ccataggtgtatgggttcaattctattctattgatctacctgcctgtctc
tataccaatactatgcagggtttgtttttttttttatcactattgctctg
taatatagcttgaggtcagggatggtgattcccacagaagtttcttgtta
acaatagttttcactatcctgggttttttggttatttccaaatgaatttt
tcatattgctatttcttactctatgaagaattgagttggaatttttgatg
gggactgcaactgaattctgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_131133052_131134110
seq2: B6Ng01-341N24.b_45_1108

seq1  GAATTCCTAGCCCTGAAGCACACAGGGGCTTAACTTTCAAAATCAACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCCCTGAAGCACACAGGGGCTTAACTTTCAAAATCAACAGT  50

seq1  GTTGCCCAACCCATCTCCAAACCCACATCAATGTACTATTGCCCCTTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCCAACCCATCTCCAAACCCACATCAATGTACTATTGCCCCTTAAC  100

seq1  ATAGTATGAATAATTCCTTCTGATTCAGGGTGCTGAGAGAAAGGCAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATGAATAATTCCTTCTGATTCAGGGTGCTGAGAGAAAGGCAGGCA  150

seq1  CAGTTCCTCTAATTAGTTAACCTGGGTCATGTCAGTGAAGGTAGAGACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCTCTAATTAGTTAACCTGGGTCATGTCAGTGAAGGTAGAGACTT  200

seq1  GTATTATTTCAGAATTGTATTGCTTTATACAGAAATACCCCGTGACTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATTTCAGAATTGTATTGCTTTATACAGAAATACCCCGTGACTGCC  250

seq1  CACTCTCTGCACTCTATGAATCATCTTGGGAATAAGTGATTTAAAGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCTGCACTCTATGAATCATCTTGGGAATAAGTGATTTAAAGTCCT  300

seq1  CCTGGATTGTGCCCAGGAGGGTCTATCAATATGGCTGGCTATCAATTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATTGTGCCCAGGAGGGTCTATCAATATGGCTGGCTATCAATTGCT  350

seq1  GCTCTATATCAATGCTAATGGAAGGAAATGCGATATGAAATACTGGTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTATATCAATGCTAATGGAAGGAAATGCGATATGAAATACTGGTCTG  400

seq1  GGGGAAAATAAAAGAGCGGTCTCCATTGATTAAATTTACCTGAAAGCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAATAAAAGAGCGGTCTCCATTGATTAAATTTACCTGAAAGCTTG  450

seq1  ACATATTTTGTTGACCAAAGGTCGTATTTCTGAATGAGACACGTGCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTTGTTGACCAAAGGTCGTATTTCTGAATGAGACACGTGCCTTT  500

seq1  AAGAAGCTGCCAGTAAAATGGGGCACATTTTAGACAACATTGAAAATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTGCCAGTAAAATGGGGCACATTTTAGACAACATTGAAAATATT  550

seq1  TGTCTCCTCAGTTAACATCTGTGGTGCCAGGTGTGGGGCACCTCAAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTCAGTTAACATCTGTGGTGCCAGGTGTGGGGCACCTCAAAAAC  600

seq1  TCCAGACCTCTCCAGTCAGTACTGTGGGCCTCCATGTTTCCTACCTACTT  650
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCCAGACCTCTCCAGTCAGTACTGTGGGCCTCCATGGTTCCTACCTACTT  650

seq1  AAGACCCAGCCCAGTGTGCTTAGATCCCAGAACACAGACAGTATGAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCAGCCCAGTGTGCTTAGATCCCAGAACACAGACAGTATGAAAGT  700

seq1  AAAGTAGGCCAATACCTACTTCTTCTTGTAAGGGATCCTTTCCAATATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGGCCAATACCTACTTCTTCTTGTAAGGGATCCTTTCCAATATGC  750

seq1  CTGCTGATGCTGTCAGTAGCAACAAGCTCTGCAACTCTGAACAGCCAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGATGCTGTCAGTAGCAACAAGCTCTGCAACTCTGAACAGCCAGGA  800

seq1  AAACAAAGAAATAAAGGAAACAAAGGCCAGGTTCTCTCTAAGGACCCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGAAATAAAGGAAACAAAGGCCAGGTTCTCTCTAAGGACCCAGG  850

seq1  TGGAAAGTCTCTCTCTTCCCTTTCTGGCTTTGAAAGCCAAAAGTA-TCTC  899
      ||| |||||||||||||||||||||||||||||||||||||  || ||||
seq2  TGG-AAGTCTCTCTCTTCCCTTTCTGGCTTTGAAAGCCAAAGTTATTCTC  899

seq1  TGACACTTGTC-TATTTTTCTTCACACAT-AGAA-TGTTTCCAGTCCACA  946
      ||||||||||| ||||||||||||||||| |||| |||||||||||||||
seq2  TGACACTTGTCTTATTTTTCTTCACACATAAGAATTGTTTCCAGTCCACA  949

seq1  -TTCTAGTCTTGCTCTATTCAGGATC-TCTGTT-GATGGCATGGAATTCA  993
       ||||||||||||||||||   |||| |||||| ||||||||| | ||||
seq2  TTTCTAGTCTTGCTCTATTTCAGATCTTCTGTTGGATGGCATGTATTTCA  999

seq1  TACACATCACCTGAATAACACCTCATC-TCTGGACCCCTAAAGTGCATAA  1042
      ||||||||||||| || |||||||||| |||||| |||| |||||||| |
seq2  TACACATCACCTGGAT-ACACCTCATCTTCTGGA-CCCTTAAGTGCAT-A  1046

seq1  AGGATTCATAGA-TTGCT  1059
      | |||||||||| |||||
seq2  ACGATTCATAGACTTGCT  1064


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