BAC Information

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BAC

Clone NameB6Ng01-345B08
Chromosome8 (Build37)
Map Location 31,237,769 - 31,361,568
singlet/doubletdoublet
Overlap geneEG628189
Upstream geneUnc5d, LOC100041237
Downstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-345B08.bB6Ng01-345B08.g
ACCGA127394GA127395
length1,0521,047
definitionB6Ng01-345B08.b B6Ng01-345B08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,237,769 - 31,238,823)(31,360,522 - 31,361,568)
sequence
gaattctatttaatgtgtgtctgtgtcaggcaggatatgtccctgtgagt
gaagatgcctgaagaatctagaaattcttagatcccctggatctggaaat
agaggcagctgtgagccacccaaccttggtcctagaaagaaaactcttat
tttgtctcatgtgtgggggttaactttgaatctgcagatatgtatcaggt
ttttgtttagttggttggtttttgtttctttgtttgtttttgtttttatt
ttctgtccttttgtttttgctttgtttgtttttgcttttttgtttgtttg
ttttgttttgttttgttttgtttttgagtaaccatgaaagtcagatattt
cccaagggaattagaggaatgtcttttaagagagagatgttataatacac
tgctagaaagattagaaggggataacagaacaggaaatgttaagttggta
gggcaaaaggatagcaggagaagaagaggggattcggggagtggtgaata
acacaaaaagaatttggaaaagctaattaaaacccactagcttaaaaact
ttctaaactacacataaacatttgcattgacctataacagggtaacaata
cccctcttagccaccacagagatgattgcagcatcattatgaagtaagat
ccatccccagtttgcaggcaaggagcatgagtcagagagaagcaatgctt
cctgcattctttaaggggtggttgagcaggaaatcaaaaccagaccctag
attctgaatctcctgttgctcggtgagatagcatgtgagaaaaatagcga
taaagaagagaaagaaattgtttagttgtattgaacactttactatggtc
cagagagattgccattgtgtttaattgtcagaatgatatatcaaataact
attacttcattataatttgtgagagaagatagagtcaatggttacagata
taatctttaacctcaagaaacatttttaataaaaaaatttggggggaaga
aaaaaacaaatagtagcccattgcagaaataggtttactcttcttgatca
tg

gaattcatctgacgcaacagtgtgcttaaactctttctaagataattcac
actgccctagctgaaaccattttttccacaattccataataataatctga
cagaatgaaagtggtttctgaattgcaaacctgcttaaatcactttatat
cttccttcagtacctcttcccatagcccccaggataaaaatccaaaattc
ttgagctaaggccacagggccatgtgtgacccatcacctgattgtttcca
gagttcctttcatttatcctcacccaatctgtcagcctcttaaggtttct
taaatgtgttgtgcttctcacttgtcagtaaagctagctctgagcataaa
ggttgctggattcaattttcgtctatctccttatcttccacaggcagcta
tagatcatctctccttagcacatctactcccacagtgacctcctcattta
gatgcttctactgtggtaccttagaaaccacagattccttctattttgat
agcaacgtgagttttaaattgactacttatttaagtgccttccttaaaac
acactggcctctaggcaggcaggagttttcatatatctctttatttagaa
agcccacaaaatatgttctgttttctgctgaatcaataggtgtatcaggc
aatgtactgaataatttggacttcagtttagaaaacttaatcttgcatca
gtgaagatgggttaggtgagaagatatagtgaagggagggaccaggatga
ggtgaagaagacagggtcagaagtattttgtattgaccagtaatcactat
tgaccccatgaaaattcctctgaatgaattagtgtgtgaatggatgtggt
tatttatgtatatacatgcatgggcagaggggtatgagatggcatgtaga
ggcagagacaggaggtcattttcaatctcaggtagagttccccaggagtc
actaaactttttagtaacaaagagtttcttactgggcctggacttctctg
attcagctggctggctggccataagccttgtatctgccttatatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_31237769_31238823
seq2: B6Ng01-345B08.b_47_1098

seq1  GAATTCTATTTAATGTGTGTCTGTGTCAGGCAGGATATGTCCCTGTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTAATGTGTGTCTGTGTCAGGCAGGATATGTCCCTGTGAGT  50

seq1  GAAGATGCCTGAAGAATCTAGAAATTCTTAGATCCCCTGGATCTGGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGCCTGAAGAATCTAGAAATTCTTAGATCCCCTGGATCTGGAAAT  100

seq1  AGAGGCAGCTGTGAGCCACCCAACCTTGGTCCTAGAAAGAAAACTCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGCTGTGAGCCACCCAACCTTGGTCCTAGAAAGAAAACTCTTAT  150

seq1  TTTGTCTCATGTGTGGGGGTTAACTTTGAATCTGCAGATATGTATCAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCATGTGTGGGGGTTAACTTTGAATCTGCAGATATGTATCAGGT  200

seq1  TTTTGTTTAGTTGGTTGGTTTTTGTTTCTTTGTTTGTTTTTGTTTTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTAGTTGGTTGGTTTTTGTTTCTTTGTTTGTTTTTGTTTTTATT  250

seq1  TTCTGTCCTTTTGTTTTTGCTTTGTTTGTTTTTGCTTTTTTGTTTGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCTTTTGTTTTTGCTTTGTTTGTTTTTGCTTTTTTGTTTGTTTG  300

seq1  TTTTGTTTTGTTTTGTTTTGTTTTTGAGTAACCATGAAAGTCAGATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTGTTTTGTTTTTGAGTAACCATGAAAGTCAGATATTT  350

seq1  CCCAAGGGAATTAGAGGAATGTCTTTTAAGAGAGAGATGTTATAATACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGGAATTAGAGGAATGTCTTTTAAGAGAGAGATGTTATAATACAC  400

seq1  TGCTAGAAAGATTAGAAGGGGATAACAGAACAGGAAATGTTAAGTTGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAAAGATTAGAAGGGGATAACAGAACAGGAAATGTTAAGTTGGTA  450

seq1  GGGCAAAAGGATAGCAGGAGAAGAAGAGGGGATTCGGGGAGTGGTGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAAAGGATAGCAGGAGAAGAAGAGGGGATTCGGGGAGTGGTGAATA  500

seq1  ACACAAAAAGAATTTGGAAAAGCTAATTAAAACCCACTAGCTTAAAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAAAGAATTTGGAAAAGCTAATTAAAACCCACTAGCTTAAAAACT  550

seq1  TTCTAAACTACACATAAACATTTGCATTGACCTATAACAGGGTAACAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAACTACACATAAACATTTGCATTGACCTATAACAGGGTAACAATA  600

seq1  CCCCTCTTAGCCACCACAGAGATGATTGCAGCATCATTATGAAGTAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTTAGCCACCACAGAGATGATTGCAGCATCATTATGAAGTAAGAT  650

seq1  CCATCCCCAGTTTGCAGGCAAGGAGCATGAGTCAGAGAGAAGCAATGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCCAGTTTGCAGGCAAGGAGCATGAGTCAGAGAGAAGCAATGCTT  700

seq1  CCTGCATTCTTTAAGGGGTGGTTGAGCAGGAAATCAAAACCAGACCCTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATTCTTTAAGGGGTGGTTGAGCAGGAAATCAAAACCAGACCCTAG  750

seq1  ATTCTGAATCTCCTGTTGCTCGGTGAGATAGCATGTGAGAAAAATAGCGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAATCTCCTGTTGCTCGGTGAGATAGCATGTGAGAAAAATAGCGA  800

seq1  TAAAGAAGAGAAAGAAATTGTTTAGTTGTATTGAACACTTTACTATGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGAGAAAGAAATTGTTTAGTTGTATTGAACACTTTACTATGGTC  850

seq1  CAGAGAGATTGCCATTGTGTTTAATTGTCAGAATGATATATCAAATAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGATTGCCATTGTGTTTAATTGTCAGAATGATATATCAAATAACT  900

seq1  ATTACTTCATTATAA-TTGTGAGAGAAGATAGAGTCAATGGTTACAGATA  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATTACTTCATTATAATTTGTGAGAGAAGATAGAGTCAATGGTTACAGATA  950

seq1  TAATCTTTAACCCTCAAGAAACATTTTTAATAAAAAAATTTTGGGGGAAG  999
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  TAATCTTTAA-CCTCAAGAAACATTTTTAATAAAAAAATTTGGGGGGAAG  999

seq1  AAAAAAACAAATAAGTAGCCCAATGCAAGAAATAGTTTACCTCTTCTGGA  1049
      |||||||||||| ||||||||| ||| |||||||| ||  ||||||| | 
seq2  AAAAAAACAAAT-AGTAGCCCATTGC-AGAAATAGGTTTACTCTTCTTG-  1046

seq1  ATCATG  1055
      ||||||
seq2  ATCATG  1052


seq1: chr8_31360522_31361568
seq2: B6Ng01-345B08.g_65_1111 (reverse)

seq1  GAGATAT-AGGCAGATTCCAGGGCTTATGGCCAGCCAGCCCAGCTGAATC  49
      ||||||| ||||||| | || ||||||||||||||||| |||||||||||
seq2  GAGATATAAGGCAGA-TACAAGGCTTATGGCCAGCCAG-CCAGCTGAATC  48

seq1  AGAGAGTTCCAGG-CCAGTAAGAAACTCTTTGTTACTAAAAAAGTTTAGT  98
      |||||  |||||| ||||||||||||||||||||||| ||||||||||||
seq2  AGAGAAGTCCAGGCCCAGTAAGAAACTCTTTGTTACT-AAAAAGTTTAGT  97

seq1  GACTCCTGGGGAACTCTACCTGAGATTG-AAATGACCTCCTGTCTCTGCC  147
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GACTCCTGGGGAACTCTACCTGAGATTGAAAATGACCTCCTGTCTCTGCC  147

seq1  TCTACATGCCATCTCATACCCCTCTGCCCATGCATGTATATACATAAATA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATGCCATCTCATACCCCTCTGCCCATGCATGTATATACATAAATA  197

seq1  ACCACATCCATTCACACACTAATTCATTCAGAGGAATTTTCATGGGGTCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATCCATTCACACACTAATTCATTCAGAGGAATTTTCATGGGGTCA  247

seq1  ATAGTGATTACTGGTCAATACAAAATACTTCTGACCCTGTCTTCTTCACC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGATTACTGGTCAATACAAAATACTTCTGACCCTGTCTTCTTCACC  297

seq1  TCATCCTGGTCCCTCCCTTCACTATATCTTCTCACCTAACCCATCTTCAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTGGTCCCTCCCTTCACTATATCTTCTCACCTAACCCATCTTCAC  347

seq1  TGATGCAAGATTAAGTTTTCTAAACTGAAGTCCAAATTATTCAGTACATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCAAGATTAAGTTTTCTAAACTGAAGTCCAAATTATTCAGTACATT  397

seq1  GCCTGATACACCTATTGATTCAGCAGAAAACAGAACATATTTTGTGGGCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGATACACCTATTGATTCAGCAGAAAACAGAACATATTTTGTGGGCT  447

seq1  TTCTAAATAAAGAGATATATGAAAACTCCTGCCTGCCTAGAGGCCAGTGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAATAAAGAGATATATGAAAACTCCTGCCTGCCTAGAGGCCAGTGT  497

seq1  GTTTTAAGGAAGGCACTTAAATAAGTAGTCAATTTAAAACTCACGTTGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAGGAAGGCACTTAAATAAGTAGTCAATTTAAAACTCACGTTGCT  547

seq1  ATCAAAATAGAAGGAATCTGTGGTTTCTAAGGTACCACAGTAGAAGCATC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATAGAAGGAATCTGTGGTTTCTAAGGTACCACAGTAGAAGCATC  597

seq1  TAAATGAGGAGGTCACTGTGGGAGTAGATGTGCTAAGGAGAGATGATCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGGAGGTCACTGTGGGAGTAGATGTGCTAAGGAGAGATGATCTA  647

seq1  TAGCTGCCTGTGGAAGATAAGGAGATAGACGAAAATTGAATCCAGCAACC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCCTGTGGAAGATAAGGAGATAGACGAAAATTGAATCCAGCAACC  697

seq1  TTTATGCTCAGAGCTAGCTTTACTGACAAGTGAGAAGCACAACACATTTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCTCAGAGCTAGCTTTACTGACAAGTGAGAAGCACAACACATTTA  747

seq1  AGAAACCTTAAGAGGCTGACAGATTGGGTGAGGATAAATGAAAGGAACTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTTAAGAGGCTGACAGATTGGGTGAGGATAAATGAAAGGAACTC  797

seq1  TGGAAACAATCAGGTGATGGGTCACACATGGCCCTGTGGCCTTAGCTCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACAATCAGGTGATGGGTCACACATGGCCCTGTGGCCTTAGCTCAA  847

seq1  GAATTTTGGATTTTTATCCTGGGGGCTATGGGAAGAGGTACTGAAGGAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGGATTTTTATCCTGGGGGCTATGGGAAGAGGTACTGAAGGAAG  897

seq1  ATATAAAGTGATTTAAGCAGGTTTGCAATTCAGAAACCACTTTCATTCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGTGATTTAAGCAGGTTTGCAATTCAGAAACCACTTTCATTCTG  947

seq1  TCAGATTATTATTATGGAATTGTGGAAAAAATGGTTTCAGCTAGGGCAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTATTATTATGGAATTGTGGAAAAAATGGTTTCAGCTAGGGCAGT  997

seq1  GTGAATTATCTTAGAAAGAGTTTAAGCACACTGTTGCGTCAGATGAATTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTATCTTAGAAAGAGTTTAAGCACACTGTTGCGTCAGATGAATTC  1047


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