BAC Information

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BAC

Clone NameB6Ng01-348A02
Chromosome8 (Build37)
Map Location 49,159,581 - 49,160,722
singlet/doubletsinglet
Overlap genenone
Upstream geneEnpp6, Stox2, 4930448N21Rik, D030016E14Rik, Rwdd4a, LOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113
Downstream geneDctd, Odz3, 2900073C17Rik, LOC100039866
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348A02.bB6Ng01-348A02.g
ACCGA129436GA129437
length1,1551,121
definitionB6Ng01-348A02.b B6Ng01-348A02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagacttcacacaattgcagaaactatctgctcttggtaaaatc
acgcccctgcttatagcatgaggcaagtcctagtcagctgctgtggacag
tctgaagcagcaccatatgccacacctggtattaaaacaaaacatatgtg
catattatttctgttttctaaagaagccaaaactttataactgttactac
atagggtctctttttggcttggaactcactgtgtcacatagaatagctgg
tcagtaaaccacagagttgtaactctttataccttcccagtgctggctta
tgaaccaccacacctgactttgatttgtgtgtgcgtatgtgtgtatgtgc
atatgcatgtatgtacgtgtttatgatttttagagacagggtttctctgt
gtaaccctgctttcctggaactcactctgtagaccaggctggtcttgaac
tcagataacccgcctgcctctgcctccctagtgctgagattaaaggtgtg
tgtcaccactccccagtgactatttttaatgtggtttctgggaggcaagt
actttattgatggagccacctctccagctcaattttatttccaagtcagg
aaatacttgtgtatcccatctaccctcaaattgtaatctttttttgcctc
accctctgaagtactggggactcagagacttaccgtgttcttggaccaag
gtgtctttaactcttttacttctgatctctggttactacctctgggagac
catttaaatttttcctgtttcctttctaaaacaatagatccttgattatc
ctataccatgaaaaacgaatgtctgatggtggctatccatgccattgtta
aatttgatatgatatgctaaaagttttcttcaatttaatacagaattcca
tttcataaatattgatgagcacgtattttatgccaggtcatggggacata
gaagtaaaggaggcttttgacatttgagatttcctaactcagtgaaaggt
tcagagcagagacaaactgatatcatattgtagagtgttaattgacttat
gatttagcatcatgtcagcacacgagagaacacttaaacagacttataac
ggccaggtccctgaatgagattggcgctgaacctggcttcaggtagcaag
catca
gaattctctttaatagggacggggtttcgttttctctctctcttgcttct
tgctctcttgcttcttgcactctggctcctgaagatgtaagcaataaagc
tttgccgcagaagattctggtctgtggtgttcttcctggccggtcgtgag
aacgcgtctaataacaattggtgccgaattccgggacgagaaagaaactc
gggactggcgcaaggaagatccctcattccagaaccagaactgcgggtcg
cggtaataaaggttcccgtaaagcagactgttaagaaggattcaactgta
tgaattcagaacttttcagctggggaacgagagtaccagtgagtacagct
ttacgaggtaagtctgatcttgaactttctaaggaaattcaagacagtct
atcagaagtaaagtggaatatgtttggccttgaattttttctggtgttag
gagcccttttgttccttttcacatgttatcaggtgattaagatagggcgg
attctagatgaaattcaggacaagctatcagaagtaaagcggggagagag
agtaggagcaaagagaaaatatggtacacaaaataagtatacaggccttt
ccaagggtcttgaacccgaggaaaagtttaggtcaggtaagaatacctgg
ggagagattagaaggaaggaaaagaaaaaagaaaagaaaaaagatcgatt
agcggaggtctctaagagatactcgtcactagatgagctcaggaagccag
ctcttagtagttctgaagcagatgaagaattctcctctgaggaaacagac
tgggaggaagaagcagcccattaccagccagctaattggtcaagaaaaaa
gccaaaagcggctggcgaaagccagcgtactgttcaacctcccggcagtc
ggtttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcag
caatgcgcagagagatgcgcagagaggcagtgcgcagagagcagtgcgca
agagcagtgcgcagactcatccattccagagagaacaatgaaaataccac
cagcattccgacatggacggtcgaggtgtcttcagctcggtagatcctac
cagtaaggaattgccaaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49159581_49160722
seq2: B6Ng01-348A02.b_62_1198

seq1  AATTGCAGAAACTATCTGCTCTTGGTAAAATCACGCCCCTGCTTATAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAGAAACTATCTGCTCTTGGTAAAATCACGCCCCTGCTTATAGCA  50

seq1  TGAGGCAAGTCCTAGTCAGCTGCTGTGGACAGTCTGAAGCAGCACCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAAGTCCTAGTCAGCTGCTGTGGACAGTCTGAAGCAGCACCATAT  100

seq1  GCCACACCTGGTATTAAAACAAAACATATGTGCATATTATTTCTGTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACCTGGTATTAAAACAAAACATATGTGCATATTATTTCTGTTTTC  150

seq1  TAAAGAAGCCAAAACTTTATAACTGTTACTACATAGGGTCTCTTTTTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGCCAAAACTTTATAACTGTTACTACATAGGGTCTCTTTTTGGC  200

seq1  TTGGAACTCACTGTGTCACATAGAATAGCTGGTCAGTAAACCACAGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACTCACTGTGTCACATAGAATAGCTGGTCAGTAAACCACAGAGTT  250

seq1  GTAACTCTTTATACCTTCCCAGTGCTGGCTTATGAACCACCACACCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCTTTATACCTTCCCAGTGCTGGCTTATGAACCACCACACCTGAC  300

seq1  TTTGATTTGTGTGTGCGTATGTGTGTATGTGCATATGCATGTATGTACGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTGTGTGTGCGTATGTGTGTATGTGCATATGCATGTATGTACGT  350

seq1  GTTTATGATTTTTAGAGACAGGGTTTCTCTGTGTAACCCTGCTTTCCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGATTTTTAGAGACAGGGTTTCTCTGTGTAACCCTGCTTTCCTGG  400

seq1  AACTCACTCTGTAGACCAGGCTGGTCTTGAACTCAGATAACCCGCCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTCTGTAGACCAGGCTGGTCTTGAACTCAGATAACCCGCCTGCC  450

seq1  TCTGCCTCCCTAGTGCTGAGATTAAAGGTGTGTGTCACCACTCCCCAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCTAGTGCTGAGATTAAAGGTGTGTGTCACCACTCCCCAGTG  500

seq1  ACTATTTTTAATGTGGTTTCTGGGAGGCAAGTACTTTATTGATGGAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTTAATGTGGTTTCTGGGAGGCAAGTACTTTATTGATGGAGCCA  550

seq1  CCTCTCCAGCTCAATTTTATTTCCAAGTCAGGAAATACTTGTGTATCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCAGCTCAATTTTATTTCCAAGTCAGGAAATACTTGTGTATCCCA  600

seq1  TCTACCCTCAAATTGTAATCTTTTTTTGCCTCACCCTCTGAAGTACTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCTCAAATTGTAATCTTTTTTTGCCTCACCCTCTGAAGTACTGGG  650

seq1  GACTCAGAGACTTACCGTGTTCTTGGACCAAGGTGTCTTTAACTCTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGAGACTTACCGTGTTCTTGGACCAAGGTGTCTTTAACTCTTTTA  700

seq1  CTTCTGATCTCTGGTTACTACCTCTGGGAGACCATTTAAATTTTTCCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATCTCTGGTTACTACCTCTGGGAGACCATTTAAATTTTTCCTGT  750

seq1  TTCCTTTCTAAAACAATAGATCCTTGATTATCCTATACCATGAAAAACGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTAAAACAATAGATCCTTGATTATCCTATACCATGAAAAACGA  800

seq1  ATGTCTGATGGTGGCTATCCATGCCATTGTTAAATTTGATATGATATGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGATGGTGGCTATCCATGCCATTGTTAAATTTGATATGATATGCT  850

seq1  AAAAGTTTTCTTCAATTTAATACAGAATTCCATTTCATAAATATTTGATG  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAAGTTTTCTTCAATTTAATACAGAATTCCATTTCATAAATA-TTGATG  899

seq1  AGCACGTATTTTATGCCAGGTCATGGGGACATAGAAGTAAAGGAGGGCTT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGCACGTATTTTATGCCAGGTCATGGGGACATAGAAGTAAAGGA-GGCTT  948

seq1  TTGACATTTGAGGATTTCCTAACCCAGTGAAAGGTTCAGAGCAGAAGACA  1000
      ||||||||||| ||||||||||| |||||||||||||||||||| |||||
seq2  TTGACATTTGA-GATTTCCTAACTCAGTGAAAGGTTCAGAGCAG-AGACA  996

seq1  AACTGATATCATATTGTAGAGTG-TAATTGACTTATGAATTTAGCATCAT  1049
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  AACTGATATCATATTGTAGAGTGTTAATTGACTTATG-ATTTAGCATCAT  1045

seq1  GTCAGCACACGGAGAG-ACACCTAAACAGACTTAATAAGGGCAGGGTTCC  1098
      |||||||||| ||||| |||| ||||||||||||  | || ||||  |||
seq2  GTCAGCACAC-GAGAGAACACTTAAACAGACTTATAACGGCCAGG--TCC  1092

seq1  CTG-ATGAGA-TGGCGCTG-AGCTGGCTTCAAGGGTAGCAAGCATCA  1142
      ||| |||||| |||||||| | |||||||||  ||||||||||||||
seq2  CTGAATGAGATTGGCGCTGAACCTGGCTTCA--GGTAGCAAGCATCA  1137