BAC Information

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BAC

Clone NameB6Ng01-349D23
Chromosome8 (Build37)
Map Location 113,850,794 - 113,851,889
singlet/doubletsinglet
Overlap geneMlkl
Upstream geneHydin, LOC672398, Vac14, BC060632, 2010004A03Rik, Sf3b3, Cog4, Fuk, St3gal2, Ddx19a, Ddx19b, Aars, Exosc6, Mrcl, 4930402E16Rik, 9430091E24Rik, Glg1, Rfwd3, LOC547023
Downstream geneFa2h, Wdr59, Znrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498, LOC100042040
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349D23.bB6Ng01-349D23.g
ACCGA130297GA130298
length1,0461,084
definitionB6Ng01-349D23.b B6Ng01-349D23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactttgtgttgggcatggtgggataaatctttaatctagctctt
gggatacagaggcatgtgggcctctgaattctagaccagcctggaccaca
cagtgaatttcctgctagctagggctacaaaaggagatcctgcctctgat
agatagatagatagatagatagatagatagagttttgctcaccttgacag
cacataacacactaaaatgagaagatctacagataaggtaaacatgactc
ttgctcaaggaggataaattcgtaaagcttttactgtttgttgttgtttc
gtggggtgcatttggggagctgggggggggtcaagacagtgtcttctata
tggctgtgactgtcctggagctcactatgtagaccaggctggccttaaac
tcacagagacctgcctgcctctgcttccagagtgctagaaccgaaggcat
gtgccactgtgtctggctgcatttcctcttttcagtcagtatatcatggg
actccttgcacatcaggggttattgcggcacgatttataatagcttagtt
atagaaccaacctctgtccatcagcagagagtagctaagaatatggggct
ggaaagacagctcgatggttcagaggacttactgctctttcagaggaccc
ggttcagttcccagcacccacatggcagatcacaactgtctgtaactcca
agattctgacacgctcacacagacatacatgcaggcaaaataccaataca
agtaagatacaaataaattcttagaaaaaagaaaatgtggtatctataca
cagtgggcattgcagtaaagcaaggaagagtgagtggcgttagtgcaagg
gagttgtgtgcctggagattatcctttccacgtgaacttaattccatgtc
tataatcaaggaattccacgtgtctctgccttgtggattctagattttag
tattacataaaaccatgcatgcctatgacatgatagtagaaatgaaactt
gccttagggaatagaggagtggaggttagaagaaggagagaggatg
gaattctcagtacctcagaattgtcatacagattctgtaagggctacgta
tagtggcatcactgttggtgggagagagttggaagcagatgttttacatc
ctgggaaatagtcaaaatgcacagtgataccgaatgggtcaccagattca
cttaaaatggctcagcacatacccgacgctgagtcaggaaagtgaggaat
gtagcgggtggacagaccactctctctcacctatgaaaacctaatgaaag
agcatattttacaaaaaaatacagcgatacaacacagaattcccagcacc
acaccaaaaagagaacaaattgagaaacaggattataaggtaaaaatttg
gttgttgttttgagacaaggtctctaggtagccctggctagcctggaact
ctctatgtagactaggctgaccttgaactcagagagagcctgtctctgcc
tcatgggtgctgtgattaaaaacacgcactgctgtgtctggaaaagacta
taaattttgaaagatacatgaagccatgagtaaaagagacttggggtaga
aagagagttgcccaagactggcctatttctttttcttttgtgtgcatgag
tattttgcctgcatgtttgtctgtgtaccatgtgtgtgcttggcacctgt
gagccagaaagggcgtcagattctctggaactggagttccaggtgtgaac
ttgatgcttgtgccaaaaattgaacctggatcctctgtaagagcaagaag
tgcctccccccaccaacttctctggttctataggctctgtttcttaataa
tacagactaagtcatttaaccctttagagcctgacaccctcacccccatt
taataaggagaaaatatacctttctctttgggaagttggtatgtatgaag
agtcatatcctatagcttacccaacactttcggcctgggggttgttgaat
actttgatggtaactggagatctgtgatactctcctctataatggtgctc
atttactgtcttcagttggtccacggaggtcagatgttctttgaaatctc
ttgattgagatcttgtgggatctctgggtgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_113850794_113851889
seq2: B6Ng01-349D23.g_66_1149

seq1  GAATTCTCAGTACCTCAGAATTGTCATACAGATTCTGTAAGGGCTACGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTACCTCAGAATTGTCATACAGATTCTGTAAGGGCTACGTA  50

seq1  TAGTGGCATCACTGTTGGTGGGAGAGAGTTGGAAGCAGATGTTTTACATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCATCACTGTTGGTGGGAGAGAGTTGGAAGCAGATGTTTTACATC  100

seq1  CTGGGAAATAGTCAAAATGCACAGTGATACCGAATGGGTCACCAGATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAATAGTCAAAATGCACAGTGATACCGAATGGGTCACCAGATTCA  150

seq1  CTTAAAATGGCTCAGCACATACCCGACGCTGAGTCAGGAAAGTGAGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATGGCTCAGCACATACCCGACGCTGAGTCAGGAAAGTGAGGAAT  200

seq1  GTAGCGGGTGGACAGACCACTCTCTCTCACCTATGAAAACCTAATGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCGGGTGGACAGACCACTCTCTCTCACCTATGAAAACCTAATGAAAG  250

seq1  AGCATATTTTACAAAAAAATACAGCGATACAACACAGAATTCCCAGCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATTTTACAAAAAAATACAGCGATACAACACAGAATTCCCAGCACC  300

seq1  ACACCAAAAAGAGAACAAATTGAGAAACAGGATTATAAGGTAAAAATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAAAAGAGAACAAATTGAGAAACAGGATTATAAGGTAAAAATTTG  350

seq1  GTTGTTGTTTTGAGACAAGGTCTCTAGGTAGCCCTGGCTAGCCTGGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTTTTGAGACAAGGTCTCTAGGTAGCCCTGGCTAGCCTGGAACT  400

seq1  CTCTATGTAGACTAGGCTGACCTTGAACTCAGAGAGAGCCTGTCTCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGTAGACTAGGCTGACCTTGAACTCAGAGAGAGCCTGTCTCTGCC  450

seq1  TCATGGGTGCTGTGATTAAAAACACGCACTGCTGTGTCTGGAAAAGACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGTGCTGTGATTAAAAACACGCACTGCTGTGTCTGGAAAAGACTA  500

seq1  TAAATTTTGAAAGATACATGAAGCCATGAGTAAAAGAGACTTGGGGTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTGAAAGATACATGAAGCCATGAGTAAAAGAGACTTGGGGTAGA  550

seq1  AAGAGAGTTGCCCAAGACTGGCCTATTTCTTTTTCTTTTGTGTGCATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGTTGCCCAAGACTGGCCTATTTCTTTTTCTTTTGTGTGCATGAG  600

seq1  TATTTTGCCTGCATGTTTGTCTGTGTACCATGTGTGTGCTTGGCACCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGCCTGCATGTTTGTCTGTGTACCATGTGTGTGCTTGGCACCTGT  650

seq1  GAGCCAGAAAGGGCGTCAGATTCTCTGGAACTGGAGTTCCAGGTGTGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGAAAGGGCGTCAGATTCTCTGGAACTGGAGTTCCAGGTGTGAAC  700

seq1  TTGATGCTTGTGCCAAAAATTGAACCTGGATCCTCTGTAAGAGCAAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCTTGTGCCAAAAATTGAACCTGGATCCTCTGTAAGAGCAAGAAG  750

seq1  TGCCTCCCCCCACCAACTTCTCTGGTTCTATAGGCTCTGTTTCTTAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCCCCACCAACTTCTCTGGTTCTATAGGCTCTGTTTCTTAATAA  800

seq1  TACAGACTAAGTCATTTAACCCTTTAGAGCCTGACACCCTCACCCCCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACTAAGTCATTTAACCCTTTAGAGCCTGACACCCTCACCCCCATT  850

seq1  TAATAAAGGAGAAAATATACCTTTCTCTTTGGGAAGTTGGTATGTATGAA  900
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAT-AAGGAGAAAATATACCTTTCTCTTTGGGAAGTTGGTATGTATGAA  899

seq1  GAGTCATATCCTATAGCTTACCCAACACTTTCGGCCTGGGGGTTGTTGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATATCCTATAGCTTACCCAACACTTTCGGCCTGGGGGTTGTTGAA  949

seq1  TACTTTGATGGTAACTGGAGATCTGTGATACTCTCCTCTATAAATGGTGC  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TACTTTGATGGTAACTGGAGATCTGTGATACTCTCCTCTAT-AATGGTGC  998

seq1  TCATTTTACTTGTCTTCAGTTTGGTCCACGGAGGTCCAAGATGTTCCTTT  1050
      ||| ||||| ||||||||| ||||||||||||||||  ||||||| ||||
seq2  TCA-TTTAC-TGTCTTCAG-TTGGTCCACGGAGGTC--AGATGTT-CTTT  1042

seq1  GGAATCTCCTTGATTTGGAGATCTTGTGGGATCTCCTGTGTGGGTT  1096
      | ||||| |||||||  ||||||||||||||||| ||| |||||||
seq2  GAAATCT-CTTGATT--GAGATCTTGTGGGATCT-CTGGGTGGGTT  1084