BAC Information

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BAC

Clone NameB6Ng01-346I05
Chromosome8 (Build37)
Map Location 65,156,336 - 65,157,471
singlet/doubletsinglet
Overlap genenone
Upstream genePalld, BC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
Downstream geneSpock3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-346I05.bB6Ng01-346I05.g
ACCGA128389GA128390
length1,2691,123
definitionB6Ng01-346I05.b B6Ng01-346I05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatctgcttcagagctactaagagctggcttcctgagctcat
ctagtgacgagtatctcctagagacctccgctaatcgatcttttttcttt
tcttttttcttttccttccttctaatctctccccaggtattcttacctga
cctaaacttttcctcgggttcaagacccttggaaaggcctgtatacttat
tttgtgtaccatattttctctttgctcctactctctctccccgctttact
tctgatagattgtcctgaattttatctagaatccgccctgccttaaccac
ttgataacatgtgaaaaggaacaaaagggctcctaacaccagaaaaaatt
caaggccaaatataccttgtaaagccatttcccactttacttctgataga
ctgtcttgaatttcgttagaaagttcaagaccaggcttacctcgtaaagc
tgtactcactggtactctcgttctccagctgaaaagttctgaattcatac
agttgaatccttcttaacagtctgctttacgggaacctttattaccgcga
cccgcagttctggttctggaatgagggatcttccttgcgccagtcccgag
ttttttctcgtcccgggtttcggcaccaattgttattagacgcgttctca
cgcccggccaggaagaacaccacagaccagaatcttctgcggcaaaactt
tattgcttacatcttcaggagccagagtgtaagaagcaagagagagagaa
aacgaaaccccgtccctattaaggagaattctccttcgcctaggacgtgt
cactccctgattggctgcagcccatcggccgagttgacgtcacggggaag
gcagagcacatggagtggagaaccaccctcgacacatgcgcagattattt
gtttaccacttagaacacagctgtcagcgccatcttgtaacggcgaatgt
gggcgcggctcccaacacctaactaatcaaattcattaattgtaaactga
ttttcactatttgggagcagagtatatcatatattcctatctgaccatat
tactgatcgtcttcaaatagatatgtgaaatggaaatagaaatctcattt
ctacaaagctgtgacaacctttacctgatgaaccctacctcaagtcttta
atataaccatctttctgttcatcgatagaacataggaattccatcatgta
ctttaagctatcaagcctctcatgaacaccattatctcacgaattagctg
ccagagagaaggtacactg
gaattcataacatccattttgatgattacatatttaaatattttgcaata
caggagagaaattgtgatactattatcacaattaatcataagcagtattt
atcacaatgctatttttacaaagcaagttagcgtttgtgccacaaagaca
taaatttccatttgtccatcaccaaattaaatgtttaagatgaaactttt
ctatgcattcaagtcatttaaatataaaactaactcccaagtagcacagt
ctcatcaaagccatgtttttatcatcagattttcaatgtgttgatgcctc
tgtgatatattctctgtatttttaaatgtatatttgtgaattagacataa
agggtacaatttaacctcttccttctaccttttgtcattctctgttgaaa
atgaacagcaatacaaataagcatagtcgtcgtggaatttaatttcatgc
catgaaatagaaagtcaaataatgatttttgagagccatagggaacacta
atgagttgcctttaagtgaaactatattttcagcttgtaaagtatacata
tatctaacaggggtatgataagagaaagaagaacaaaaaaaaggtaagaa
gagccacagagtggtcggagaagtgagtagataaaattctgtgagaaggt
gacaataaaattaaaacatggatgacacaccaggtgaagagcaaggagca
gacagaggatgcagtgtcagacagaggcaggtgtcgagcgatagagtaaa
ggctcatgtgttcatcagatgaagctgatttattggagccgaggatgggg
acacagcagtaatcagtagtcagctatttttggacttaattggcatagac
ttcgcctttgatgctgagtgagacagtaaaactgcaacatgatactgagt
ccaggagcaacctgatacaactttagttttatggcatcatttttgggggg
aggaggggcagtgatggactctacagtgtcaagaagaaagactgacgatc
agagggaagttgtttgcagaggtgatctgacatgcactgtgctctgtcag
ctgaggataacagctgatacatataatacaaagagcaatgtactatgagt
gaacgggctagcttcagcaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65156336_65157471
seq2: B6Ng01-346I05.g_69_1191

seq1  GAATTCATAACATCCATTTTGATGATTACATATTTAAATATTTTGCAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAACATCCATTTTGATGATTACATATTTAAATATTTTGCAATA  50

seq1  CAGGAGAGAAATTGTGATACTATTATCACAATTAATCATAAGCAGTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAGAAATTGTGATACTATTATCACAATTAATCATAAGCAGTATTT  100

seq1  ATCACAATGCTATTTTTACAAAGCAAGTTAGCGTTTGTGCCACAAAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAATGCTATTTTTACAAAGCAAGTTAGCGTTTGTGCCACAAAGACA  150

seq1  TAAATTTCCATTTGTCCATCACCAAATTAAATGTTTAAGATGAAACTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCCATTTGTCCATCACCAAATTAAATGTTTAAGATGAAACTTTT  200

seq1  CTATGCATTCAAGTCATTTAAATATAAAACTAACTCCCAAGTAGCACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCATTCAAGTCATTTAAATATAAAACTAACTCCCAAGTAGCACAGT  250

seq1  CTCATCAAAGCCATGTTTTTATCATCAGATTTTCAATGTGTTGATGCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCAAAGCCATGTTTTTATCATCAGATTTTCAATGTGTTGATGCCTC  300

seq1  TGTGATATATTCTCTGTATTTTTAAATGTATATTTGTGAATTAGACATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATATATTCTCTGTATTTTTAAATGTATATTTGTGAATTAGACATAA  350

seq1  AGGGTACAATTTAACCTCTTCCTTCTACCTTTTGTCATTCTCTGTTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACAATTTAACCTCTTCCTTCTACCTTTTGTCATTCTCTGTTGAAA  400

seq1  ATGAACAGCAATACAAATAAGCATAGTCGTCGTGGAATTTAATTTCATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAGCAATACAAATAAGCATAGTCGTCGTGGAATTTAATTTCATGC  450

seq1  CATGAAATAGAAAGTCAAATAATGATTTTTGAGAGCCATAGGGAACACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAATAGAAAGTCAAATAATGATTTTTGAGAGCCATAGGGAACACTA  500

seq1  ATGAGTTGCCTTTAAGTGAAACTATATTTTCAGCTTGTAAAGTATACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTGCCTTTAAGTGAAACTATATTTTCAGCTTGTAAAGTATACATA  550

seq1  TATCTAACAGGGGTATGATAAGAGAAAGAAGAACAAAAAAAAGGTAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAACAGGGGTATGATAAGAGAAAGAAGAACAAAAAAAAGGTAAGAA  600

seq1  GAGCCACAGAGTGGTCGGAGAAGTGAGTAGATAAAATTCTGTGAGAAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACAGAGTGGTCGGAGAAGTGAGTAGATAAAATTCTGTGAGAAGGT  650

seq1  GACAATAAAATTAAAACATGGATGACACACCAGGTGAAGAGCAAGGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATAAAATTAAAACATGGATGACACACCAGGTGAAGAGCAAGGAGCA  700

seq1  GACAGAGGATGCAGTGTCAGACAGAGGCAGGTGTCGAGCGATAGAGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGGATGCAGTGTCAGACAGAGGCAGGTGTCGAGCGATAGAGTAAA  750

seq1  GGCTCATGTGTTCATCAGATGAAGCTGATTTATTGGAGCCGAGGATGGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATGTGTTCATCAGATGAAGCTGATTTATTGGAGCCGAGGATGGGG  800

seq1  ACACAGCAGTAATCAGTAGTCAGCTATTTTTGGACTTAATTGGCATAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCAGTAATCAGTAGTCAGCTATTTTTGGACTTAATTGGCATAGAC  850

seq1  TTCGCCTTTGATGCTGAGTGAGACAGTAAAACTGCAACATGATACTGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCCTTTGATGCTGAGTGAGACAGTAAAACTGCAACATGATACTGAGT  900

seq1  CCAGGAGCAACCTGATACAACTTTAGTTTTAATGGCATCATTTTTGGGGG  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCAGGAGCAACCTGATACAACTTTAGTTTT-ATGGCATCATTTTTGGGGG  949

seq1  GAGGAGGGGCAGTGATGGACTCTACAGTGTCAAGAAGAAAGACTTGACGA  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAGGAGGGGCAGTGATGGACTCTACAGTGTCAAGAAGAAAGAC-TGACGA  998

seq1  TCAGAGGGAAGTTGTTTGCAGAGGTGATCCTGACATGCACTGTGCTCTGT  1050
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCAGAGGGAAGTTGTTTGCAGAGGTGAT-CTGACATGCACTGTGCTCTGT  1047

seq1  CAGCTGAGGGATAACAAGCCTGGATACATATAATACAAAGAGGCAAATGT  1100
      ||||||| ||||||| |||   ||||||||||||||||||||   |||||
seq2  CAGCTGA-GGATAAC-AGC--TGATACATATAATACAAAGAG--CAATGT  1091

seq1  ACTATGAAGTGAACGGGGCTTTAGCTTCAGCAACTT  1136
      |||||| ||||||||||    |||||||||||||||
seq2  ACTATG-AGTGAACGGG---CTAGCTTCAGCAACTT  1123