BAC Information

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BAC

Clone NameB6Ng01-347K10
Chromosome8 (Build37)
Map Location 69,720,050 - 69,721,177
singlet/doubletsinglet
Overlap genenone
Upstream geneMarch1, 1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
Downstream geneNat1, Nat2, LOC100041265, Nat3, Psd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347K10.bB6Ng01-347K10.g
ACCGA129191GA129192
length1,2211,140
definitionB6Ng01-347K10.b B6Ng01-347K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacc
agtagccaacatcaaagtaaatgatgagaagctggaagcaatcccactaa
aatcagggactagacaaggctgtccactctctccctacctattcgacatt
gtacttgacgtcctagccagagcaattagacaacaaaaggagatcaaggg
gatacaaattggaaatgaagaactcaaaatatcactttttgcagatgata
ttatagtgtatataagtgaccctaaaaattccaccagagaactcctaagc
ctgataaacagcttcagtgaggtagctggatataaaattaactcaaacaa
gtcagtggcctttctctacacaaaggataaacaggccaagaaagaaatta
gggaaacaacacccttctcaatagtcacaaataatataaaataccttggc
gtgactctaactaaagaagtgaaagatctgtatgataagaacttcaagtc
tctgaagaaagaaattagagaagatctcagaagatggaaagatctcccac
gctcacggattggcaggatcaatatagtaaaaatggctatcttgccaaaa
gcaatctacagattcaatgcaatccccatcaaaattccaactcaattctt
caacgaattagaaagggcaatcggcagattcatctggaataacaaaaaac
ctaggatagcaaaaattcttctcaaggataaaagaacctctggtggaatc
accatgcctgacctaaagatgtactacagagcaattgtgataaaaactgc
atggtatgttgtagtgacagacaagtagaccaatggaacagatttgaagc
cccagagatgaacccacacacctatggtcacttgatctttgacaagggag
ctaaaaccatccagtggaaaaatgacagaattttcaacaaatggtgctgg
cacactgacaagttatcatgtagaaaatgcaaattgatccatttccatct
ccttgtactaaggtcaaatctaagtggatatatacctcacataaaccaga
gacactgaaacttattgaggagaaaggtaggaaagctcgaagatttgggt
acagggtaaatctgaatgaacagcaatgcttgtgcttagatgagatcgaa
atggaactctaattgccagctcgcaaggccaagacccgttcaataagacg
aaagtcacctaccacgattgg
gaattctcttaataaatcatcaaaatggagcagttttgagctctctggag
tatgtgattaacaataaaacttttattaactgtgaaatcactgaagtagc
agtgtattcttaacccttaagaatacacacacacacacacacacacacac
acacacacacacacacacacacagagagagagagagagagagagagagag
agagagagagatacacatttgaagacaaaattaacagaatatttagagaa
ccattctccatactaaattttaaatctcttatatgttatgttattgtctc
atggtagataaagctgggattcaagcttagacttatgaagacatcaaatg
gaacaaattatactctgtcttaccagaactcttatgctaatggaggatta
gtggacccaagattactagataagagtatgtggacagactttagactgag
aaacttggatgtctgaattatcattaattgttcacgttacagttgacttg
ctttccccatccctgaggctgtctagtgcacctttgtatgaaacctttcc
tgggtcagttgattgctttctaatctgatgtcagttctcatggaactgcc
cttcatttcatctctgttcctataggatttcacctgaatttgatcctgct
ttgatctactgcaaatggaaaggtttcaacctggcacaaaatgagacaag
ctgcatgcactctacggcaatgcaaatatcagattcctctcccctgtatc
tgaaacattttcagagagcatgtgtgactgaaggatgcatgggtatttga
caaaaagaagagtaataaaagttttcaaataactcaaatttgggggacaa
tgttccaatccaagtcaggatttggcatacagtatattcccttgggtacc
taagagtgataagaaatataccaatgaaagttgagtcaacaacagcctta
tgttattgaaatcaataatggtagcgatggctggagtactggtaaggaga
aagcctaacatttcaggaaactaggaatatggggatacagttcgattatc
cataccatattaattcccaaagtcctggagaatcacctttgaaatgcatt
ataggtagaaatttaaaaactgatctttatggaatattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69720050_69721177
seq2: B6Ng01-347K10.g_72_1211

seq1  GAATTCTCTTAATAAATCATCAAAATGGAGCAGTTTTGAGCTCTCTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAATAAATCATCAAAATGGAGCAGTTTTGAGCTCTCTGGAG  50

seq1  TATGTGATTAACAATAAAACTTTTATTAACTGTGAAATCACTGAAGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGATTAACAATAAAACTTTTATTAACTGTGAAATCACTGAAGTAGC  100

seq1  AGTGTATTCTTAACCCTTAAGAATACACACACACACACACACACACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATTCTTAACCCTTAAGAATACACACACACACACACACACACACAC  150

seq1  ACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAG  200

seq1  AGAGAGAGAGATACACATTTGAAGACAAAATTAACAGAATATTTAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGATACACATTTGAAGACAAAATTAACAGAATATTTAGAGAA  250

seq1  CCATTCTCCATACTAAATTTTAAATCTCTTATATGTTATGTTATTGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTCCATACTAAATTTTAAATCTCTTATATGTTATGTTATTGTCTC  300

seq1  ATGGTAGATAAAGCTGGGATTCAAGCTTAGACTTATGAAGACATCAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGATAAAGCTGGGATTCAAGCTTAGACTTATGAAGACATCAAATG  350

seq1  GAACAAATTATACTCTGTCTTACCAGAACTCTTATGCTAATGGAGGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAATTATACTCTGTCTTACCAGAACTCTTATGCTAATGGAGGATTA  400

seq1  GTGGACCCAAGATTACTAGATAAGAGTATGTGGACAGACTTTAGACTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACCCAAGATTACTAGATAAGAGTATGTGGACAGACTTTAGACTGAG  450

seq1  AAACTTGGATGTCTGAATTATCATTAATTGTTCACGTTACAGTTGACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGGATGTCTGAATTATCATTAATTGTTCACGTTACAGTTGACTTG  500

seq1  CTTTCCCCATCCCTGAGGCTGTCTAGTGCACCTTTGTATGAAACCTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCCATCCCTGAGGCTGTCTAGTGCACCTTTGTATGAAACCTTTCC  550

seq1  TGGGTCAGTTGATTGCTTTCTAATCTGATGTCAGTTCTCATGGAACTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCAGTTGATTGCTTTCTAATCTGATGTCAGTTCTCATGGAACTGCC  600

seq1  CTTCATTTCATCTCTGTTCCTATAGGATTTCACCTGAATTTGATCCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTCATCTCTGTTCCTATAGGATTTCACCTGAATTTGATCCTGCT  650

seq1  TTGATCTACTGC-AATGGAAAGGTTTCAACCTGGCACAAAATGAGACAAG  699
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTGATCTACTGCAAATGGAAAGGTTTCAACCTGGCACAAAATGAGACAAG  700

seq1  CTGCATGCACTCTACGGCAATGCAAATATCAGATTCCTCTCCCCTGTATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGCACTCTACGGCAATGCAAATATCAGATTCCTCTCCCCTGTATC  750

seq1  TGAAACATTTTCAGAGAGCATGTGTGACTGAAGGATGCATGGGTATTTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACATTTTCAGAGAGCATGTGTGACTGAAGGATGCATGGGTATTTGA  800

seq1  CAAAAAGAAGAGTAATAAAAG-TTTCAAATAACTCAAATTT-GGGGACAA  847
      ||||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  CAAAAAGAAGAGTAATAAAAGTTTTCAAATAACTCAAATTTGGGGGACAA  850

seq1  TGTT-CAATCC-AGTCAGGATTTGGCATACAGTATATTCCCTTGGGTACC  895
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAATCCAAGTCAGGATTTGGCATACAGTATATTCCCTTGGGTACC  900

seq1  TAAGAGTGATAAG-AATATACCAAATGAAAGTTGAGTCAACAACAGCC-T  943
      ||||||||||||| |||||||| ||||||||||||||||||||||||| |
seq2  TAAGAGTGATAAGAAATATACC-AATGAAAGTTGAGTCAACAACAGCCTT  949

seq1  ATGTTAATGAAATCAAT-ATGGTAGCGAT-GCTGGAGTACT-GTAAGGAG  990
      |||||| |||||||||| ||||||||||| ||||||||||| ||||||||
seq2  ATGTTATTGAAATCAATAATGGTAGCGATGGCTGGAGTACTGGTAAGGAG  999

seq1  AAAGCCTAACAATTCAGGAAACTAGGAATATGGGAATACAGTTCGATTAT  1040
      ||||||||||| |||||||||||||||||||||| |||||||||||||||
seq2  AAAGCCTAACATTTCAGGAAACTAGGAATATGGGGATACAGTTCGATTAT  1049

seq1  ACAATACCATATT-ATTCCCAAAGTCCTGGAAGAT-ACACTTGAAATGCA  1088
       | |||||||||| |||||||||||||||||  || ||  ||||||||||
seq2  -CCATACCATATTAATTCCCAAAGTCCTGGAGAATCACCTTTGAAATGCA  1098

seq1  -TATAGTCAGAATTTTAAAAACTGAT-TTTATGAATAATTAA  1128
       |||||  |||| ||||||||||||| |||||| |  |||||
seq2  TTATAGGTAGAAATTTAAAAACTGATCTTTATGGAATATTAA  1140