MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-344L20
Chromosome	8 (Build37)
Map Location	81,908,018 - 82,033,191
singlet/doublet	doublet
Overlap gene	Smad1, LOC666378, LOC666388
Upstream gene	Ttc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7, LOC100039466, Lsm6, EG666340, EG666346, D630040G17Rik, 1700011L22Rik, Mmaa, A630049P17
Downstream gene	LOC666392, Otud4, Tpd52-ps, Abce1, Anapc10, LOC100039439, Hhip, LOC546075, Gypa
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ttc29 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73301 MGI:1920551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pou4f2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18997 MGI:102524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039422 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 841 ESTs

name	Rbmxrt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19656 MGI:1343045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc10a7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76775 MGI:1924025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039466 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Lsm6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78651 MGI:1925901
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666340 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666340 MGI:3643693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1040 ESTs, 4 Proteins

name	EG666346 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666346 MGI:3643698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	D630040G17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622675 MGI:2444807
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700011L22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67687 MGI:1914937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein

name	Mmaa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109136 MGI:1923805
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630049P17 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:234479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Smad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17125 MGI:109452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC666388 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC666392 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Otud4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73945 MGI:1098801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpd52-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107730 MGI:107737
definition	gene_synonym : Tpd52-rs1 note : tumor protein D52, pseudogene pseudo : _no_value

name	Abce1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24015 MGI:1195458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Anapc10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68999 MGI:1916249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039439 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039439
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Hhip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15245 MGI:1341847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546075 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 97 ESTs, 4 Proteins pseudo : _no_value

name	Gypa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14934 MGI:95880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc29 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328520 GeneID:73301 MGI:1920551
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 29 transcript_id : NM_183096.2

name	Pou4f2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059066 GeneID:18997 MGI:102524
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : POU domain, class 4, transcription factor 2 transcript_id : NM_138944.2

name	LOC100039422 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258949 GeneID:100039422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 564 ESTs product : similar to ribosomal protein S25, transcript variant 2 transcript_id : XM_001472951.1

name	LOC100039422 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258947 GeneID:100039422
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 840 ESTs product : similar to ribosomal protein S25, transcript variant 1 transcript_id : XM_001472932.1

name	Rbmxrt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83699419 GeneID:19656 MGI:1343045
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein, X chromosome retrogene transcript_id : NM_009033.2

name	Slc10a7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113199772 GeneID:76775 MGI:1924025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 10 (sodium/bile acid cotransporter family), member 7 transcript_id : NM_029736.1

name	Lsm6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802913 GeneID:78651 MGI:1925901
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) transcript_id : NM_030145.2

name	EG666340 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258951 GeneID:666340 MGI:3643693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1040 ESTs, 4 Proteins product : predicted gene, EG666340 transcript_id : XM_983151.2

name	D630040G17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124358943 GeneID:622675 MGI:2444807
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D630040G17 gene transcript_id : NM_178267.3

name	1700011L22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383663 GeneID:67687 MGI:1914937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein product : RIKEN cDNA 1700011L22 gene, transcript variant 1 transcript_id : XM_134463.3

name	Mmaa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383676 GeneID:109136 MGI:1923805
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methylmalonic aciduria (cobalamin deficiency) type A transcript_id : NM_133823.3

name	A630049P17 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258945 GeneID:234479
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein A630049P17 transcript_id : XM_001472774.1

name	Smad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476186 GeneID:17125 MGI:109452
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 1 (Drosophila) transcript_id : NM_008539.3

name	Otud4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487190 GeneID:73945 MGI:1098801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : OTU domain containing 4 transcript_id : NM_001081164.1

name	Abce1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205430 GeneID:24015 MGI:1195458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family E (OABP), member 1 transcript_id : NM_015751.2

name	Anapc10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130278 GeneID:68999 MGI:1916249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anaphase promoting complex subunit 10 transcript_id : NM_026904.2

name	Hhip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328502 GeneID:15245 MGI:1341847
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hedgehog-interacting protein transcript_id : NM_020259.3

name	Gypa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185917 GeneID:14934 MGI:95880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycophorin A transcript_id : NM_010369.3

name	Ttc29 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328521 CCDS:CCDS22428.1 GeneID:73301 MGI:1920551
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : NYD-SP14 protein protein_id : NP_898919.2

name	Pou4f2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059067 CCDS:CCDS22429.1 GeneID:18997 MGI:102524
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] [Evidence TAS] [Evidence ISS] GO_process : GO:0007411 - axon guidance [Evidence IMP]; GO:0007409 - axonogenesis [Evidence IMP]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] [Evidence TAS]; GO:0002073 - retina development (sensu Mammalia) [Evidence IMP] codon_start : 1 note : POU domain, class 4, transcription factor, related sequence 1 product : POU domain, class 4, transcription factor 2 protein_id : NP_620394.2

name	LOC100039422 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258948 GeneID:100039422
definition	codon_start : 1 product : similar to ribosomal protein S25 isoform 1 protein_id : XP_001472982.1

name	LOC100039422 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258950 GeneID:100039422
definition	codon_start : 1 product : similar to ribosomal protein S25 isoform 2 protein_id : XP_001473001.1

name	Rbmxrt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83699420 CCDS:CCDS22430.1 GeneID:19656 MGI:1343045
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IDA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : hnRNP G product : RNA binding motif protein, X chromosome retrogene protein_id : NP_033059.2

name	Slc10a7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113199773 GeneID:76775 MGI:1924025
definition	codon_start : 1 product : solute carrier family 10 (sodium/bile acid cotransporter family), member 7 protein_id : NP_084012.1

name	Lsm6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865835 GeneID:78651 MGI:1925901
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0046982 - protein heterodimerization activity [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006402 - mRNA catabolism [Evidence ISS]; GO:0016071 - mRNA metabolism [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 product : LSM6 homolog, U6 small nuclear RNA associated protein_id : NP_084421.1

name	EG666340 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383687 GeneID:666340 MGI:3643693
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988245.1

name	D630040G17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124358944 GeneID:622675 MGI:2444807
definition	codon_start : 1 product : hypothetical protein LOC622675 protein_id : NP_839998.2

name	1700011L22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20885420 GeneID:67687 MGI:1914937
definition	codon_start : 1 product : hypothetical protein LOC67687 isoform 1 protein_id : XP_134463.1

name	Mmaa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541923 CCDS:CCDS22436.1 GeneID:109136 MGI:1923805
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] codon_start : 1 product : methylmalonic aciduria type A protein_id : NP_598584.2

name	A630049P17 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258946 GeneID:234479
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472824.1

name	Smad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543220 CCDS:CCDS22437.1 GeneID:17125 MGI:109452
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] [Evidence ISS]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005057 - receptor signaling protein activity [Evidence ISS]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0030509 - BMP signaling pathway [Evidence IMP] [Evidence ISS] [Evidence TAS]; GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence ISS]; GO:0007276 - gametogenesis [Evidence IMP]; GO:0030902 - hindbrain development [Evidence IMP]; GO:0042592 - homeostasis [Evidence IMP]; GO:0000165 - MAPKKK cascade [Evidence IMP]; GO:0030901 - midbrain development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] codon_start : 1 note : Smad 1 product : MAD homolog 1 protein_id : NP_032565.2

name	Otud4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487191 GeneID:73945 MGI:1098801
definition	codon_start : 1 product : HIV-1 induced protein HIN-1 protein_id : NP_001074633.1

name	Abce1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205431 CCDS:CCDS22438.1 GeneID:24015 MGI:1195458
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) inhibitor; RNS4l (Eye) product : ATP-binding cassette, subfamily E, member 1 protein_id : NP_056566.2

name	Anapc10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:35900980 CCDS:CCDS22439.1 GeneID:68999 MGI:1916249
definition	GO_component : GO:0005680 - anaphase-promoting complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0030071 - regulation of mitotic metaphase/anaphase transition [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : anaphase-promoting complex subunit 10 protein_id : NP_081180.1

name	Hhip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328503 CCDS:CCDS22440.1 GeneID:15245 MGI:1341847
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IGI]; GO:0030324 - lung development [Evidence IMP]; GO:0045879 - negative regulation of smoothened signaling pathway [Evidence IDA]; GO:0007405 - neuroblast proliferation [Evidence IGI]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0040036 - regulation of fibroblast growth factor receptor signaling pathway [Evidence IMP]; GO:0007165 - signal transduction [Evidence IDA]; GO:0007224 - smoothened signaling pathway [Evidence IMP] codon_start : 1 exception : mismatches in translation note : hedgehog-interacting product : Hedgehog-interacting protein protein_id : NP_064655.3

name	Gypa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185918 GeneID:14934 MGI:95880
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0007016 - cytoskeletal anchoring [Evidence IMP]; GO:0047484 - regulation of response to osmotic stress [Evidence IMP] codon_start : 1 product : glycophorin A protein_id : NP_034499.3

name	LOC100039466 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039466
definition	number : 1 pseudo : _no_value

name	EG666346 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666346
definition	number : 3 pseudo : _no_value

name	EG666346 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666346
definition	number : 2 pseudo : _no_value

name	EG666346 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666346
definition	number : 1 pseudo : _no_value

name	LOC666378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666378
definition	number : 1 pseudo : _no_value

name	LOC666388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666388
definition	number : 3 pseudo : _no_value

name	LOC666388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666388
definition	number : 2 pseudo : _no_value

name	LOC666388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666388
definition	number : 1 pseudo : _no_value

name	LOC666392 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666392
definition	number : 1 pseudo : _no_value

name	LOC100039439 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039439
definition	number : 2 pseudo : _no_value

name	LOC100039439 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039439
definition	number : 1 pseudo : _no_value

name	LOC546075 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258956 GeneID:546075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 97 ESTs, 4 Proteins product : similar to erythropoietin 4 immediate early response pseudo : _no_value transcript_id : XR_031274.1

clone name	MSMg01-388N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531M04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-448H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332D14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-442P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-344L20.b	B6Ng01-344L20.g
ACC	GA127147	GA127148
length	1,164	964
definition	B6Ng01-344L20.b	B6Ng01-344L20.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(81,908,018 - 81,909,195)	(82,032,235 - 82,033,191)
sequence	gaattctcttattaagcagtttggctaaaaggatcaaaaattcaattttt caaaatggtatcctattataaaaaagtaagtttgtttcctattaaatcct ctttctgtcaatagttcatgacgaccaagattctcagcacacacaattat taccaggaaaagaggggaaaatggtctcaattatctggacgtcttcacag caaactgtctctgcctcttctctagagtaaacctgtgaactgggcacact aactgtagggatgagctctagagagcccctgaaacggcgagagagcagcc acagccccctctccttctcccactcccactgaatcaacgagagccccgtg tcaaccttccagacgcctacgaacagatcgtcacatgtagtcgcttcagg ggagaagccagagtggtagcttttgtcccatcagtaagctatccatccta agagctaacaaaggtcacttttcactgtatttagaaaaaccaagctttag atatatgcgcgcacagacctttctgcctccgatttaagtccagtcctacc cagtaagccccgtaaaacttaccgatcagaaagtcccaacgccatgctct caggaaggctgggaatccccagttcctgctcaattactggacggtcttag tgcccactaatccataactgagcagatccttaaagggctcgccactggcc caaaagcacagaagaaagaaaacaagactcaagagacttcccattatcac ggcttgcacagaaagtacggtggagactggcacggggcacttttctaggc tatttatctacccagtaacacgcacatgcaaggggaaggagaatagccaa tgctgtcattttctttgtggccactacctctcctctgcctcctaagctgt gggtcccttacaatggaaatctgaatgagggggaggaatcctcaccagcc agacaccaaatcccttcatcccagtgggaatcctaggagtctgcattact ttagagtctgtgtaactaaaacttgagcgccctgcgacctgtgggccaag ggagctagcaagctccctgcttcctgacgacaccccccacccttccccga gaacagtttctctgtatagccctgcctgtctggaacctcatatgaaccag gctgcctcgaactc	gaattctactgagttccttccttcctccttttttttttctttgctccttc catccctccttcttttgagacagggtctccttatataacccaggctggct ttgaactccctctgtattccagggtagtcttgagttcctgcctctgcttc ctaagtgccgggattttgagcaggaattaccacacctggtactccagtga agtctaaatccaaattctttccacttcatccagtggactctagacattct cttcttacttcagtcagacaatgttaaggtatttgtctgatacccatata cacaaaatgaatacgtagttcctctgtatgatcacaatagtcactattag ttctcagacctgttacttatctattgccataagcatggtctgaaacactg gggcctttactgtctcccaggctgtgtgagtagaaatgccaggatttcag gagtggctcattgggttgtccccgctcaagctccctcattcccccatagg caggctgttgctggggtctgcaggcatctagcacagatggaagatctact tccaaaatgacactggtatggttcttggcaggagcctggatatatctcac ttcagaagccggtttattggcactttgcttgcatgccacccaaagatatc taagaatttgtggccagataataacagcttcctgccttgagcaatttctc cctttccaacttcccttccacagactagtggctcccagtctcctttctct ttcgacttgcctctcaaagggagacatgcagcaggggaaggaattttttt tttttttttttggttcttcgagacagggatttcctctggtgtagtctggc tggtcctggaactcgctcttgtagaccaggctgggcctcgacttcagaaa ttctgcctgcccttctgccagaaaggatatttttacccggccccttttgc ccatgacaatcagg
quality values	Open. Hide. 62 47 31 39 62 62 62 62 62 47 56 62 59 59 59 59 62 59 59 62 62 62 62 54 59 59 62 62 51 56 50 42 29 19 27 28 28 32 50 62 59 62 59 59 62 62 62 62 62 62 59 49 62 62 62 59 62 59 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 56 42 38 62 62 62 62 62 62 62 62 62 59 59 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 42 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 58 58 58 58 46 40 58 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 54 58 46 47 58 58 54 54 45 54 58 58 58 58 58 58 58 54 42 58 58 54 41 51 46 58 58 58 58 58 51 51 58 58 58 58 51 53 51 58 51 54 54 58 58 51 53 39 58 54 54 48 37 54 58 58 49 50 58 58 51 58 58 58 53 51 58 58 48 58 53 53 58 46 41 58 58 51 51 50 58 48 49 46 54 58 51 26 58 54 53 51 37 51 51 58 52 50 58 49 39 58 58 50 58 53 53 53 51 50 58 38 41 51 39 51 51 31 53 54 50 52 52 52 52 52 50 54 54 41 54 54 54 38 54 51 54 50 33 15 21 25 35 24 32 49 35 42 41 51 22 39 27 44 54 35 17 26 26 41 46 39 47 40 37 47 46 54 37 53 51 47 45 32 41 45 42 53 54 33 33 39 42 31 47 49 32 47 45 46 28 32 25 31 33 40 32 32 32 30 47 46 46 36 32 40 53 49 49 52 37 32 32 19 47 32 30 30 34 51 51 30 32 40 31 35 31 41 41 36 42 42 45 31 30 31 42 31 31 31 42 31 37 31 42 33 43 46 51 46 41 42 34 11 46 42 32 46 42 36 33 9 7 46 17 23 32 36 31 35 43 31 36 32 32 48 48 26 31 32 47 37 41 33 31 37 29 37 26 31 30 26 31 27 39 43 43 36 34 31 26 30 32 26 21 26 25 32 31 37 25 19 31 31 30 26 36 48 35 27 24 41 15 25 20 35 33 19 22 27 33 25 5 41 33 32 32 33 22 27 31 31 32 18 17 32 47 44 33 38 32 37 25 22 31 25 33 24 16 28 8 16 15 24 25 19 23 27 25 13 22 22 10 13 43 18 20 10 48 33 34 30 31 24 25 27 32 18 15 12 11 32 48 20 19 12 30 15 18 31 33 16 10 17 17 9 14 12 17 21 24 26 23 24 20 22 38 18 16 16 28 24 27 27 27 28 12 12 18 16 17 24 21 21 30 34 13 6 4 10 11 14 5 11 11 10 32 18 10 15 7 7 4 6 14 26 20 10 13 21 16 4 10 12 10 16 47 13 14 8 18 20 10 23 16 14 9 24 8 11 6 19 17 4 6 18 15 15 8 14 15 8 20 4 7 24 7 24 16 21 22 26 22 15 13 17 9 17 6 6 22 25 27 9 11 3 5 15 4 6 3 4 4 14 17 9 5 4 16 11 5 5 15 13 8 17 28 10 6 4 2 3 6 6 11 14 4 10 8 8 14 4 6 4 6 2 3 2 1 4 6 4 11 6 15 4 7 3 6 11 4 18 6 9 4 14 8 7 6 4	Open. Hide. 62 54 47 39 62 62 62 62 62 62 62 43 43 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 56 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 56 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 59 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 59 59 59 62 62 62 62 62 62 59 54 54 62 62 62 62 59 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 51 56 50 56 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 59 62 62 56 56 59 56 59 59 62 62 62 62 59 62 62 62 59 59 62 62 59 62 62 62 59 59 59 59 62 62 56 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 56 47 56 62 62 62 62 62 62 56 56 56 62 47 47 56 56 62 62 54 62 62 56 62 62 62 62 56 44 24 62 56 51 50 56 51 47 62 51 51 54 54 51 54 56 56 56 56 56 62 56 56 56 39 62 62 42 56 62 62 62 42 62 56 56 42 62 62 56 46 43 47 62 62 56 62 56 62 62 56 46 42 56 62 56 36 43 56 56 33 38 47 47 43 42 56 56 62 46 38 33 62 33 62 35 38 62 52 62 48 62 54 22 62 43 43 45 37 41 41 33 53 52 52 43 38 43 62 39 39 62 38 52 35 50 39 41 39 42 28 12 4 5 4 6 8 35 35 25 54 50 42 58 52 26 39 25 34 39 52 46 23 54 35 42 49 35 39 39 32 46 29 54 35 39 42 34 42 58 52 47 37 15 54 52 50 34 50 46 42 29 34 19 54 13 17 35 37 39 58 19 22 24 42 26 42 18 24 44 50 54 41 51 41 28 54 25 16 58 19 50 23 34 25 34 35 41 36 36 23 50 42 20 58 47 37 25 30 9 27 10 10 5 4 4 7 9 5 5 12 5 9 10 9 8 6 12 6 7 5 9 14 22 31 29 10 35 14 11 36 15 24 13 10 14 40 31 34 18 52 29 12 6 11 21 23 15 10 10 31 26 39 19 15 22 14 16 13 10 16 12 7 13 21 32 14 21 28 32 21 17 19 28 11 23 16 19 14 6 12 10 27 11 49 31 23 28 19 28 26 20 13 54 31 20 13 12 34 12 25 13 10 20 12 14 18 32 52 18 10 14 12 6 17 27 30 29 22 12 40 31 10 6 9 9 9 25 10 6 6 14 40 12 27 19 33 10 25 20 32 32 28 30 8 21 32 23 14 31 17 46 46 42 28 51 45 19 18 10 31 26 15 20 39 32 15 8 10 12 20 16 25 29

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_81908018_81909195
seq2: B6Ng01-344L20.b_49_1212

seq1  GAATTCTCTTATTAAGCAGTTTGGCTAAAAGGATCAAAAATTCAATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTATTAAGCAGTTTGGCTAAAAGGATCAAAAATTCAATTTTT  50

seq1  CAAAATGGTATCCTATTATAAAAAAGTAAGTTTGTTTCCTATTAAATCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGGTATCCTATTATAAAAAAGTAAGTTTGTTTCCTATTAAATCCT  100

seq1  CTTTCTGTCAATAGTTCATGACGACCAAGATTCTCAGCACACACAATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTCAATAGTTCATGACGACCAAGATTCTCAGCACACACAATTAT  150

seq1  TACCAGGAAAAGAGGGGAAAATGGTCTCAATTATCTGGACGTCTTCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGAAAAGAGGGGAAAATGGTCTCAATTATCTGGACGTCTTCACAG  200

seq1  CAAACTGTCTCTGCCTCTTCTCTAGAGTAAACCTGTGAACTGGGCACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGTCTCTGCCTCTTCTCTAGAGTAAACCTGTGAACTGGGCACACT  250

seq1  AACTGTAGGGATGAGCTCTAGAGAGCCCCTGAAACGGCGAGAGAGCAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAGGGATGAGCTCTAGAGAGCCCCTGAAACGGCGAGAGAGCAGCC  300

seq1  ACAGCCCCCTCTCCTTCTCCCACTCCCACTGAATCAACGAGAGCCCCGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCCCTCTCCTTCTCCCACTCCCACTGAATCAACGAGAGCCCCGTG  350

seq1  TCAACCTTCCAGACGCCTACGAACAGATCGTCACATGTAGTCGCTTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTTCCAGACGCCTACGAACAGATCGTCACATGTAGTCGCTTCAGG  400

seq1  GGAGAAGCCAGAGTGGTAGCTTTTGTCCCATCAGTAAGCTATCCATCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCCAGAGTGGTAGCTTTTGTCCCATCAGTAAGCTATCCATCCTA  450

seq1  AGAGCTAACAAAGGTCACTTTTCACTGTATTTAGAAAAACCAAGCTTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAACAAAGGTCACTTTTCACTGTATTTAGAAAAACCAAGCTTTAG  500

seq1  ATATATGCGCGCACAGACCTTTCTGCCTCCGATTTAAGTCCAGTCCTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGCGCGCACAGACCTTTCTGCCTCCGATTTAAGTCCAGTCCTACC  550

seq1  CAGTAAGCCCCGTAAAACTTACCGATCAGAAAGTCCCAACGCCATGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGCCCCGTAAAACTTACCGATCAGAAAGTCCCAACGCCATGCTCT  600

seq1  CAGGAAGGCTGGGAATCCCCAGTTCCTGCTCAATTACTGGACGGTCTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGGCTGGGAATCCCCAGTTCCTGCTCAATTACTGGACGGTCTTAG  650

seq1  TGCCCACTAATCCATAACTGAGCAGATCCTTAAAGGGCTCGCCACTGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACTAATCCATAACTGAGCAGATCCTTAAAGGGCTCGCCACTGGCC  700

seq1  CAAAAGCACAGAAGAAAGAAAACAAGACTCAAGAGACTTCCCATTATCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCACAGAAGAAAGAAAACAAGACTCAAGAGACTTCCCATTATCAC  750

seq1  GGCTTGCACAGAAAGTACGGTGGAGACTGGCACGGGGCACTTTTCTAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCACAGAAAGTACGGTGGAGACTGGCACGGGGCACTTTTCTAGGC  800

seq1  TATTTATCTACCCAGTAACACGCACATGCAAGGGGAAGGAGAATAGCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCTACCCAGTAACACGCACATGCAAGGGGAAGGAGAATAGCCAA  850

seq1  TGCTGTCATTTTCTTTGTGGCCACTACCTCTCCTCTGCCTCCTAAGCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCATTTTCTTTGTGGCCACTACCTCTCCTCTGCCTCCTAAGCTGT  900

seq1  GGGTCCCTTACAATGGAAATCTGAATGAGGGGGAGGAATCCTCAACCAGC  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGGTCCCTTACAATGGAAATCTGAATGAGGGGGAGGAATCCTC-ACCAGC  949

seq1  CAGACACCAAATCCCTTCATCCCAGTGGGAATCCTAGGAGGTCTGCATTA  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGACACCAAATCCCTTCATCCCAGTGGGAATCCTAGGA-GTCTGCATTA  998

seq1  CTTTAGAGTCTGTGTAACTAAAACCTGAGCGCCCTGCGGACCTGTGGGCC  1050
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  CTTTAGAGTCTGTGTAACTAAAACTTGAGCGCCCTGC-GACCTGTGGGCC  1047

seq1  AAGGGAGCTAGGCAAGGCTCCCTGCTTCCTGAACGACAACCCCCCACCCC  1100
      |||||||||| |||| ||||||||||||||| ||||| ||||||||||| 
seq2  AAGGGAGCTA-GCAA-GCTCCCTGCTTCCTG-ACGAC-ACCCCCCACCCT  1093

seq1  TCCCCCGGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAA-CTC  1149
      |||||  |||| |  ||||||||||||||||||| |||| |||||| |||
seq2  TCCCC--GAGA-ACAGTTTCTCTGTATAGCCCTGCCTGT-CTGGAACCTC  1139

seq1  ACTTTATAGACCAGGCTGGCCTCGAACTC  1178
      |   |||  |||||||| |||||||||||
seq2  A---TATGAACCAGGCT-GCCTCGAACTC  1164

seq1: chr8_82032235_82033191
seq2: B6Ng01-344L20.g_70_1033 (reverse)

seq1  CCTGA-TGTCATGG--CAAAGGGGCCGGGTAAAAATATTCCTTCTGGCAG  47
      ||||| ||||||||   ||||||||||||||||||||| | |||||||||
seq2  CCTGATTGTCATGGGCAAAAGGGGCCGGGTAAAAATATCCTTTCTGGCAG  50

seq1  A--GGCAGGCAG-ATTTCTGAGTTCGAGG-CCAGCCTGGTCTAC-AGAGC  92
      |  ||||||||| ||||||||  |||||| |||||||||||||| |||||
seq2  AAGGGCAGGCAGAATTTCTGAAGTCGAGGCCCAGCCTGGTCTACAAGAGC  100

seq1  GAGTTCCAGGA-CAGCCAGGACTACA-CAGA-GAAAT-CCTGTCTCGAAG  138
      ||||||||||| |||||| ||||||| |||| ||||| ||||||||||||
seq2  GAGTTCCAGGACCAGCCA-GACTACACCAGAGGAAATCCCTGTCTCGAAG  149

seq1  AACCAAAAAAAAAAAAAAAAAAAAAAATTCCTTCCCCTGCTGCATGTCTC  188
      ||||     |||||||||||||||||||||||||||||||||||||||||
seq2  AACC-----AAAAAAAAAAAAAAAAAATTCCTTCCCCTGCTGCATGTCTC  194

seq1  CCTTTGAGAGGCAAGTCGAAAGAG-AAGGAGACTGGGAGCCACTAGTCTG  237
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCTTTGAGAGGCAAGTCGAAAGAGAAAGGAGACTGGGAGCCACTAGTCTG  244

seq1  TGGAAGGGAAGTTGGAAAGGGAGAAGATGCTCAAGGCAGGAAGCTGTTAT  287
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  TGGAAGGGAAGTTGGAAAGGGAGAAATTGCTCAAGGCAGGAAGCTGTTAT  294

seq1  TATCTGGCCACAAATTCTTAGATATCTTTGGGTGGCATGCAAGCAAAGTG  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCCACAAATTCTTAGATATCTTTGGGTGGCATGCAAGCAAAGTG  344

seq1  CCAATAAACCGGCTTCTGAAGTGAGATATATCCAGGCTCCTGCCAAGAAC  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAACCGGCTTCTGAAGTGAGATATATCCAGGCTCCTGCCAAGAAC  394

seq1  CATACCAGTGTCATTTTGGAAGTAGATCTTCCATCTGTGCTAGATGCCTG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAGTGTCATTTTGGAAGTAGATCTTCCATCTGTGCTAGATGCCTG  444

seq1  CAGACCCCAGCAACAGCCTGCCTATGGGGGAATGAGGGAGCTTGAGCGGG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCCAGCAACAGCCTGCCTATGGGGGAATGAGGGAGCTTGAGCGGG  494

seq1  GACAACCCAATGAGCCACTCCTGAAATCCTGGCATTTCTACTCACACAGC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCCAATGAGCCACTCCTGAAATCCTGGCATTTCTACTCACACAGC  544

seq1  CTGGGAGACAGTAAAGGCCCCAGTGTTTCAGACCATGCTTATGGCAATAG  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGACAGTAAAGGCCCCAGTGTTTCAGACCATGCTTATGGCAATAG  594

seq1  ATAAGTAACAGGTCTGAGAACTAATAGTGACTATTGTGATCATACAGAGG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAACAGGTCTGAGAACTAATAGTGACTATTGTGATCATACAGAGG  644

seq1  AACTACGTATTCATTTTGTGTATATGGGTATCAGACAAATACCTTAACAT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACGTATTCATTTTGTGTATATGGGTATCAGACAAATACCTTAACAT  694

seq1  TGTCTGACTGAAGTAAGAAGAGAATGTCTAGAGTCCACTGGATGAAGTGG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGACTGAAGTAAGAAGAGAATGTCTAGAGTCCACTGGATGAAGTGG  744

seq1  AAAGAATTTGGATTTAGACTTCACTGGAGTACCAGGTGTGGTAATTCCTG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTTGGATTTAGACTTCACTGGAGTACCAGGTGTGGTAATTCCTG  794

seq1  CTCAAAATCCCGGCACTTAGGAAGCAGAGGCAGGAACTCAAGACTACCCT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATCCCGGCACTTAGGAAGCAGAGGCAGGAACTCAAGACTACCCT  844

seq1  GGAATACAGAGGGAGTTCAAAGCCAGCCTGGGTTATATAAGGAGACCCTG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACAGAGGGAGTTCAAAGCCAGCCTGGGTTATATAAGGAGACCCTG  894

seq1  TCTCAAAAGAAGGAGGGATGGAAGGAGCAAAGAAAAAAAAAAGGAGGAAG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAAGAAGGAGGGATGGAAGGAGCAAAGAAAAAAAAAAGGAGGAAG  944

seq1  GAAGGAACTCAGTAGAATTC  957
      ||||||||||||||||||||
seq2  GAAGGAACTCAGTAGAATTC  964

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information