BAC Information

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BAC

Clone NameB6Ng01-350M01
Chromosome8 (Build37)
Map Location 99,412,057 - 99,504,427
singlet/doubletdoublet
Overlap genenone
Upstream geneGot2, LOC667445
Downstream geneLOC333331, LOC546090, LOC636859, EG384885
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350M01.bB6Ng01-350M01.g
ACCGA131336GA131337
length1,0091,067
definitionB6Ng01-350M01.b B6Ng01-350M01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,503,423 - 99,504,427)(99,412,057 - 99,413,127)
sequence
gaattcagcaatgatagcgttggtattatatccaattctccatggtaagt
cctatttctccatagtagaacagatgttaggacatgacatttgctcaaag
aacaaaaatctgtattttatatgattaaccaagtactaaataactcatgc
ctagattgtccatggatgaggtgatacttaactgaaccttctaaggaagg
taaaaattaagaggaaattattcctagatggcagagagacaaagaacaat
cactcttttttttaaatcacacattttaagtgtaaagttcaaagaatatt
aaaattcataattaaaaatatggagtatttccgttttagtggctctttgc
ctcaaaactgttcttgtatctattgctccctttaaaagcaactatttatc
tgtccccacagccatgttttgcatgttttcaaacttgttacaagtaaaat
cagataagtataccctcaatgcctgttttcttttgttggaaagatatttt
tagacccattggagctgttttaactggatatggattgcaaaagaaaatcc
attttctaggtatgataatgtgtataagtctttatctactgatggattta
agattttctatgcttttaattattgctaaaaatataacttctggggacaa
gtgtgttgatgaataaaatttcagtatcatggacaataattggaacattc
atattgcttgcttaagatatagttattattgttatcatcattattatttg
ttactagtggtacaaacataataatttatttagccaatatatatgtcgtc
ctgattgactgcaatgggtatgaaatgggatagcatatcttgagttcact
ggagaagacaagcctaatgtttcttagcacattgatcacttctgtttttc
tttataaagtgactattcaaacctgatacctcatgctttggcatcgtttg
tttgcatatttataatttttagaagtggcggctttatcttgggatatcaa
tcttctggg
gaattcatttattttccctgttgaaagaggacatgatgagtcagacttct
gtgggaaaacctccggctatttatgtctcaactaaatacttctcgaatgt
atacatttacttaatcacagtttaagcaattaattcctgtttctaaggat
gagttaagtaaaaaaaaatggtttgatatattttatgatcttactttatt
caactttgagaatgatttattatgtaataataattattaagtaattttgc
ttttaggttgattttgctataatcaaaaaatatttgcttcattaatcagc
tactaacctaagactcatgaaatctgctataatcccatgtaatgcagtgt
tagaagtttctctcattcagatgatgagctattctctatagtgtctatgt
catgaccagctttggtgtttttagtacttagaattggacgtggaggcagg
ttgacattatttgtggcttctgtgttccgagctttgtcaaattcatcatc
agtaggacaacttcaaaatcattatagtttatcattacataattttctcc
agtgtttcattagaatttccacatgttttctcacctatttattagtccat
gacatttaaatgctttccatatttaagtggccattactgaataaaaagca
tacagttggctgagtgaaggaaagataagtggaaatgtgcgtatatcata
cagaaacaattcctgctaacaacttaaacttagttctcagagaccttgga
ggcttttcccactttcaaatttctagatagttcaaaacatgcagttttca
aattggtctggatatgataattttttgacattgaaatggtatgctgatgt
gacactttattacactgaccacactattatcaatactgaaaacgttgaaa
ccatcacttttggaaaattaccaatagagcataacaattatctacagatt
caatgcaatccccatcaaattccacctcattcttcaacgaatttagaaag
ggcaatcagcagattcatctggaataacaaagacgtagatagcaaaaact
ctttctcagataaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_99503423_99504427
seq2: B6Ng01-350M01.b_43_1051 (reverse)

seq1  CCCAAAAGATTTATAT-CCAAAATAAAG-CACCACTTCT-AAAATTAAAA  47
      |||| |||||| |||| |||| |||||| | |||||||| ||||||| ||
seq2  CCCAGAAGATTGATATCCCAAGATAAAGCCGCCACTTCTAAAAATTATAA  50

seq1  ATATGAAAACAAAC-AAGGCAAAGCATGAGGTATCAGGTTTGAATAGTCA  96
      ||||| |||||||| | | |||||||||||||||||||||||||||||||
seq2  ATATGCAAACAAACGATGCCAAAGCATGAGGTATCAGGTTTGAATAGTCA  100

seq1  CTTTATAAAGAAAAAAAGAAGTGATCAATGTGCTTATAAAAATTAGGCTT  146
      ||||||||||||||| |||||||||||||||||| | ||| |||||||||
seq2  CTTTATAAAGAAAAACAGAAGTGATCAATGTGCTAAGAAACATTAGGCTT  150

seq1  GTCTTCTCCAGTTAACTCAAGATATGCTATCCCATTTCATACCCATTGCA  196
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTCCAGTGAACTCAAGATATGCTATCCCATTTCATACCCATTGCA  200

seq1  GTGAATAATGACGACAAATATCTTGGCTAAATAAATTATTATGTTTGTAC  246
      || ||| | ||||||| |||| ||||||||||||||||||||||||||||
seq2  GTCAATCAGGACGACATATATATTGGCTAAATAAATTATTATGTTTGTAC  250

seq1  CACTAGTAACAAATAATAATGATGATAACAATAATAACTATTTCTTAAAC  296
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  CACTAGTAACAAATAATAATGATGATAACAATAATAACTATATCTTAAGC  300

seq1  AAGCAATATGAATGTTCCAATTATTGTCCATGATACTGAAATTTTATTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATATGAATGTTCCAATTATTGTCCATGATACTGAAATTTTATTCA  350

seq1  TCAACACACTTGTCCCCAGAAGTTATATTTTTAGCAATAATTAAAAGCAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACACTTGTCCCCAGAAGTTATATTTTTAGCAATAATTAAAAGCAT  400

seq1  AGAAAATCTTAAATCCATCAGTAGATAAAGACTTATACACATTATCATAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATCTTAAATCCATCAGTAGATAAAGACTTATACACATTATCATAC  450

seq1  CTAGAAAATGGATTTTCTTTTGCAATCCATATCCAGTTAAAACAGCTCCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAATGGATTTTCTTTTGCAATCCATATCCAGTTAAAACAGCTCCA  500

seq1  ATGGGTCTAAAAATATCTTTCCAACAAAAGAAAACAGGCATTGAGGGTAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCTAAAAATATCTTTCCAACAAAAGAAAACAGGCATTGAGGGTAT  550

seq1  ACTTATCTGATTTTACTTGTAACAAGTTTGAAAACATGCAAAACATGGCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATCTGATTTTACTTGTAACAAGTTTGAAAACATGCAAAACATGGCT  600

seq1  GTGGGGACAGATAAATAGTTGCTTTTAAAGGGAGCAATAGATACAAGAAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGACAGATAAATAGTTGCTTTTAAAGGGAGCAATAGATACAAGAAC  650

seq1  AGTTTTGAGGCAAAGAGCCACTAAAACGGAAATACTCCATATTTTTAATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGAGGCAAAGAGCCACTAAAACGGAAATACTCCATATTTTTAATT  700

seq1  ATGAATTTTAATATTCTTTGAACTTTACACTTAAAATGTGTGATTTAAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTTAATATTCTTTGAACTTTACACTTAAAATGTGTGATTTAAAA  750

seq1  AAAAGAGTGATTGTTCTTTGTCTCTCTACCATCTAGGAATAATTTCCTCT  796
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAAAGAGTGATTGTTCTTTGTCTCTCTGCCATCTAGGAATAATTTCCTCT  800

seq1  TAATTTTTACCTTCCTTAGAAGGCTCAGTTAAGTATCACCTCATCTATGG  846
      ||||||||||||||||||||||| ||||||||||||||||||||| ||||
seq2  TAATTTTTACCTTCCTTAGAAGGTTCAGTTAAGTATCACCTCATCCATGG  850

seq1  ACAATCTAGGCATGAGTTATTTAGTACTTGGTTAATCATATAAAATACAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTAGGCATGAGTTATTTAGTACTTGGTTAATCATATAAAATACAG  900

seq1  ATTTTTGTTCTTTGAGCAAATGTCATGTCCTAACATCTGTTCTACTATGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTTCTTTGAGCAAATGTCATGTCCTAACATCTGTTCTACTATGG  950

seq1  AGAAATAGGACTTACCATGGAGAATTGGATATAATATCAATGCTATCATT  996
      |||||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  AGAAATAGGACTTACCATGGAGAATTGGATATAATACCAACGCTATCATT  1000

seq1  GCTGAATTC  1005
      |||||||||
seq2  GCTGAATTC  1009

seq1: chr8_99412057_99413127
seq2: B6Ng01-350M01.g_65_1131

seq1  GAATTCATTTATTTTCACTGTTGAAAGAGGACATGATGAGTCAGACTTCT  50
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATTTTCCCTGTTGAAAGAGGACATGATGAGTCAGACTTCT  50

seq1  GTGGGAAAACCTCCAGCTATTTATGTCTCAACTAAATACTTCTAGAATGT  100
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  GTGGGAAAACCTCCGGCTATTTATGTCTCAACTAAATACTTCTCGAATGT  100

seq1  ATACATTTACTTAATCACAGTTTAAGCAATTAATTCCTGTTTCTAAGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTACTTAATCACAGTTTAAGCAATTAATTCCTGTTTCTAAGGAT  150

seq1  GAGTTAAGTAAAAAAAAATGCTTTGATATATTTTATGATCTTACTTTATT  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAGTTAAGTAAAAAAAAATGGTTTGATATATTTTATGATCTTACTTTATT  200

seq1  CAACTTTGAGAATGATTTATTATGTAATAATAATTATTAAGTAATTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTGAGAATGATTTATTATGTAATAATAATTATTAAGTAATTTTGC  250

seq1  TTTTAGGTTGATTTTGCTATAATCAAAAAATATTTGCTTCATTAATCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGTTGATTTTGCTATAATCAAAAAATATTTGCTTCATTAATCAGC  300

seq1  TACTAACCTAAGACTCATGAAATCTGCTATAATCCCATGTAATGCAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACCTAAGACTCATGAAATCTGCTATAATCCCATGTAATGCAGTGT  350

seq1  TAGAAGTTTCTCTCATTCAGATGATGAGCTATTCTCTATAGTGTCTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTTTCTCTCATTCAGATGATGAGCTATTCTCTATAGTGTCTATGT  400

seq1  CATGACCAGCTTTGGTGTTTTTAGTACTTAGAATTTGACGTGGAGGCAGG  450
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CATGACCAGCTTTGGTGTTTTTAGTACTTAGAATTGGACGTGGAGGCAGG  450

seq1  TTGACATTATTTGTGGCTTCTGTGTTCCGAGCTTTGTCAAATTCATCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTATTTGTGGCTTCTGTGTTCCGAGCTTTGTCAAATTCATCATC  500

seq1  AGTAGGACAACTTCAAAATCATTATAGTTTATCATTACATAATTTTCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGACAACTTCAAAATCATTATAGTTTATCATTACATAATTTTCTCC  550

seq1  AGTGTTTCATTAGAATTTCCACATGTTTTCTCACCTATTTATTAGTCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCATTAGAATTTCCACATGTTTTCTCACCTATTTATTAGTCCAT  600

seq1  GACATTTAAATGCTTTCCATATTTAAGTGGCCATTACTGAATAAAAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTAAATGCTTTCCATATTTAAGTGGCCATTACTGAATAAAAAGCA  650

seq1  TACAGTTGGCTGAGTGAAGGAAAGATAAGTGGAAATGTGCGTATATCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGGCTGAGTGAAGGAAAGATAAGTGGAAATGTGCGTATATCATA  700

seq1  CAGAAACAATTCCTGCTAACAACTTAAACTTAGTTCTCAGAGACCTTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAATTCCTGCTAACAACTTAAACTTAGTTCTCAGAGACCTTGGA  750

seq1  GGCTTTTCCCACTTTCAAATTTCTAAATAGTTCAAAACATGCAGTTTTCA  800
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGCTTTTCCCACTTTCAAATTTCTAGATAGTTCAAAACATGCAGTTTTCA  800

seq1  AATTGGTCTGGATATGATAATTTTTTGACATTGAAATGGTATGCTGATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTCTGGATATGATAATTTTTTGACATTGAAATGGTATGCTGATGT  850

seq1  GACACTTTATTACACTGACCACACTATTATCAATACTGAAAACGTTGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTTATTACACTGACCACACTATTATCAATACTGAAAACGTTGAAA  900

seq1  CCATCACTTTTGGAAAATTACCAATAGAGGCATAACAATTATCTACAGAT  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCATCACTTTTGGAAAATTACCAATAGA-GCATAACAATTATCTACAGAT  949

seq1  TCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAA-TTAGA  999
      ||||||||||||||||| |||||||| ||| ||||||||||||| |||||
seq2  TCAATGCAATCCCCATC-AAATTCCACCTC-ATTCTTCAACGAATTTAGA  997

seq1  AAGGGCAATCAGCAGATTCATCTGGAATAACAAAAACCTAGGATAGCAAA  1049
      |||||||||||||||||||||||||||||||||| || || |||||||||
seq2  AAGGGCAATCAGCAGATTCATCTGGAATAACAAAGACGTA-GATAGCAAA  1046

seq1  AACTC-TTCTCAAGGATAAAAGA  1071
      ||||| ||||||  |||||||||
seq2  AACTCTTTCTCA--GATAAAAGA  1067