BAC Information

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BAC

Clone NameB6Ng01-348D02
Chromosome8 (Build37)
Map Location 25,197,730 - 25,198,571
singlet/doubletsinglet
Overlap genenone
Upstream geneAnk1, Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1, LOC100040931, Zmat4
Downstream gene1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-348D02.g
ACCGA129560
length844
definitionB6Ng01-348D02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacacagtggggcaaagagcatcctcagccaacatgacttatct
tttatctatatttatacaagttcactgggttcttagtgggctgcaaatga
acacttcagggcaaattctgagtaagtcacaggagacccaaagagattta
catgcctggacaggaggcctaatggaacatctgtcacttgatctgggtgg
ctggcagttagagctgtctagctattcttcatggcactggtatgaaagtc
agtgaattttacagttcttgctaacaccctggcttggcagggaatctggc
tacctctggcccctaccacagtatcatcttttcactggtaacgggatata
gtcctgagtaatgattcttccagtctactaggaatgtaagatgagctaat
ggaaatgtctttggatggtggtaaagagagccaaatcactaatttgagga
actgagaaagaatcttgagtatggagagagagagggcagaaggagtcccc
agagcctcccagttgtggcataagctggtgtctggaaagaatggaaaaat
cgctaaaagcacctccagtttgctttttatcacccatgctctggttattc
taaatgtcagtaatgaaattttctcgagctggggagactacccgtccctt
ggccctccatctgcaatgctcgaaagtgtgttaatataacactctgtctg
gatgatgatagcagtgagccccagtatctggctgacttcctagagctaga
aatatatgcttaaaacctaacttttctttctgtatcctaaatgctctttc
cagaccattatctgcctgactcaggggtgggaaacactggcggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25197730_25198571
seq2: B6Ng01-348D02.g_69_912

seq1  GAATTCAACACAGTGGGGCAAAGAGCATCCTCAGCCAACATGACTTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACACAGTGGGGCAAAGAGCATCCTCAGCCAACATGACTTATCT  50

seq1  TTTATCTATATTTATACAAGTTCACTGGGTTCTTAGTGGGCTGCAAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTATATTTATACAAGTTCACTGGGTTCTTAGTGGGCTGCAAATGA  100

seq1  ACACTTCAGGGCAAATTCTGAGTAAGTCACAGGAGACCCAAAGAGATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCAGGGCAAATTCTGAGTAAGTCACAGGAGACCCAAAGAGATTTA  150

seq1  CATGCCTGGACAGGAGGCCTAATGGAACAGCTGTCACTTGATCTGGGTGG  200
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CATGCCTGGACAGGAGGCCTAATGGAACATCTGTCACTTGATCTGGGTGG  200

seq1  CTGGCAGTTAGAGCTGTCAAGCTATTCTTCATGGTACTGGTATGAAAGTC  250
      |||||||||||||||||| ||||||||||||||| |||||||||||||||
seq2  CTGGCAGTTAGAGCTGTCTAGCTATTCTTCATGGCACTGGTATGAAAGTC  250

seq1  AGTGTATTTTACAGTTCTTGCTAACACCCTGGCTTGGCAGGGAATCTGGC  300
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATTTTACAGTTCTTGCTAACACCCTGGCTTGGCAGGGAATCTGGC  300

seq1  TACCTCTGGCCCCTACCACAGTATCATCTTTTCACTGGTAACGGGATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTGGCCCCTACCACAGTATCATCTTTTCACTGGTAACGGGATATA  350

seq1  GTCCTGAGTAATGATTCTTCCAGTCTACTAGGAATGTAAGATGAGCAAAT  400
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTCCTGAGTAATGATTCTTCCAGTCTACTAGGAATGTAAGATGAGCTAAT  400

seq1  GGAAATGTCTTTGGATGGTGGTAAAGAGAGCCGAATCACAGATTTGAGGA  450
      |||||||||||||||||||||||||||||||| ||||||  |||||||||
seq2  GGAAATGTCTTTGGATGGTGGTAAAGAGAGCCAAATCACTAATTTGAGGA  450

seq1  ACTGAGAAAGAATCTTGAGTAGGGAGAGAGAGAGTGCAGAAGGAGTCCCC  500
      ||||||||||||||||||||| |||||||||||| |||||||||||||||
seq2  ACTGAGAAAGAATCTTGAGTATGGAGAGAGAGAGGGCAGAAGGAGTCCCC  500

seq1  AGAGCCTCCCAGTTGTGGCATAAGCAGGTGTCTGGAAAGAATGGAAAAAT  550
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGAGCCTCCCAGTTGTGGCATAAGCTGGTGTCTGGAAAGAATGGAAAAAT  550

seq1  CGCTAAAAGCACCTCCAGTTTGCTTTTTATCACCCATGCGCTGGTAATTC  600
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  CGCTAAAAGCACCTCCAGTTTGCTTTTTATCACCCATGCTCTGGTTATTC  600

seq1  TAAATGTCAGTGATGAAATTTTCTCGAGCTGGGGAGACTACCCGTCCCTT  650
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTCAGTAATGAAATTTTCTCGAGCTGGGGAGACTACCCGTCCCTT  650

seq1  GGCCCTCCATCTGCAGTTGCTTGAAAGTGGGTTAATGTAACACTCTCGCT  700
      |||||||||||||||  |||| ||||||| |||||| |||||||||  ||
seq2  GGCCCTCCATCTGCA-ATGCTCGAAAGTGTGTTAATATAACACTCTGTCT  699

seq1  GGTTGATGAAGGAAGTGAGCCCCAGTATCTGGCTGACTCCCTAAAGCTAG  750
      || ||||||  | ||||||||||||||||||||||||| |||| ||||||
seq2  GGATGATGATAGCAGTGAGCCCCAGTATCTGGCTGACTTCCTAGAGCTAG  749

seq1  -AGTAGCTGC-TAAAATCTAGCTTTCCTTTCTGTATCCCAGAGGC-CTTT  797
       | ||  ||| ||||| ||| |||| |||||||||||| | | || ||||
seq2  AAATATATGCTTAAAACCTAACTTTTCTTTCTGTATCCTAAATGCTCTTT  799

seq1  CCAGCCCATTACCTGCCTGACTCAGGGGTTGGAAACACTGGTGGG  842
      |||| |||||| ||||||||||||||||| ||||||||||| |||
seq2  CCAGACCATTATCTGCCTGACTCAGGGGTGGGAAACACTGGCGGG  844