BAC Information

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BAC

Clone NameB6Ng01-344H17
Chromosome8 (Build37)
Map Location 8,086,040 - 8,086,890
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039836, Efnb2, 9430010O03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344H17.bB6Ng01-344H17.g
ACCGA126957GA126958
length1,198861
definitionB6Ng01-344H17.b B6Ng01-344H17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccaatttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatatatattggatattag
tcccctatctgatttaggataggtaaagatcctttcccaatctgttggtg
gcctttttgtcttattgatggtgtcttttgccttacagaagctttgcaat
tttatgaggtcccatttgttgattcttgatcttacagtacaagccattgc
tgttctattcaggaattttccccctgtatccatatcttcgaggctttccc
cccaccttctcctctataagtttcagtgtctctggttttatgtggagttc
cttaatccacttagatttgaccatagtacaaggagataggaatggatcaa
ttcgaattcttctacatgataaccgccagttgtaccagcaccatttgttg
aaaatgctgtcttttttccactggacggttttagctcccttgtcaaagat
caagtgaccagaggtgtgtgggttcgtttctgggtcttcaattctattcc
attggtctacttgtctgttggctataccagtaccgtgcagtttttttttt
ttttttttaatcactattgctctgtagtacagctttaggtcaggcatggt
gattccatcagaggttcttttatccttgagcagagtttttgatattctag
gttttttgttattccagatgaatctgcagattgccctttccaattcattg
aagaattgagttggaattttgatggggattgcattgaatctgtagattac
ttttggcaagatggccatttttactatattgatcctgccaatccatgagt
atgggagatcttttccatctttctgagatcttctttattttctttcttca
gagacttgaagttcttatcatacagctctttcactttccttcagtagagt
catgcccagggtattttatattatttggtgactattgaagaagggtgtgt
tccctaatttcttttctcagcctgtcattccttttgtgtagagaaggcca
tgacttgttgagttattttatccagaattctcatgaacctggttattcag
tttagggagttctctgtgtggatttagggctcactataactaccaatcat
cgcaagaattgacctcctctgcatgatgatcccctgactccctcgtat

gaattcagtaatgcccataataagttataaatctgtataagacctcaagc
caaccactgtgactaaaagctgatatacactccagtcggagcagtcacac
agccatgtacttcaacacatactcccagtaggattccctcaccatccttc
ctcatctggagcactcctgatatgtatgtacaactatcccataatagcct
tttatataaggggacacagttatacataggagcaactgagctgaccctgg
acaaaagcttcatggaaggagttgtatattgaagtttaaggcataccttc
aatgatatggccaaagacaaaaggaaatttaaagtggcatgcttaacata
tatgagttcaaacaaggaagaggacacctgtctgagacacagagaaaatc
tcagtaaaactcaaaaagaggtggatgggaagggatgtttggggtcacct
ctgtcacacagactctgttcaggaagggatttattttacaaatgtgatca
tagattttttttctaacctgaaattgtgctggagttgactagtgtgttgt
taccctcttggtctctcctctgcccaatctaaagctctggctttcaatat
ttacaacaaaagaaaaagttatagtcagaaagggaagacgctgccatgaa
tttccaaagatttcccctctccccttccccagtgtttcctgagcttagat
gctggagtgttttgtagatgtatggagtgggattggattttttttttttt
ttttttactatttagggcttttctgttagtagtctttcatccttctgcaa
agagaagaattgatgaggggtttccttaaagaccttacatgacagaaaaa
ttatcatacgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_8086040_8086890
seq2: B6Ng01-344H17.g_68_928

seq1  GAATTCAGTAATGCCCATAATAAGTTATAAATCTGTATAAGACCTCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAATGCCCATAATAAGTTATAAATCTGTATAAGACCTCAAGC  50

seq1  CAACCACTGTGACTAAAAGCTGATATACACTCCAGTCGGAGCAGTCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACTGTGACTAAAAGCTGATATACACTCCAGTCGGAGCAGTCACAC  100

seq1  AGCCATGTACTTCAACACATACTCCCAGTAGGATTCCCTCACCATCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGTACTTCAACACATACTCCCAGTAGGATTCCCTCACCATCCTTC  150

seq1  CTCATCTGGAGCACTCCTGATATGTATGTACAACTATCCCATAATAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGGAGCACTCCTGATATGTATGTACAACTATCCCATAATAGCCT  200

seq1  TTTATATAAGGGGACACAGTTATACATAGGAGCAACTGAGCTGACCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATAAGGGGACACAGTTATACATAGGAGCAACTGAGCTGACCCTGG  250

seq1  ACAAAAGCTTCATGGAAGGAGTTGTATATTGAAGTTTAAGGCATACCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCTTCATGGAAGGAGTTGTATATTGAAGTTTAAGGCATACCTTC  300

seq1  AATGATATGGCCAAAGACAAAAGGAAATTTAAAGTGGCATGCTTAACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATGGCCAAAGACAAAAGGAAATTTAAAGTGGCATGCTTAACATA  350

seq1  TATGAGTTCAAACAAGGAAGAGGACACCTGTCTGAGACACAGAGAAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTTCAAACAAGGAAGAGGACACCTGTCTGAGACACAGAGAAAATC  400

seq1  TCAGTAAAACTCAAAAAGAGGTGGATGGGAAGGGATGTTTGGGGTCACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAAACTCAAAAAGAGGTGGATGGGAAGGGATGTTTGGGGTCACCT  450

seq1  CTGTCACACAGACTCTGTTCAGGAAGGGATTTATTTTACAAATGTGATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACACAGACTCTGTTCAGGAAGGGATTTATTTTACAAATGTGATCA  500

seq1  TAGATTTTTTTTCTAACCTGAAATTGTGCTGGAGTTGACTAGTGTGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTTTTTCTAACCTGAAATTGTGCTGGAGTTGACTAGTGTGTTGT  550

seq1  TACCCTCTTGGTCTCTCCTCTGCCCAATCTAAAGCTCTGGCTTTCAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCTTGGTCTCTCCTCTGCCCAATCTAAAGCTCTGGCTTTCAATAT  600

seq1  TTACAACAAAAGAAAAAGTTATAGTCAGAAAGGGAAGACGCTGCCATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACAAAAGAAAAAGTTATAGTCAGAAAGGGAAGACGCTGCCATGAA  650

seq1  TTTCCAAAGATTTCCCCTCTCCCCTTCCCCAGTGTTTCCTGAGCTTAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAGATTTCCCCTCTCCCCTTCCCCAGTGTTTCCTGAGCTTAGAT  700

seq1  GCTGGAGTGTTTTGTAGATGTATGGAGTGGGATTGGA--TTTTTTTTTTT  748
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  GCTGGAGTGTTTTGTAGATGTATGGAGTGGGATTGGATTTTTTTTTTTTT  750

seq1  TTTTTTACTATTTAGGGC-TTTCTG-TAGTAGTC-TCCAT-CTTCTGCAA  794
      |||||||||||||||||| |||||| |||||||| | ||| |||||||||
seq2  TTTTTTACTATTTAGGGCTTTTCTGTTAGTAGTCTTTCATCCTTCTGCAA  800

seq1  AGAGAAG-ATTGATGA-GGGTTTCC-TAAAGACCTTACATGACAGAAAAA  841
      ||||||| |||||||| |||||||| ||||||||||||||||||||||||
seq2  AGAGAAGAATTGATGAGGGGTTTCCTTAAAGACCTTACATGACAGAAAAA  850

seq1  -TAGCATACGC  851
       || |||||||
seq2  TTATCATACGC  861


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