BAC Information

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BAC

Clone NameB6Ng01-341O21
Chromosome8 (Build37)
Map Location 68,932,762 - 68,933,869
singlet/doubletsinglet
Overlap geneMarch1
Upstream geneLOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-341O21.bB6Ng01-341O21.g
ACCGA125172GA125173
length1,1811,109
definitionB6Ng01-341O21.b B6Ng01-341O21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaactgtcaaatccaacagaaagaaacctaaaaagcctaaatata
tggaaggttctgacagtgcctggatcactgtgatgcatgctctctaaatc
gattcatagatcagtgtagtccttactaagacttcatcatgtttatattt
cggtgagtaaacttattctcaaaatttcatgaaatgataaaggatctaaa
aaggcaaaaataaacctgacatatgagaaagtacagaccttttacactgt
cacactctgaagctcacaatgacactagtgtacggtagaaaggaagaatt
aggtgtttgatctttggaagggaaagcattattcaagatataaattcaca
catatactgctaattggttacagcacatgttacactcattcttcaaacaa
agaaaaaacccttttatcaaatgtcacttcattatagctgggtctccatt
aacagcattaaagataagcccaaaatatacctggtgtcacattaagaaaa
gaaaacccttcaccttgaatttatatgaccaagagcaagaccatgtttga
atttttcacttctgactctatgtcttcaatctgctagtagttgtggtttc
tggtttgtttgtagtctgtctgttgtatgtttaccctgatgtctgactgt
ccttacacatgtatgtatgactctaacataggaccttgctctgtatttat
tgttcagcacagaaaacatgatatgggaacgaatgggatactttacaata
atctttaaacagagtttttacaaaaggattaagttactaactccaacgaa
ccccaactgaccttgatagccaacaggactgcaaatattaccattatcaa
actacatctacatcactttcagcatttaaagcagacagttgtggtataaa
gttacttccaatctattggctactttcagcaatgattaccataacacata
tacacattcattactcttaagacagagcatggaaaatttcatgtttagat
aaagctatacattagcttattgctgtgaagtgatgacaaaagaaaaatct
taggaataaagttgcttgttacaatgttcctccttaaggcaggaataaac
aaaaactagctagtgcacagcagaattctgacttaatcttcttctagttg
gaattattatctctaatcttcacatgactat

gaattctatatgctctatcatttcacagtgtccagactctcaacattttc
agcatgtctttataagtgtcactactccaattgctataatcattgtgtgt
gccttctgattccaggttccccagctttaagtgttgcaaaaagagcagga
tgccataagctaaaaagaaggactttccaaggaggagaactggtcaacaa
tgcagaatatatcagggagaagggctgtgggggatttggggagggaaata
gaaagtggccgtgcatccttaagcttaactaaaagaggactatgagtatc
ttagaagaaatgcaatcccaatagcaatttaaactgagctgttcctgcct
tctgacattacaactcattgagataaaacatgactcagtggagacatgga
aaactgcattaccttgatttaaaaaaaaaaatcaaacaaaaaaaatgcag
aacctgcatcatagcacctagaaacaatttctgctgcctttactgattgt
atgtcagcagtagcagttcctttgtggatctgtctatacttttacaacat
tttctcagctatcacgaggctcctaacagccaagtaagattttacaaacg
aggaagccaattctgaaaagctgttcttaagcgtccactagaaccaacac
taacgaacatgcacattgcccctgttttcgtcaagccaggactttgtcag
gactggctgagagatgcatatacatgatcttctaggccacccgtatgaag
tcagacttcacagccttgtctgtatgaggctgcattctaagtaaatacct
gctaagtgcactcagaaatggagtttttgccagtaatgctgaattataag
ccaaatgcatacaagtaacagttataacccaagagtccatagcctagcca
tataaaattagcagttgaaaattatgtaaaaattcaaatatgccttaaat
aataagatagggagagaattatggtacctcccatgtggcaagtggtcagc
ccttcctcgtttacctttcccatgaactcctaaagactgttttaacttat
ttttaaatgagcaagctggacactttcctaacttactgaactaatggtag
ggcatcggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68932762_68933869
seq2: B6Ng01-341O21.g_71_1179

seq1  GAATTCTATATGCTCTATCATTTCACAGTGTCCAGACTCTCAACATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATGCTCTATCATTTCACAGTGTCCAGACTCTCAACATTTTC  50

seq1  AGCATGTCTTTATAAGTGTCACTACTCCAATTGCTATAATCATTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTCTTTATAAGTGTCACTACTCCAATTGCTATAATCATTGTGTGT  100

seq1  GCCTTCTGATTCCAGGTTCCCCAGCTTTAAGTGTTGCAAAAAGAGCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTGATTCCAGGTTCCCCAGCTTTAAGTGTTGCAAAAAGAGCAGGA  150

seq1  TGCCATAAGCTAAAAAGAAGGACTTTCCAAGGAGGAGAACTGGTCAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATAAGCTAAAAAGAAGGACTTTCCAAGGAGGAGAACTGGTCAACAA  200

seq1  TGCAGAATATATCAGGGAGAAGGGCTGTGGGGGATTTGGGGAGGGAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATATATCAGGGAGAAGGGCTGTGGGGGATTTGGGGAGGGAAATA  250

seq1  GAAAGTGGCCGTGCATCCTTAAGCTTAACTAAAAGAGGACTATGAGTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGGCCGTGCATCCTTAAGCTTAACTAAAAGAGGACTATGAGTATC  300

seq1  TTAGAAGAAATGCAATCCCAATAGCAATTTAAACTGAGCTGTTCCTGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGAAATGCAATCCCAATAGCAATTTAAACTGAGCTGTTCCTGCCT  350

seq1  TCTGACATTACAACTCATTGAGATAAAACATGACTCAGTGGAGACATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACATTACAACTCATTGAGATAAAACATGACTCAGTGGAGACATGGA  400

seq1  AAACTGCATTACCTTGATTTAAAAAAAAAAATCAAACAAAAAAAATGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCATTACCTTGATTTAAAAAAAAAAATCAAACAAAAAAAATGCAG  450

seq1  AACCTGCATCATAGCACCTAGAAACAATTTCTGCTGCCTTTACTGATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCATCATAGCACCTAGAAACAATTTCTGCTGCCTTTACTGATTGT  500

seq1  ATGTCAGCAGTAGCAGTTCCTTTGTGGATCTGTCTATACTTTTACAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGCAGTAGCAGTTCCTTTGTGGATCTGTCTATACTTTTACAACAT  550

seq1  TTTCTCAGCTATCACGAGGCTCCTAACAGCCAAGTAAGATTTTACAAACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGCTATCACGAGGCTCCTAACAGCCAAGTAAGATTTTACAAACG  600

seq1  AGGAAGCCAATTCTGAAAAGCTGTTCTTAAGCGTCCACTAGAACCAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCCAATTCTGAAAAGCTGTTCTTAAGCGTCCACTAGAACCAACAC  650

seq1  TAACGAACATGCACATTGCCCCTGTTTTCGTCAAGCCAGGACTTTGTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGAACATGCACATTGCCCCTGTTTTCGTCAAGCCAGGACTTTGTCAG  700

seq1  GACTGGCTGAGAGATGCATATACATGATCTTCTAGGCCACCCGTATGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGCTGAGAGATGCATATACATGATCTTCTAGGCCACCCGTATGAAG  750

seq1  TCAGACTTCACAGCCTTGTCTGTATGAGGCTGCATTCTAAGTAAATACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTTCACAGCCTTGTCTGTATGAGGCTGCATTCTAAGTAAATACCT  800

seq1  GCTAAGTGCACTCAGAAATGGAG-TTTTGGCAGTAATGCTGAA-TATAAG  848
      ||||||||||||||||||||||| ||||| ||||||||||||| ||||||
seq2  GCTAAGTGCACTCAGAAATGGAGTTTTTGCCAGTAATGCTGAATTATAAG  850

seq1  CCAAATGCATACAAGTAACAGTAATAACCCAAGAGTCCCATAGCCTAGCA  898
      |||||||||||||||||||||| ||||||||||||| |||||||||||| 
seq2  CCAAATGCATACAAGTAACAGTTATAACCCAAGAGT-CCATAGCCTAGCC  899

seq1  TAATAAAATTAGCAGTTGAAAATTATGTAAAAATTCAAATATGCCTTAAA  948
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAATTAGCAGTTGAAAATTATGTAAAAATTCAAATATGCCTTAAA  949

seq1  TAAATAAGATAGGGAGAGAATTAT-GTACCTCCCATGTGCCAAGT-GTCA  996
      | |||||||||||||||||||||| |||||||||||||| ||||| ||||
seq2  T-AATAAGATAGGGAGAGAATTATGGTACCTCCCATGTGGCAAGTGGTCA  998

seq1  GCCTTTCCTCGTTTAC--TTTCCATG-ACTCCTTAAGCATTGTTTTTAAC  1043
      ||| ||||||||||||  || ||||| |||||| ||| | || |||||||
seq2  GCCCTTCCTCGTTTACCTTTCCCATGAACTCCTAAAG-ACTG-TTTTAAC  1046

seq1  TTATTTTTAAATGAGCAAGCT-GACACTTTTCCTAATTTACTGACACAAT  1092
      ||||||||||||||||||||| ||||| |||||||| |||||||   |||
seq2  TTATTTTTAAATGAGCAAGCTGGACAC-TTTCCTAACTTACTGAACTAAT  1095

seq1  GGGTAAGGGCATCGGG  1108
      ||   |||||||||||
seq2  GG--TAGGGCATCGGG  1109


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