BAC Information

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BAC

Clone NameB6Ng01-343D16
Chromosome8 (Build37)
Map Location 69,189,990 - 69,310,150
singlet/doubletdoublet
Overlap geneNpy5r, Npy1r
Upstream geneMarch1, LOC100040986, 1810029B16Rik, Tktl2
Downstream geneBC053440, LOC665453, Nat1, Nat2, LOC100041265, Nat3, Psd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-343D16.bB6Ng01-343D16.g
ACCGA126062GA126063
length135960
definitionB6Ng01-343D16.b B6Ng01-343D16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,189,990 - 69,190,124)(69,309,191 - 69,310,150)
sequence
tccaaaacaaacttgactttatgataccaaaacaggcatagcaaaagctc
tggaaaacaagacagcaaaaaagtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtaacagcaaaca
gaattcatcagtgtcagagataggactaacagaggcacacacacaatctg
tttggcattgagagaataccaaaggaacattggcatgacacccacgactc
ctttccaagagagaattggagagcccacaccacccacacttcccaggtgg
ctaaaaaaataaggggatcattactggatagctgagcagtttcatgatgt
ttgaaacaaagtgtccatgcctgcctttcaagattaaaaacatcaaggga
ctcgttgctaggtatttttttttaaagatttagataaattattgtacaaa
ggaagaaagaaggtggcctaattgaggagaggcagatcctggtctttcct
actgctgctgaaatgtctctgctcttggcaaagatatttttctgaaacca
ggagtgactttgcacaaaagattacataataatatggtatatatatatat
atatatatataaattcagcagagttatcactctacagttcatagaatttt
tttgaagtgtttggtgctcatgtatttttagttgtgttcacacacctttg
tgaatacaaatgtttaccagtgccccccattacagattcctgatttcatt
gccttaaaattagggaaaattctttctacgtggttttagttctaatctta
ctagagatgtcgagaatttgagagccacactttccttactgctctcaaga
gtctgtcttttgatggtatgaatcaactgtatagagtagagttgtctaag
tttgtacttcctgggggtttatgagtctcttcaatttatagattcatttt
taacagatttgaggagatttgggtcattgtttttacaccttgtttttcct
tttctccttttctctggtgacttcctgtgtatgtattagttagggttctc
taaaggaacagaacctataggataatatatgtatttatgtgtatgtatat
atgtatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69189990_69190124
seq2: B6Ng01-343D16.b_49_183

seq1  TCCAAAACAAACTTGACTTTATGATACCAAAACAGGCATAGCAAAAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACAAACTTGACTTTATGATACCAAAACAGGCATAGCAAAAGCTC  50

seq1  TGGAAAACAAGACAGCAAAAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAACAAGACAGCAAAAAAGTGTGTGTGTGTGTGTGTGTGTGTGTGT  100

seq1  GTGTGTGTGTGTGTGTGTGTGTGTAACTGCAAACA  135
      ||||||||||||||||||||||||||| |||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTAACAGCAAACA  135

seq1: chr8_69309191_69310150
seq2: B6Ng01-343D16.g_66_1025 (reverse)

seq1  ATACATACATATATACATACACATAAATACATATATTTATCCTATAGGTT  50
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATACATACATATATACATACACATAAATACATATA-TTATCCTATAGGTT  49

seq1  CTGTTCCTTTAGAGAACCCTAACTAATACATACACAGGAAGTCACCAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTTTAGAGAACCCTAACTAATACATACACAGGAAGTCACCAGAG  99

seq1  -AAAGGAGAAAAGGAAAAACAAGGTGTAAAAACAATGACCCAAATCTCCT  149
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGAAAAGGAAAAACAAGGTGTAAAAACAATGACCCAAATCTCCT  149

seq1  CAAATCTGTTAAAAATGAATCTATAAATTGAAGAGACTCATAAACCCCCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTGTTAAAAATGAATCTATAAATTGAAGAGACTCATAAACCCCCA  199

seq1  GGAAGTACAAACTTAGACAACTCTACTCTATACAGTTGATTCATACCATC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTACAAACTTAGACAACTCTACTCTATACAGTTGATTCATACCATC  249

seq1  AAAAGACAGACTCTTGAGAGCAGTAAGGAAAGTGTGGCTCTCAAATTCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACAGACTCTTGAGAGCAGTAAGGAAAGTGTGGCTCTCAAATTCTC  299

seq1  GACATCTCTAGTAAGATTAGAACTAAAACCACGTAGAAAGAATTTTCCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTCTAGTAAGATTAGAACTAAAACCACGTAGAAAGAATTTTCCCT  349

seq1  AATTTTAAGGCAATGAAATCAGGAATCTGTAATGGGGGGCACTGGTAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAGGCAATGAAATCAGGAATCTGTAATGGGGGGCACTGGTAAAC  399

seq1  ATTTGTATTCACAAAGGTGTGTGAACACAACTAAAAATACATGAGCACCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTCACAAAGGTGTGTGAACACAACTAAAAATACATGAGCACCA  449

seq1  AACACTTCAAAAAAATTCTATGAACTGTAGAGTGATAACTCTGCTGAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTCAAAAAAATTCTATGAACTGTAGAGTGATAACTCTGCTGAATT  499

seq1  TATATATATATATATATATATATACCATATTATTATGTAATCTTTTGTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATACCATATTATTATGTAATCTTTTGTGC  549

seq1  AAAGTCACTCCTGGTTTCAGAAAAATATCTTTGCCAAGAGCAGAGACATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCACTCCTGGTTTCAGAAAAATATCTTTGCCAAGAGCAGAGACATT  599

seq1  TCAGCAGCAGTAGGAAAGACCAGGATCTGCCTCTCCTCAATTAGGCCACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGCAGTAGGAAAGACCAGGATCTGCCTCTCCTCAATTAGGCCACC  649

seq1  TTCTTTCTTCCTTTGTACAATAATTTATCTAAATCTTTAAAAAAAAATAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTCCTTTGTACAATAATTTATCTAAATCTTTAAAAAAAAATAC  699

seq1  CTAGCAACGAGTCCCTTGATGTTTTTAATCTTGAAAGGCAGGCATGGACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAACGAGTCCCTTGATGTTTTTAATCTTGAAAGGCAGGCATGGACA  749

seq1  CTTTGTTTCAAACATCATGAAACTGCTCAGCTATCCAGTAATGATCCCCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTCAAACATCATGAAACTGCTCAGCTATCCAGTAATGATCCCCT  799

seq1  TATTTTTTTAGCCACCTGGGAAGTGTGGGTGGTGTGGGCTCTCCAATTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTAGCCACCTGGGAAGTGTGGGTGGTGTGGGCTCTCCAATTCT  849

seq1  CTCTTGGAAAGGAGTCGTGGGTGTCATGCCAATGTTCCTTTGGTATTCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGAAAGGAGTCGTGGGTGTCATGCCAATGTTCCTTTGGTATTCTC  899

seq1  TCAATGCCAAACAGATTGTGTGTGTGCCTCTGTTAGTCCTATCTCTGACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCCAAACAGATTGTGTGTGTGCCTCTGTTAGTCCTATCTCTGACA  949

seq1  CTGATGAATTC  960
      |||||||||||
seq2  CTGATGAATTC  960