BAC Information

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BAC

Clone NameB6Ng01-349K19
Chromosome8 (Build37)
Map Location 52,616,982 - 52,617,575
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039966, LOC667517
Downstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349K19.bB6Ng01-349K19.g
ACCGA130597GA130598
length7381,009
definitionB6Ng01-349K19.b B6Ng01-349K19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagcacaactaggtctatacagagaaaccctgtcttggaaaaag
aaaaaagaaaacaaaagaaacaaaggacaatgtcttatctaaaattttag
aaatctatttggtagattccaaaagccaaaagccatcaccccccttttaa
atctaggtagcatacatgatgtaaaagttaagccatcttcagtagtccat
gattggctctatctctgatgttcaggttgggaagtataaagggaaagggg
aaagagggggaagtggggatagtccacatccagccagagtttctcctgtg
ctctggttaagcagacatgggaaggctgacagatgctttccactcggctt
caggtgggcatctaagccactgaccccactcgacaaggggaggacaaggg
gcagcccccaacctgggtggggcaacaccctgtagtcccagtattatggg
atagagggcagaagggagaaaggttcccatgcaggtgagagtaagcacag
tgggccttgatgaacagagacagtctatggtttcagagctttatttatag
ataggcaggggaaaggaagaaagtgagagagagagagagagagagagaga
gagagagagaccgggtcatagcaaaaaggaaagaaaggagaaagagagaa
gaaaggctagagaggaaaaagggagacagaggaatagactgaaagggaga
gagggagtgtaggggggattaagaaagtgaggttgggt
gaattctgtactaaacccatctggtcctgggctttttgtttgtttgtttg
tttgggagacttttaatgcctgctgctatttctttaggggttatgggatt
gtttatatgatttatcatatcctgatttaactttgacaacttgtatctgt
ctagaaaattgtccatttcatcaagatttttcaatttttttgagaatatg
cttttgtagtatgatctaatgatctttttaaaaaaaatcctcaatttcca
ttgttatgtcttccttttcctttctgattttactaatttggagactgtct
ctgtgccatctgcttagtctggccaagggtttatctatcctgttgatttt
ctcaaagaacgagctcctggtttggttaattctttgtacagatcttttgt
tttcttcatggttcatttcagccttgattttggttatttcctgccattta
ctcctcatgtgtgtatttgtatcttttttttttttttcctagagcttcaa
gatgtgctgtcaagctgctagtttatgttctccccaatttctttttggag
gcatttagtgctatgagttttcctcttagtattgccttcgttgtgtccca
catattttggtattatgtaccttcgtttttatcaaattttaagacgtctt
taatttctttctttatttctttcttgatcaatttatcactgagaagagtg
ttgttcagcttccatgtgtacgtgtgctttccattgattttgttgttatt
gaagatcaggctaagtccatggtgatctgataggatgcatgggattattt
caaatttcttgaatctgtagaggctgattttgaccaattatatggtcagt
tttggagaaagttaccatgaggtgctaagaaggtggtaacattttttttt
tttttagatattttcaatgtgtctcaattataccagctctttgaatcatc
agccatttaactaatatgtgggaatctgatatactggaatcactgttgta
ccttgcgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52616982_52617575
seq2: B6Ng01-349K19.g_479_1074

seq1  CATTTCAGCCTTGATTTTGGTTATTTCCTGCCATTTACTCCTCATGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGCCTTGATTTTGGTTATTTCCTGCCATTTACTCCTCATGTGTG  50

seq1  TATTTGTATCTTTTTTTTTTTTTTCCTAGAGCTTCAAGATGTGCTGTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTATCTTTTTTTTTTTTTTCCTAGAGCTTCAAGATGTGCTGTCAA  100

seq1  GCTGCTAGTTTATGTTCTCCCCAATTTCTTTTTGGAGGCATTTAGTGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTAGTTTATGTTCTCCCCAATTTCTTTTTGGAGGCATTTAGTGCTA  150

seq1  TGAGTTTTCCTCTTAGTATTGCCTTCGTTGTGTCCCACATATTTTGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTCCTCTTAGTATTGCCTTCGTTGTGTCCCACATATTTTGGTAT  200

seq1  TATGTACCTTCGTTTTTATCAAATTTTAAGACGTCTTTAATTTCTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACCTTCGTTTTTATCAAATTTTAAGACGTCTTTAATTTCTTTCTT  250

seq1  TATTTCTTTCTTGATCAATTTATCACTGAGAAGAGTGTTGTTCAGCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTCTTGATCAATTTATCACTGAGAAGAGTGTTGTTCAGCTTCC  300

seq1  ATGTGTACGTGTGCTTTCCATTGATTTTGTTGTTATTGAAGATCAGGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTACGTGTGCTTTCCATTGATTTTGTTGTTATTGAAGATCAGGCTA  350

seq1  AGTCCATGGTGATCTGATAGGATGCATGGGATTATTTCAAATTTCTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATGGTGATCTGATAGGATGCATGGGATTATTTCAAATTTCTTGAA  400

seq1  TCTGTAGAGGCTGATTTTTGACCAATTATATGGTCAGTTTTGGAG-AAGG  449
      |||||||||||||| |||||||||||||||||||||||||||||| ||| 
seq2  TCTGTAGAGGCTGA-TTTTGACCAATTATATGGTCAGTTTTGGAGAAAGT  449

seq1  TACCATGAGGTGCTAAGAAGGTGGTAACA-TTTTTTTTTTTTTAGATATT  498
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TACCATGAGGTGCTAAGAAGGTGGTAACATTTTTTTTTTTTTTAGATATT  499

seq1  TTCAATGTGTCTCAATTTATACCAGCTCTTTGAATCATCAGCCATTTAAC  548
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTCAATGTGTCTCAA-TTATACCAGCTCTTTGAATCATCAGCCATTTAAC  548

seq1  TAATATGTGGGAATCT-TGATACTGG-ATCACTGTTGTACCTTGCGTT  594
      ||||||||||||||||   ||||||| |||||||||||||||||||||
seq2  TAATATGTGGGAATCTGATATACTGGAATCACTGTTGTACCTTGCGTT  596