BAC Information

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BAC

Clone NameB6Ng01-342J19
Chromosome8 (Build37)
Map Location 114,886,746 - 114,887,370
singlet/doubletsinglet
Overlap genenone
Upstream geneFa2h, Wdr59, Znrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498, LOC100042040
Downstream geneCntnap4, LOC100042061
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342J19.b
ACCGA125644
length624
definitionB6Ng01-342J19.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccagtattcgtcatgatctccccggagttgattaaatattaaaa
caatctaatttaaaacacggccagtgtacctcttccaaggattgagctct
gaacatacacttgggaacacatttcaagcaaaacaagatatcttggaatt
tatgagtgtatatggctttagtatttgttctacttaaacatttgttaaac
attttggttgggattgtatgctaaagttaaaaccaagtccagaattgttt
gggccattgatagtttcaatattattttccttccatttctttctgtatca
ccattccatctattatacattgtgtgtatgtccgcttgatttgtcacgtc
aaaggagtacctgcttttgctccttcttctcttttgatagcataagctca
ttctatgtcttcaacacataatcttttgccagctcgaacctgctattgaa
ctattttggggatttatctaccctccactgttggtagtttacaaagtgag
aactatttgctatttttctggagtcatttccttatctttatcgattcttt
aatttatcgaatcattattgatacacttgcctttaattcttagtacattt
atgtttatttgggaggtatggatc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_114886746_114887370
seq2: B6Ng01-342J19.b_44_667

seq1  GAATTCCACAATATTCATCATGATCTCACCCAGATTTGATTAAATATTAA  50
      ||||||| || ||||| |||||||||| ||| || |||||||||||||||
seq2  GAATTCC-CAGTATTCGTCATGATCTC-CCCGGAGTTGATTAAATATTAA  48

seq1  AACAATCTAATTTTAAAGACGGCCACACTACCAGTTCCAAGGATTGAGCT  100
      ||||||||||||| ||| |||||||   ||||  ||||||||||||||||
seq2  AACAATCTAATTTAAAACACGGCCAGTGTACCTCTTCCAAGGATTGAGCT  98

seq1  CTGAACATACACTTGGGAACACAGTTCAAGCAGAACAAGATATCTTGGAA  150
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CTGAACATACACTTGGGAACACATTTCAAGCAAAACAAGATATCTTGGAA  148

seq1  TTTATAGGTGTATATGGCTTTTGTATTTGTTCTACTTAGACATTTGTTAA  200
      |||||  |||||||||||||| |||||||||||||||| |||||||||||
seq2  TTTATGAGTGTATATGGCTTTAGTATTTGTTCTACTTAAACATTTGTTAA  198

seq1  ACATTTTGGTTGGGATTGTATGCTAAAGTTTAAACCAAGTCCAGAATTGT  250
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACATTTTGGTTGGGATTGTATGCTAAAGTTAAAACCAAGTCCAGAATTGT  248

seq1  TTGGGCCATTGTTTGTTTCAATATTATTTTCCTTCCATTTCTTTCTGTAT  300
      ||||||||||| | ||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCATTGATAGTTTCAATATTATTTTCCTTCCATTTCTTTCTGTAT  298

seq1  CACCATTCCATCTATTATACATTGTGTGTATGTCGGCATGATTTGTCACG  350
      |||||||||||||||||||||||||||||||||| || ||||||||||||
seq2  CACCATTCCATCTATTATACATTGTGTGTATGTCCGCTTGATTTGTCACG  348

seq1  TCAAAGGAGTACCTGCTTTTGCTCCTTCTTCTCTTTTGATAGCATAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGAGTACCTGCTTTTGCTCCTTCTTCTCTTTTGATAGCATAAGCT  398

seq1  CATTCTATGTCTTCAACACATAATCTTTTGCCAGCTCGAACCTGCTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATGTCTTCAACACATAATCTTTTGCCAGCTCGAACCTGCTATTG  448

seq1  AACTATTTTAGTGATTTATCTCCCCTCCACTGTTGGTAGTTTACAAAGTG  500
      ||||||||| | ||||||||| ||||||||||||||||||||||||||||
seq2  AACTATTTTGGGGATTTATCTACCCTCCACTGTTGGTAGTTTACAAAGTG  498

seq1  AGAACTATTTGCAATTTTTAAAAAGTCATTTCCTTATCTTTATCGATTCT  550
      |||||||||||| ||||||    |||||||||||||||||||||||||||
seq2  AGAACTATTTGCTATTTTTCTGGAGTCATTTCCTTATCTTTATCGATTCT  548

seq1  TTAGTTTATTGAATCATTATTGATACACTTTCCTTTAATTTTTATTACAT  600
      ||| ||||| |||||||||||||||||||| ||||||||| ||| |||||
seq2  TTAATTTATCGAATCATTATTGATACACTTGCCTTTAATTCTTAGTACAT  598

seq1  TTATGTTTATTTGGG-GGTATGGATC  625
      ||||||||||||||| ||||||||||
seq2  TTATGTTTATTTGGGAGGTATGGATC  624