BAC Information

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BAC

Clone NameB6Ng01-347D23
Chromosome8 (Build37)
Map Location 104,501,752 - 104,607,899
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneCdh11, EG667618, LOC100041368
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347D23.bB6Ng01-347D23.g
ACCGA128909GA128910
length1,177805
definitionB6Ng01-347D23.b B6Ng01-347D23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,606,719 - 104,607,899)(104,501,752 - 104,502,326)
sequence
gaattctagcattattgattatcacaggttgtataacaactcactacttt
tattattagataggagttaagtaccttattcaagtattccttcaacctca
gcctcctgagtaccctgaattgttggtgtctttgattaaacaaactagtt
acttaaactaacatgtaagaaatggaagaacaggcatctagactatacta
caaatcaacatccagtgttttctagtagacactgggcttatacagaaaga
ttggaaattaaactttagtcttgtatcccatttagcttgatttagattga
ttgattgatcaatttgtataataaactttaccagatagaattaattaaag
gatgtggtatttaataagggttcaatcttttctgaaactaatactatttt
aatgataagtactaccaagaaaaggaaagaaatatggaagctatccagat
caaaattaaataacaaatctaccttccatacactaatatgagattctgtt
tgattcagagacatgtatttctttagttgtcaaatatcagctttcaaagt
tttaaatccaatcattctgtaatcttaagtcacaatgtacatttgttgca
atctgtgacttgtgtcagtctggaaagatacgatgacaggtcgtacttag
ctaataaatccacaacttttgagtgaatgaccatgagaaatatccatctc
aaaatgcttaaggtaatgcttttatcagtagaagataaacattggagcag
tcttgctttgataatttagatcattctagtatttaagatgaaatgaaata
tttgtattttttaagagttcggcattctagatatatattatgcttggtaa
cactgaagaatgctagataccatcaatagattatgtacagaatatgtata
ttatttttcctactggttttgcctccatggaaatctgttgcttatgggtt
aatctctcatgaattctttcctataacttaggacatttcataatgtttcc
tatgaatagaaagaagtaactaggattagcgtattttcaagcccattggc
aaaattatctgtggacaaatgaaagtaatgttgcagatggcaattattgc
ctctagaagtgtgctgatttttttcatggattatttggttcatacatatc
ctgacctaaaaatgcaaagaaatttat
gaattctcagtcatttaacccagtcccattgtttttgatgggacaattgt
ggattttgtttatttatttatttattggtttgtgtgcattggtctacata
tatatgattttttaccgataccatattgtttttatttctatggctcaata
acatatcataaagtctgtaatgctaacccttccttcaatttgctcacaat
tattttggataccaggaatttttctatggttttggtttcttataaatttt
aggctaattttttttttttttttttttttttttttttacttctctaaaca
ttgagatagggattttggtttgtgctatgttaactctttaaatacttttt
gccaaatgttcatttatacaatatagcttctaccaattcaaaactatgat
ttataattctatcttctgtggtctttctttatgtttttcttcaaacattt
aaagcatccattatagattttttttccttccttggttaggtttattccta
ttcatgcttttgatgccaccattaataagagtgtgtccatgatatctttt
tctgaatgtgtattgttttacagcaaagctattgacttataaatgtccat
tctctcttgtgagactaggccggggcctagcaaacacagaagtggatgct
cacagtcagctattggatggagcacagggcccccaatggaggagctagag
aaagtatccaaggagctaaagagatctgcaaccctgtaggtgcaacatta
tgaactaaccagtaccccgggagctctttgactctagctgcatattgtat
caaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104606719_104607899
seq2: B6Ng01-347D23.b_45_1221 (reverse)

seq1  ATAAATTTCTTT-CATTTTTA-GTCAGAATATGTAGAACCCAAATATATC  48
      |||||||||||| |||||||| ||||| |||||||  | ||||||| |||
seq2  ATAAATTTCTTTGCATTTTTAGGTCAGGATATGTATGAACCAAATA-ATC  49

seq1  CATTGAAAAAAATCAAGCACACTTTCTAGAAGCAAATTAATTTCCATCTG  98
      || ||||||||||| ||||||| ||||||| ||||  ||||| |||||| 
seq2  CA-TGAAAAAAATC-AGCACAC-TTCTAGAGGCAA--TAATTGCCATCT-  93

seq1  GCAACATTAATTTTCATTTGTCCACAGAT-ATTTTGCCAATGGGCTTTGA  147
      |||||||| | |||||||||||||||||| |||||||||||||||||  |
seq2  GCAACATT-ACTTTCATTTGTCCACAGATAATTTTGCCAATGGGCTTGAA  142

seq1  AATACGCTAATCCTAGTTACTTCTTTCTATTCATAGGAAACATTATGAAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACGCTAATCCTAGTTACTTCTTTCTATTCATAGGAAACATTATGAAA  192

seq1  TGTCCTAAAGTTATAGGAAAGAATTCATGAGAGATTAA-CCATAAGCAAC  246
      |||||| ||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTCCT-AAGTTATAGGAAAGAATTCATGAGAGATTAACCCATAAGCAAC  241

seq1  AGATTTCCATGGAGGCAAAACCAGTAGG-AAAATAATATACATATTCTGT  295
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGATTTCCATGGAGGCAAAACCAGTAGGAAAAATAATATACATATTCTGT  291

seq1  ACATAATCTATTGATGGTATCTAGCATTCTTCAGTGTTACCAAGCATAAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATCTATTGATGGTATCTAGCATTCTTCAGTGTTACCAAGCATAAT  341

seq1  ATATATCTAGAATGCCGAACTCTTAAAAAATACAAATATTTCATTTCATC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCTAGAATGCCGAACTCTTAAAAAATACAAATATTTCATTTCATC  391

seq1  TTAAATACTAGAATGATCTAAATTATCAAAGCAAGACTGCTCCAATGTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATACTAGAATGATCTAAATTATCAAAGCAAGACTGCTCCAATGTTT  441

seq1  ATCTTCTACTGATAAAAGCATTACCTTAAGCATTTTGAGATGGATATTTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTACTGATAAAAGCATTACCTTAAGCATTTTGAGATGGATATTTC  491

seq1  TCATGGTCATTCACTCAAAAGTTGTGGATTTATTAGCTAAGTACGACCTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTCATTCACTCAAAAGTTGTGGATTTATTAGCTAAGTACGACCTG  541

seq1  TCATCGTATCTTTCCAGACTGACACAAGTCACAGATTGCAACAAATGTAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGTATCTTTCCAGACTGACACAAGTCACAGATTGCAACAAATGTAC  591

seq1  ATTGTGACTTAAGATTACAGAATGATTGGATTTAAAACTTTGAAAGCTGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGACTTAAGATTACAGAATGATTGGATTTAAAACTTTGAAAGCTGA  641

seq1  TATTTGACAACTAAAGAAATACATGTCTCTGAATCAAACAGAATCTCATA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGACAACTAAAGAAATACATGTCTCTGAATCAAACAGAATCTCATA  691

seq1  TTAGTGTATGGAAGGTAGATTTGTTATTTAATTTTGATCTGGATAGCTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTATGGAAGGTAGATTTGTTATTTAATTTTGATCTGGATAGCTTC  741

seq1  CATATTTCTTTCCTTTTCTTGGTAGTACTTATCATTAAAATAGTATTAGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTCTTTCCTTTTCTTGGTAGTACTTATCATTAAAATAGTATTAGT  791

seq1  TTCAGAAAAGATTGAACCCTTATTAAATACCACATCCTTTAATTAATTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAAGATTGAACCCTTATTAAATACCACATCCTTTAATTAATTCT  841

seq1  ATCTGGTAAAGTTTATTATACAAATTGATCAATCAATCAATCTAAATCAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTAAAGTTTATTATACAAATTGATCAATCAATCAATCTAAATCAA  891

seq1  GCTAAATGGGATACAAGACTAAAGTTTAATTTCCAATCTTTCTGTATAAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATGGGATACAAGACTAAAGTTTAATTTCCAATCTTTCTGTATAAG  941

seq1  CCCAGTGTCTACTAGAAAACACTGGATGTTGATTTGTAGTATAGTCTAGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTCTACTAGAAAACACTGGATGTTGATTTGTAGTATAGTCTAGA  991

seq1  TGCCTGTTCTTCCATTTCTTACATGTTAGTTTAAGTAACTAGTTTGTTTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTCTTCCATTTCTTACATGTTAGTTTAAGTAACTAGTTTGTTTA  1041

seq1  ATCAAAGACACCAACAATTCAGGGTACTCAGGAGGCTGAGGTTGAAGGAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGACACCAACAATTCAGGGTACTCAGGAGGCTGAGGTTGAAGGAA  1091

seq1  TACTTGAATAAGGTACTTAACTCCTATCTAATAATAAAAGTAGTGAGTTG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGAATAAGGTACTTAACTCCTATCTAATAATAAAAGTAGTGAGTTG  1141

seq1  TTATACAACCTGTGATAATCAATAATGCTAGAATTC  1181
      ||||||||||||||||||||||||||||||||||||
seq2  TTATACAACCTGTGATAATCAATAATGCTAGAATTC  1177

seq1: chr8_104501752_104502326
seq2: B6Ng01-347D23.g_67_641

seq1  GAATTCTCAGTCATTTAACCCAGTCCCATTGTTTTTGATGGGACAATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTCATTTAACCCAGTCCCATTGTTTTTGATGGGACAATTGT  50

seq1  GGATTTTGTTTATTTATTTATTTATTGGTTTGTGTGCATTGGTCTACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTGTTTATTTATTTATTTATTGGTTTGTGTGCATTGGTCTACATA  100

seq1  TATATGATTTTTTACCGATACCATATTGTTTTTATTTCTATGGCTCAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATTTTTTACCGATACCATATTGTTTTTATTTCTATGGCTCAATA  150

seq1  ACATATCATAAAGTCTGTAATGCTAACCCTTCCTTCAATTTGCTCACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCATAAAGTCTGTAATGCTAACCCTTCCTTCAATTTGCTCACAAT  200

seq1  TATTTTGGATACCAGGAATTTTTCTATGGTTTTGGTTTCTTATAAATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGATACCAGGAATTTTTCTATGGTTTTGGTTTCTTATAAATTTT  250

seq1  AGGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTCTCTAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTCTCTAAACA  300

seq1  TTGAGATAGGGATTTTGGTTTGTGCTATGTTAACTCTTTAGATACTTTTT  350
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTGAGATAGGGATTTTGGTTTGTGCTATGTTAACTCTTTAAATACTTTTT  350

seq1  GCCAAATGTTCATTTATACAATATAGCTTCTACCAATTCAAAACTATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATGTTCATTTATACAATATAGCTTCTACCAATTCAAAACTATGAT  400

seq1  TTATAATTCTATCTTCTGTGGTCTTTCTTTATGTTTTTCTTCAGACATTT  450
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTATAATTCTATCTTCTGTGGTCTTTCTTTATGTTTTTCTTCAAACATTT  450

seq1  AAAGCATCCATTATAGATTTTTTTTCCTTCCTTGGTTAGGTTTATTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATCCATTATAGATTTTTTTTCCTTCCTTGGTTAGGTTTATTCCTA  500

seq1  TTCATGCTTTTGATGCCACCATTAATAAGAGTGTGTCCATGATATCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCTTTTGATGCCACCATTAATAAGAGTGTGTCCATGATATCTTTT  550

seq1  TCTGAATGTGTATTGTTTTACAGCA  575
      |||||||||||||||||||||||||
seq2  TCTGAATGTGTATTGTTTTACAGCA  575