BAC Information

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BAC

Clone NameB6Ng01-349K22
Chromosome8 (Build37)
Map Location 80,222,592 - 80,223,557
singlet/doubletsinglet
Overlap geneEdnra
Upstream geneLOC100039211, LOC384847, Nr3c2, Arhgap10, LOC100039235, AI931714, Tmem34
Downstream geneEG622803, Ttc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7, LOC100039466
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349K22.bB6Ng01-349K22.g
ACCGA130603GA130604
length9661,166
definitionB6Ng01-349K22.b B6Ng01-349K22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctattccaggttggatctgctgtattccatttttatggttta
aatacatgaccacatctggcttcccaccaagaagtagttaaaggaaaaaa
gagaacattgatagctttttcatataattatgactattccttggtatgtg
actgtcattggcgatgtttaaagattggctctgacattacggcctgagaa
actgctaattagctttccagatatgatgcactaaagatggatctgtagaa
gcacatggctttgtatcacctgccagtcggaaagaaaaaaatgattcata
tagatcttctaaatgttggcctatttgagatgtaatatcaaaaaatgcat
ccagcactaccatccccagtcttggccagccggaagattagaagattcag
actcagagcttgaaggctgcagtcaggttgcactggccctgaccagtata
accttgttatttcccaaggatacaaataaaacatagaactcattttcaaa
actttaaaaaggtgtaatggtatataacagatccttgactaggagcctaa
aattaataattgaaattttctttcaagtcactataatatttacattttga
tgtgtatagcctactgagttaatttacagtatggtttagctttccctttg
aaagtcataaaatagccttcacacattcaaaacatactgtcttctggctc
catctgggggcattttccaagttctgacaacctgggttctttggggagag
gagaaaacagaggaataagaaactatcacagttggtgggaaggattaaag
agcaactgaggctgggggggtttagggagaggagagtgggctggctaata
ggagtgacgtagtttggaggaacctatgcctatgggacatggaaactaac
atggttaagagcttgcttgagaatttgaaagagtgtctgaatccagtcca
gcattatttgtttgtt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacgggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacacagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcttgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtgggtattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcctgggcctagcaaac
atagaagtgggatgctcacagtcagctaatgggatgggatcacagggctt
ctaaatgggaggagctagagaaagtagccagggagctaaaagggatctca
acctatagtgaacacattatgaactaaccagtaccccgagcttttgactc
tagctgcatattgtattcaaagatgcctagtcgcatcagtggtaaaagag
agtccattgcttgtacaaacttataggtctcagtacatggacgcccagag
gtctcaataaaggcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_80222592_80223557
seq2: B6Ng01-349K22.b_49_1014 (reverse)

seq1  AACAAACAAAATAAATGCTGGGCTGGATTCAGACACTCCTTCAAATTCTC  50
      ||||||||||   |||||||| |||||||||||||||| |||||||||||
seq2  AACAAACAAA--TAATGCTGGACTGGATTCAGACACTCTTTCAAATTCTC  48

seq1  -AGCAAGCTCTTAAACCATGTTAG-TTCCATGTCCCATAGGCATAGGTTC  98
       ||||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  AAGCAAGCTCTT-AACCATGTTAGTTTCCATGTCCCATAGGCATAGGTTC  97

seq1  CTCCAAAACTACGTCACTCCTATTAGCCAGCCCACTCTCCTCTCCCTAAA  148
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCC-AAACTACGTCACTCCTATTAGCCAGCCCACTCTCCTCTCCCTAAA  146

seq1  -CCCCCCAGCCTCAGTTGCTCTTTAATCCTTCCCACCAACTGTGATAGTT  197
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCAGCCTCAGTTGCTCTTTAATCCTTCCCACCAACTGTGATAGTT  196

seq1  TCTTATTCCTCTGTTTTCTCCTCTCCCCAAAGAACCCAGGTTGTCAGAAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTCCTCTGTTTTCTCCTCTCCCCAAAGAACCCAGGTTGTCAGAAC  246

seq1  TTGGAAAATG-CCCCAGATGGAGCCAGAAGACAGTATGTTTTGAATGTGT  296
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAATGCCCCCAGATGGAGCCAGAAGACAGTATGTTTTGAATGTGT  296

seq1  GAAGGCTATTTTATGACTTTCAAAGGGAAAGCTAAACCATACTGTAAATT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTATTTTATGACTTTCAAAGGGAAAGCTAAACCATACTGTAAATT  346

seq1  AACTCAGTAGGCTATACACATCAAAATGTAAATATTATAGTGACTTGAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGTAGGCTATACACATCAAAATGTAAATATTATAGTGACTTGAAA  396

seq1  GAAAATTTCAATTATTAATTTTAGGCTCCTAGTCAAGGATCTGTTATATA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTCAATTATTAATTTTAGGCTCCTAGTCAAGGATCTGTTATATA  446

seq1  CCATTACACCTTTTTAAAGTTTTGAAAATGAGTTCTATGTTTTATTTGTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTACACCTTTTTAAAGTTTTGAAAATGAGTTCTATGTTTTATTTGTA  496

seq1  TCCTTGGGAAATAACAAGGTTATACTGGTCAGGGCCAGTGCAACCTGACT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGGAAATAACAAGGTTATACTGGTCAGGGCCAGTGCAACCTGACT  546

seq1  GCAGCCTTCAAGCTCTGAGTCTGAATCTTCTAATCTTCCGGCTGGCCAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTTCAAGCTCTGAGTCTGAATCTTCTAATCTTCCGGCTGGCCAAG  596

seq1  ACTGGGGATGGTAGTGCTGGATGCATTTTTTGATATTACATCTCAAATAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGATGGTAGTGCTGGATGCATTTTTTGATATTACATCTCAAATAG  646

seq1  GCCAACATTTAGAAGATCTATATGAATCATTTTTTTCTTTCCGACTGGCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACATTTAGAAGATCTATATGAATCATTTTTTTCTTTCCGACTGGCA  696

seq1  GGTGATACAAAGCCATGTGCTTCTACAGATCCATCTTTAGTGCATCATAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATACAAAGCCATGTGCTTCTACAGATCCATCTTTAGTGCATCATAT  746

seq1  CTGGAAAGCTAATTAGCAGTTTCTCAGGCCGTAATGTCAGAGCCAATCTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGCTAATTAGCAGTTTCTCAGGCCGTAATGTCAGAGCCAATCTT  796

seq1  TAAACATCGCCAATGACAGTCACATACCAAGGAATAGTCATAATTATATG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATCGCCAATGACAGTCACATACCAAGGAATAGTCATAATTATATG  846

seq1  AAAAAGCTATCAATGTTCTCTTTTTTCCTTTAACTACTTCTTGGTGGGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCTATCAATGTTCTCTTTTTTCCTTTAACTACTTCTTGGTGGGAA  896

seq1  GCCAGATGTGGTCATGTATTTAAACCATAAAAATGGAATACAGCAGATCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGATGTGGTCATGTATTTAAACCATAAAAATGGAATACAGCAGATCC  946

seq1  AACCTGGAATAGGAGAATTC  966
      ||||||||||||||||||||
seq2  AACCTGGAATAGGAGAATTC  966