MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-342H20
Chromosome	8 (Build37)
Map Location	114,886,746 - 114,971,743
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Fa2h, Wdr59, Znrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498, LOC100042040
Downstream gene	Cntnap4, LOC100042061
Link	Open Mouse BAC browser

Click to get alignment info.

name	Fa2h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:338521 MGI:2443327
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wdr59 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319481 MGI:2442115
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Znrf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170737 MGI:2177308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ldhd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52815 MGI:106428
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22640 MGI:99154
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ctrb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66473 MGI:88559
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bcar1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12927 MGI:108091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cfdp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23837 MGI:1344403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem170 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66817 MGI:106426
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chst5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56773 MGI:1931825
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4932417I16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234740 MGI:2685024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gabarapl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93739 MGI:1890602
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30947 MGI:1353631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kars (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:85305 MGI:1934754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Terf2ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57321 MGI:1929871
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627828 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627828 MGI:3643578
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 106 ESTs, 42 Proteins

name	LOC672498 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	LOC100042040 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042040
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs, 4 Proteins pseudo : _no_value

name	Cntnap4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170571 MGI:2183572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042061 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042061
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins

name	Fa2h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342560 GeneID:338521 MGI:2443327
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fatty acid 2-hydroxylase transcript_id : NM_178086.2

name	Wdr59 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372339 GeneID:319481 MGI:2442115
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 59 transcript_id : NM_176923.3

name	Znrf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56711336 GeneID:170737 MGI:2177308
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc and ring finger 1 transcript_id : NM_133206.2

name	Ldhd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328378 GeneID:52815 MGI:106428
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactate dehydrogenase D transcript_id : NM_027570.3

name	Zfp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83404684 GeneID:22640 MGI:99154
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 1 transcript_id : NM_011742.2

name	Zfp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109659837 GeneID:22640 MGI:99154
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 1 transcript_id : NM_001037665.2

name	Ctrb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385031 GeneID:66473 MGI:88559
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chymotrypsinogen B1 transcript_id : NM_025583.1

name	Bcar1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254592 GeneID:12927 MGI:108091
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : breast cancer anti-estrogen resistance 1 transcript_id : NM_009954.2

name	Cfdp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753411 GeneID:23837 MGI:1344403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : craniofacial development protein 1 transcript_id : NM_011801.1

name	Tmem170 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383256 GeneID:66817 MGI:106426
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 170 transcript_id : NM_025781.2

name	Chst5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110815848 GeneID:56773 MGI:1931825
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 transcript_id : NM_019950.2

name	4932417I16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677479 GeneID:234740 MGI:2685024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932417I16 gene transcript_id : NM_001033321.1

name	Gabarapl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354357 GeneID:93739 MGI:1890602
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2 transcript_id : NM_026693.3

name	Adat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802291 GeneID:30947 MGI:1353631
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenosine deaminase, tRNA-specific 1 transcript_id : NM_013925.3

name	Kars (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716380 GeneID:85305 MGI:1934754
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lysyl-tRNA synthetase transcript_id : NM_053092.1

name	Terf2ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15618998 GeneID:57321 MGI:1929871
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : telomeric repeat binding factor 2, interacting protein transcript_id : NM_020584.1

name	EG627828 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259096 GeneID:627828 MGI:3643578
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 95 ESTs, 19 Proteins product : predicted gene, EG627828, transcript variant 1 transcript_id : XM_895041.3

name	EG627828 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259095 GeneID:627828 MGI:3643578
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 106 ESTs, 41 Proteins product : predicted gene, EG627828, transcript variant 5 transcript_id : XM_902467.3

name	LOC672498 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259099 GeneID:672498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical LOC672498, transcript variant 2 transcript_id : XM_001479965.1

name	LOC672498 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259097 GeneID:672498
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical LOC672498, transcript variant 1 transcript_id : XM_001479960.1

name	Cntnap4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982590 GeneID:170571 MGI:2183572
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin associated protein-like 4 transcript_id : NM_130457.2

name	LOC100042061 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259044 GeneID:100042061
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins product : similar to GDP-mannose 4, 6-dehydratase transcript_id : XM_001477490.1

name	Fa2h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017399 CCDS:CCDS22674.1 GeneID:338521 MGI:2443327
definition	codon_start : 1 exception : mismatches in translation note : fatty acid hydroxylase domain containing 1 product : fatty acid 2-hydroxylase protein_id : NP_835187.1

name	Wdr59 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892721 CCDS:CCDS22675.1 GeneID:319481 MGI:2442115
definition	codon_start : 1 exception : mismatches in translation product : WD repeat domain 59 protein_id : NP_795897.1

name	Znrf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875354 CCDS:CCDS22676.1 GeneID:170737 MGI:2177308
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : peripheral nerve injury protein nin283; ring finger protein 42 product : zinc ring finger protein 1 protein_id : NP_573469.1

name	Ldhd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328379 CCDS:CCDS22677.1 GeneID:52815 MGI:106428
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004458 - D-lactate dehydrogenase (cytochrome) activity [Evidence IEA]; GO:0008720 - D-lactate dehydrogenase activity [Evidence NAS]; GO:0005515 - protein binding [Evidence IPI] [Evidence IDA] GO_process : GO:0006754 - ATP biosynthesis [Evidence NAS]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : D-lactate dehydrogenase protein_id : NP_081846.3

name	Zfp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83404683 CCDS:CCDS22678.1 GeneID:22640 MGI:99154
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : zinc finger protein 1 isoform 1 protein_id : NP_001032754.1

name	Zfp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83404685 GeneID:22640 MGI:99154
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : zinc finger protein 1 isoform 2 protein_id : NP_035872.2

name	Ctrb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385032 CCDS:CCDS22679.1 GeneID:66473 MGI:88559
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : chymotrypsinogen B1 protein_id : NP_079859.1

name	Bcar1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254593 GeneID:12927 MGI:108091
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005925 - focal adhesion [Evidence ISS] [Evidence IDA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005624 - membrane fraction [Evidence ISS]; GO:0001726 - ruffle [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence ISS] GO_process : GO:0007015 - actin filament organization [Evidence ISS]; GO:0050853 - B cell receptor signaling pathway [Evidence ISS]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0051301 - cell division [Evidence ISS]; GO:0016477 - cell migration [Evidence IDA] [Evidence ISS]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0007173 - epidermal growth factor receptor signaling pathway [Evidence ISS]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IDA]; GO:0008286 - insulin receptor signaling pathway [Evidence ISS]; GO:0007229 - integrin-mediated signaling pathway [Evidence ISS]; GO:0048011 - nerve growth factor receptor signaling pathway [Evidence ISS]; GO:0048008 - platelet-derived growth factor receptor signaling pathway [Evidence ISS] [Evidence IDA]; GO:0030335 - positive regulation of cell migration [Evidence ISS]; GO:0042981 - regulation of apoptosis [Evidence ISS]; GO:0001558 - regulation of cell growth [Evidence ISS]; GO:0050852 - T cell receptor signaling pathway [Evidence ISS] codon_start : 1 note : v-crk-associated tyrosine kinase substrate; p130 Cas product : breast cancer anti-estrogen resistance 1 protein_id : NP_034084.2

name	Cfdp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753412 CCDS:CCDS22680.1 GeneID:23837 MGI:1344403
definition	GO_component : GO:0005604 - basement membrane [Evidence TAS] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IDA]; GO:0008360 - regulation of cell shape [Evidence IDA] codon_start : 1 product : craniofacial development protein 1 protein_id : NP_035931.1

name	Tmem170 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313306 CCDS:CCDS22681.1 GeneID:66817 MGI:106426
definition	codon_start : 1 product : hypothetical protein LOC66817 protein_id : NP_080057.1

name	Chst5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910284 CCDS:CCDS22682.1 GeneID:56773 MGI:1931825
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0031228 - intrinsic to Golgi membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0001517 - N-acetylglucosamine 6-O-sulfotransferase activity [Evidence IDA]; GO:0008146 - sulfotransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0018146 - keratan sulfate biosynthesis [Evidence IDA]; GO:0006044 - N-acetylglucosamine metabolism [Evidence IDA]; GO:0006790 - sulfur metabolism [Evidence IDA] codon_start : 1 note : I-GlcNAc6ST product : carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 protein_id : NP_064334.1

name	4932417I16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677480 GeneID:234740 MGI:2685024
definition	codon_start : 1 product : hypothetical protein LOC234740 protein_id : NP_001028493.1

name	Gabarapl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542873 GeneID:93739 MGI:1890602
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0000139 - Golgi membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0006891 - intra-Golgi vesicle-mediated transport [Evidence ISS] codon_start : 1 note : ganglioside expression factor 2; GABA(A) receptor-associated protein like 2 product : gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2 protein_id : NP_080969.2

name	Adat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304859 CCDS:CCDS22684.1 GeneID:30947 MGI:1353631
definition	GO_function : GO:0008251 - tRNA specific adenosine deaminase activity [Evidence ISS] codon_start : 1 note : adenosine deaminase tRNA-specific 1 product : adenosine deaminase, tRNA-specific 1 protein_id : NP_038953.1

name	Kars (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716381 GeneID:85305 MGI:1934754
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0004824 - lysine-tRNA ligase activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0000049 - tRNA binding [Evidence ISS] GO_process : GO:0006430 - lysyl-tRNA aminoacylation [Evidence ISS]; GO:0008033 - tRNA processing [Evidence ISS] codon_start : 1 product : lysyl-tRNA synthetase protein_id : NP_444322.1

name	Terf2ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15618999 GeneID:57321 MGI:1929871
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0000781 - chromosome, telomeric region [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043047 - single-stranded telomeric DNA binding [Evidence ISS] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0000723 - telomere maintenance [Evidence IEA] codon_start : 1 product : telomeric repeat binding factor 2, interacting protein protein_id : NP_065609.1

name	EG627828 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918359 GeneID:627828 MGI:3643578
definition	codon_start : 1 product : similar to heterogeneous nuclear ribonucleoprotein A3, isoform 1 protein_id : XP_900134.1

name	EG627828 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918363 GeneID:627828 MGI:3643578
definition	codon_start : 1 product : similar to heterogeneous nuclear ribonucleoprotein A3, isoform 5 protein_id : XP_907560.1

name	LOC672498 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259098 GeneID:672498
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001480010.1

name	LOC672498 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259100 GeneID:672498
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001480015.1

name	Cntnap4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982591 GeneID:170571 MGI:2183572
definition	GO_component : GO:0030425 - dendrite [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : cell recognition protein CASPR4 product : contactin associated protein 4 protein_id : NP_569724.2

name	LOC100042061 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259045 GeneID:100042061
definition	codon_start : 1 product : similar to GDP-mannose 4, 6-dehydratase protein_id : XP_001477540.1

name	LOC100042040 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259043 GeneID:100042040
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 ESTs, 4 Proteins product : similar to 0610007P22Rik protein pseudo : _no_value transcript_id : XR_033230.1

clone name	MSMg01-505F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301A15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-370A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266B11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-413G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401E12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-520A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474M02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-389M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501G02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-277O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474G12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-395G20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-050J14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-173B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109D12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-342H20.b	B6Ng01-342H20.g
ACC	GA125558	GA125559
length	1,027	1,114
definition	B6Ng01-342H20.b	B6Ng01-342H20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(114,886,746 - 114,887,765)	(114,970,620 - 114,971,743)
sequence	gaattccacaatattcatcatgatctcacccagatttgattaaatattaa aacaatctaattttaaagacggccacactaccagttccaaggattgagct ctgaacatacacttgggaacacagttcaagcagaacaagatatcttggaa tttataggtgtatatggcttttgtatttgttctacttagacatttgttaa acattttggttgggattgtatgctaaagtttaaaccaagtccagaattgt ttgggccattgtttgtttcaatattattttccttccatttctttctgtat caccattccatctattatacattgtgtgtatgtcggcatgatttgtcacg tcaaaggagtacctgcttttgctccttcttctcttttgatagcataagct cattctatgtcttcaacacataatcttttgccagctcgaacctgctattg aactattttagtgatttatctcccctccactgttggtagtttacaaagtg agaactatttgcaatttttaaaaagtcatttccttatctttatcgattct ttagtttattgaatcattattgatacactttcctttaatttttattacat ttatgtttatttgggggtatggatcggggtatcatagcacacatgcagag gtcagaggatgagttgaggagttagttcatgtggctctcgacaactgaag tcaggttatcagcatctattcctcctgagctgtctctcagcattccttcc attaattctctaagcattattcccttcaacttcgggcccttctataacag ggtttatgtagctgctctgtgtgtagtgtggtgaatatgtcacttcaagt ctatgcatttcctgttctccctcctcacatcttggccaactctgtctctc cctcctatcactctgcccttcttccatggactattttgggctgctttttt tttttttcttggctgttatttgtttagggacttccctagaactaggtttc aaaaggctttcacaccccttggcatag	gaattcttctttatatcagcagagtatgcctatgcaagcactcaatattt actaagaagttgaaattgcagacatgagaacaaatgaatgtaagctttgg atggtgtgttgatttttctttagagataccaaattaatatttacttcttt gactatttagctattcactaaagacaaattaccgaaaaaatgtcagtaaa gcaattatggcagaaaagaggaagagtaaatatagacaacactcctgccc aaattttaggaaataattatgaaagaaaatgtcaccctcagagcaaatag aaatcacttaatatataagtataaatagggagtctatgggggggtggggg aatcacattagaaaattatatatctttctttcctatgatgtgaaatgcag gcatcaaagtgcacacatttaaacattctttgcacgggagccggggcaat gtatttagcatccaatgcataataagtggtcagtccataattgcaaatgt cattcaactctggtagcttcctggttccacggccgccaaggagaaaagca aaggggactcggcctcagttcacaataggcctcgcgttaccattaagttg aatacaattagacttacaattaaatgctatatatttttttttaaagaaaa ttatttctccatcaagtttttacaatggcctttggcacagcacactgaaa ttggaacctgagaataaaatctcggttaaatgaaaagctccaattagctg acaatctccatacttcagaatctctcccgtgtatatttctccagtgacct ttctaatgacaaagccagaaatgatagtcaattaaatttatatcccaagg cacactataaatttgtcaggctcaaaacaaatgcactgtgaagttcataa aaatcagttctagctaccagggaaggggtaaaagaaagtagtcagtcagg ccttagtcttcacatgagacgactcattgatgcttcatgtctacttaagg atgaggactaaagcagccttcagtgatgctaaccatcacgcgttaattac ccagttatttctgcctcaaatcacataggacgatagaaaccattgtagtc acgattcatatgca
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr8_114886746_114887765
seq2: B6Ng01-342H20.b_48_1074

seq1  GAATTCCACAATATTCATCATGATCTCACCCAGATTTGATTAAATATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAATATTCATCATGATCTCACCCAGATTTGATTAAATATTAA  50

seq1  AACAATCTAATTTTAAAGACGGCCACACTACCAGTTCCAAGGATTGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCTAATTTTAAAGACGGCCACACTACCAGTTCCAAGGATTGAGCT  100

seq1  CTGAACATACACTTGGGAACACAGTTCAAGCAGAACAAGATATCTTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACATACACTTGGGAACACAGTTCAAGCAGAACAAGATATCTTGGAA  150

seq1  TTTATAGGTGTATATGGCTTTTGTATTTGTTCTACTTAGACATTTGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGGTGTATATGGCTTTTGTATTTGTTCTACTTAGACATTTGTTAA  200

seq1  ACATTTTGGTTGGGATTGTATGCTAAAGTTTAAACCAAGTCCAGAATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTGGTTGGGATTGTATGCTAAAGTTTAAACCAAGTCCAGAATTGT  250

seq1  TTGGGCCATTGTTTGTTTCAATATTATTTTCCTTCCATTTCTTTCTGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCATTGTTTGTTTCAATATTATTTTCCTTCCATTTCTTTCTGTAT  300

seq1  CACCATTCCATCTATTATACATTGTGTGTATGTCGGCATGATTTGTCACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTCCATCTATTATACATTGTGTGTATGTCGGCATGATTTGTCACG  350

seq1  TCAAAGGAGTACCTGCTTTTGCTCCTTCTTCTCTTTTGATAGCATAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGAGTACCTGCTTTTGCTCCTTCTTCTCTTTTGATAGCATAAGCT  400

seq1  CATTCTATGTCTTCAACACATAATCTTTTGCCAGCTCGAACCTGCTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATGTCTTCAACACATAATCTTTTGCCAGCTCGAACCTGCTATTG  450

seq1  AACTATTTTAGTGATTTATCTCCCCTCCACTGTTGGTAGTTTACAAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTTAGTGATTTATCTCCCCTCCACTGTTGGTAGTTTACAAAGTG  500

seq1  AGAACTATTTGCAATTTTTAAAAAGTCATTTCCTTATCTTTATCGATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATTTGCAATTTTTAAAAAGTCATTTCCTTATCTTTATCGATTCT  550

seq1  TTAGTTTATTGAATCATTATTGATACACTTTCCTTTAATTTTTATTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTATTGAATCATTATTGATACACTTTCCTTTAATTTTTATTACAT  600

seq1  TTATGTTTATTTGGGGGTATGGATCGGGGTATCATAGCACACATGCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTTATTTGGGGGTATGGATCGGGGTATCATAGCACACATGCAGAG  650

seq1  GTCAGAGGATGAGTTGAGGAGTTAGTTCATGTGGCTCTCGACAACTGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGGATGAGTTGAGGAGTTAGTTCATGTGGCTCTCGACAACTGAAG  700

seq1  TCAGGTTATCAGCATCTATTCCTCCTGAGCTGTCTCTCAGCATTCCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTATCAGCATCTATTCCTCCTGAGCTGTCTCTCAGCATTCCTTCC  750

seq1  ATTAATTCTCTAAGCATTATTCCCTTCAACTTCGGGCCCTTCTATAACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCTCTAAGCATTATTCCCTTCAACTTCGGGCCCTTCTATAACAG  800

seq1  GG-TTATGTAGCTGCTCTGTGTGTAGTGTGGTGAATATGTCACTTCAAGT  849
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATGTAGCTGCTCTGTGTGTAGTGTGGTGAATATGTCACTTCAAGT  850

seq1  CTATGCA-TTCCTGTTCTCCCTCCTCAACATCTT-GCCCACTCTGTCTCT  897
      ||||||| |||||||||||||||||| ||||||| ||| |||||||||||
seq2  CTATGCATTTCCTGTTCTCCCTCCTC-ACATCTTGGCCAACTCTGTCTCT  899

seq1  CCCTTCTTATCACTCTGCCC-TCTTCCATGGACTATTTT-GGCTGCTTTT  945
      ||| || ||||||||||||| |||||||||||||||||| ||||||||||
seq2  CCC-TCCTATCACTCTGCCCTTCTTCCATGGACTATTTTGGGCTGCTTTT  948

seq1  TTTTTTTTTC-TGGCTGTTATTTGTTTAGTGACTTCTCTAG-ACTAGGTT  993
      |||||||||| |||||||||||||||||| |||||| |||| ||||||||
seq2  TTTTTTTTTCTTGGCTGTTATTTGTTTAGGGACTTCCCTAGAACTAGGTT  998

seq1  TCCAAAGGCCTTCACACCC--TTGCATAG  1020
      || |||||| |||||||||  | ||||||
seq2  TCAAAAGGCTTTCACACCCCTTGGCATAG  1027

seq1: chr8_114970620_114971743
seq2: B6Ng01-342H20.g_66_1179 (reverse)

seq1  TGCATATGAATTCCGTGACTTCCAATGGTGTCCTATCGTCCTATGTGGAT  50
      |||||||||||  |||||| | ||||||| | |||||||||||||||  |
seq2  TGCATATGAAT--CGTGAC-TACAATGGT-TTCTATCGTCCTATGTGATT  46

seq1  TGAAGCAGAAATAAACTGGGGTAATTTAACGCGTGATGGTAAGCATCACT  100
      ||| |||||||| |||| |||||| ||||||||||||||| |||||||||
seq2  TGAGGCAGAAAT-AACT-GGGTAA-TTAACGCGTGATGGTTAGCATCACT  93

seq1  GAAGGCTGCTTTTAGTTCTTCATCCTTAGGTAGACATG-AGCATCATTGA  149
      ||||||||| ||||| || ||||||||| ||||||||| ||||||| |||
seq2  GAAGGCTGC-TTTAG-TCCTCATCCTTAAGTAGACATGAAGCATCAATGA  141

seq1  GTCGGTCTCATGTGAAGACTAAGGCCTGACTGACTACCTTCTTTTTACCC  199
      ||| ||||||||||||||||||||||||||||||||| ||| ||||||||
seq2  GTC-GTCTCATGTGAAGACTAAGGCCTGACTGACTACTTTC-TTTTACCC  189

seq1  CTTCCCTGGTAGCTAGAACTGATTTTTATGAACTTCACAGTGCATTTGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTGGTAGCTAGAACTGATTTTTATGAACTTCACAGTGCATTTGTT  239

seq1  TTGAGCCTGACAAATTTATAGTGTGCCTTGGGATATAAATTTAATTGACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCTGACAAATTTATAGTGTGCCTTGGGATATAAATTTAATTGACT  289

seq1  ATCATTTCTGGCTTTGTCATTAGAAAGGTCACTGGAGAAATATACACGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCTGGCTTTGTCATTAGAAAGGTCACTGGAGAAATATACACGGG  339

seq1  AGAGATTCTGAAGTATGGAGATTGTCAGCTAATTGGAGCTTTTCATTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTCTGAAGTATGGAGATTGTCAGCTAATTGGAGCTTTTCATTTAA  389

seq1  CCGAGATTTTATTCTCAGGTTCCAATTTCAGTGTGCTGTGCCAAAGGCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGATTTTATTCTCAGGTTCCAATTTCAGTGTGCTGTGCCAAAGGCCA  439

seq1  TTGTAAAAACTTGATGGAGAAATAATTTTCTTTAAAAAAAAATATATAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAAACTTGATGGAGAAATAATTTTCTTTAAAAAAAAATATATAGC  489

seq1  ATTTAATTGTAAGTCTAATTGTATTCAACTTAATGGTAACGCGAGGCCTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTGTAAGTCTAATTGTATTCAACTTAATGGTAACGCGAGGCCTA  539

seq1  TTGTGAACTGAGGCCGAGTCCCCTTTGCTTTTCTCCTTGGCGGCCGTGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAACTGAGGCCGAGTCCCCTTTGCTTTTCTCCTTGGCGGCCGTGGA  589

seq1  ACCAGGAAGCTACCAGAGTTGAATGACATTTGCAATTATGGACTGACCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGAAGCTACCAGAGTTGAATGACATTTGCAATTATGGACTGACCAC  639

seq1  TTATTATGCATTGGATGCTAAATACATTGCCCCGGCTCCCGTGCAAAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATGCATTGGATGCTAAATACATTGCCCCGGCTCCCGTGCAAAGAA  689

seq1  TGTTTAAATGTGTGCACTTTGATGCCTGCATTTCACATCATAGGAAAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAATGTGTGCACTTTGATGCCTGCATTTCACATCATAGGAAAGAA  739

seq1  AGATATATAATTTTCTAATGTGATTCCCCCACCCCCCCATAGACTCCCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATATAATTTTCTAATGTGATTCCCCCACCCCCCCATAGACTCCCTA  789

seq1  TTTATACTTATATATTAAGTGATTTCTATTTGCTCTGAGGGTGACATTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTTATATATTAAGTGATTTCTATTTGCTCTGAGGGTGACATTTT  839

seq1  CTTTCATAATTATTTCCTAAAATTTGGGCAGGAGTGTTGTCTATATTTAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATAATTATTTCCTAAAATTTGGGCAGGAGTGTTGTCTATATTTAC  889

seq1  TCTTCCTCTTTTCTGCCATAATTGCTTTACTGACATTTTTTCGGTAATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTTTTCTGCCATAATTGCTTTACTGACATTTTTTCGGTAATTT  939

seq1  GTCTTTAGTGAATAGCTAAATAGTCAAAGAAGTAAATATTAATTTGGTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTAGTGAATAGCTAAATAGTCAAAGAAGTAAATATTAATTTGGTAT  989

seq1  CTCTAAAGAAAAATCAACACACCATCCAAAGCTTACATTCATTTGTTCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGAAAAATCAACACACCATCCAAAGCTTACATTCATTTGTTCTC  1039

seq1  ATGTCTGCAATTTCAACTTCTTAGTAAATATTGAGTGCTTGCATAGGCAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCAATTTCAACTTCTTAGTAAATATTGAGTGCTTGCATAGGCAT  1089

seq1  ACTCTGCTGATATAAAGAAGAATTC  1124
      |||||||||||||||||||||||||
seq2  ACTCTGCTGATATAAAGAAGAATTC  1114

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information