MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-350P19
Chromosome	8 (Build37)
Map Location	90,109,987 - 90,244,042
singlet/doublet	doublet
Overlap gene	4933402J07Rik, Zfp423
Upstream gene	Lonp2, Siah1a, ENSMUSG00000074178, BC004022, LOC666960, EG625298, EG330819, Cbln1, LOC100040294
Downstream gene	LOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld
Link	Open Mouse BAC browser

Click to get alignment info.

name	Lonp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66887 MGI:1914137
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Siah1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20437 MGI:108064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000074178 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666945 MGI:3704316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs

name	BC004022 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80750 MGI:2136825
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 142 ESTs, 5 Proteins

name	LOC666960 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	EG625298 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625298 MGI:3647042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1246 ESTs, 6 Proteins

name	EG330819 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330819 MGI:3645880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Cbln1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12404 MGI:88281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040294 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	4933402J07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330820 MGI:3607717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp423 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94187 MGI:1891217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040328 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040328
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	5033428A16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382030 MGI:1921981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Heatr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234549 MGI:2444491
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Papd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214627 MGI:1917820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 162 ESTs, 5 Proteins

name	Adcy7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11513 MGI:102891
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Brd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26992 MGI:1349766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040369 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Nkd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93960 MGI:2135954
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9130017C17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71607 MGI:1918857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nod2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:257632 MGI:2429397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyld (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74256 MGI:1921506
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lonp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981168 GeneID:66887 MGI:1914137
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lon peptidase 2, peroxisomal transcript_id : NM_025827.2

name	Siah1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677946 GeneID:20437 MGI:108064
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : seven in absentia 1A transcript_id : NM_009172.1

name	ENSMUSG00000074178 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258968 GeneID:666945 MGI:3704316
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs product : predicted gene, ENSMUSG00000074178 transcript_id : XM_987158.2

name	BC004022 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383719 GeneID:80750 MGI:2136825
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 142 ESTs, 5 Proteins product : cDNA sequence BC004022, transcript variant 1 transcript_id : XM_894155.2

name	EG625298 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383722 GeneID:625298 MGI:3647042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1246 ESTs, 6 Proteins product : predicted gene, EG625298 transcript_id : XM_889857.2

name	EG330819 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258980 GeneID:330819 MGI:3645880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG330819 transcript_id : XM_898721.3

name	Cbln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133506687 GeneID:12404 MGI:88281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cerebellin 1 precursor protein transcript_id : NM_019626.3

name	LOC100040294 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258969 GeneID:100040294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040294 transcript_id : XM_001474448.1

name	4933402J07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802382 GeneID:330820 MGI:3607717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933402J07 gene transcript_id : NM_177901.3

name	Zfp423 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46359076 GeneID:94187 MGI:1891217
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 423 transcript_id : NM_033327.2

name	LOC100040328 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258971 GeneID:100040328
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100040328 transcript_id : XM_001474508.1

name	5033428A16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343892 GeneID:382030 MGI:1921981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5033428A16 gene transcript_id : NM_029074.2

name	Heatr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40789300 GeneID:234549 MGI:2444491
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HEAT repeat containing 3 transcript_id : NM_172757.3

name	Papd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258973 GeneID:214627 MGI:1917820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 162 ESTs, 5 Proteins product : PAP associated domain containing 5, transcript variant 1 transcript_id : XM_134422.9

name	Adcy7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680645 GeneID:11513 MGI:102891
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 7 transcript_id : NM_007406.1

name	Adcy7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802403 GeneID:11513 MGI:102891
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 7 transcript_id : NM_001037723.2

name	Adcy7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377895 GeneID:11513 MGI:102891
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 7 transcript_id : NM_001037724.2

name	Brd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755233 GeneID:26992 MGI:1349766
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain containing 7 transcript_id : NM_012047.1

name	LOC100040369 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258975 GeneID:100040369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001474559.1

name	Nkd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980621 GeneID:93960 MGI:2135954
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : naked cuticle 1 homolog (Drosophila) transcript_id : NM_027280.2

name	9130017C17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350367 GeneID:71607 MGI:1918857
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9130017C17 gene transcript_id : NM_027840.2

name	Nod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83977453 GeneID:257632 MGI:2429397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleotide-binding oligomerization domain containing 2 transcript_id : NM_145857.2

name	Cyld (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27734059 GeneID:74256 MGI:1921506
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cylindromatosis (turban tumor syndrome) transcript_id : NM_173369.1

name	Lonp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385298 CCDS:CCDS22503.1 GeneID:66887 MGI:1914137
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] codon_start : 1 product : peroxisomal lon protease protein_id : NP_080103.1

name	Siah1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677947 CCDS:CCDS22504.1 GeneID:20437 MGI:108064
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007141 - male meiosis I [Evidence IMP]; GO:0009791 - post-embryonic development [Evidence IMP]; GO:0040014 - regulation of body size [Evidence IMP]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : seven in absentia 1A protein_id : NP_033198.1

name	ENSMUSG00000074178 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383718 GeneID:666945 MGI:3704316
definition	codon_start : 1 product : hypothetical protein protein_id : XP_992252.1

name	BC004022 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383720 GeneID:80750 MGI:2136825
definition	codon_start : 1 product : Nedd4 binding protein 1 isoform 1 protein_id : XP_899248.2

name	EG625298 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918165 GeneID:625298 MGI:3647042
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894950.1

name	EG330819 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918167 GeneID:330819 MGI:3645880
definition	codon_start : 1 product : hypothetical protein protein_id : XP_903814.1

name	Cbln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56744247 CCDS:CCDS22506.1 GeneID:12404 MGI:88281
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045202 - synapse [Evidence IEA]; GO:0019717 - synaptosome [Evidence IEA] codon_start : 1 product : cerebellin 1 precursor protein protein_id : NP_062600.2

name	LOC100040294 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258970 GeneID:100040294
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474498.1

name	4933402J07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244532 GeneID:330820 MGI:3607717
definition	codon_start : 1 product : hypothetical protein LOC330820 protein_id : NP_808569.1

name	Zfp423 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46359077 GeneID:94187 MGI:1891217
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : early B-cell factor associated zinc finger transcription factor; zinc finger protein 104; early B-cell factor associated zinc finger protein product : zinc finger protein 423 protein_id : NP_201584.2

name	LOC100040328 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258972 GeneID:100040328
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474558.1

name	5033428A16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47058954 GeneID:382030 MGI:1921981
definition	codon_start : 1 product : hypothetical protein LOC382030 protein_id : NP_083350.1

name	Heatr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789301 CCDS:CCDS22508.1 GeneID:234549 MGI:2444491
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : HEAT repeat containing 3 protein_id : NP_766345.3

name	Papd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258974 GeneID:214627 MGI:1917820
definition	codon_start : 1 product : similar to PAP-associated domain-containing protein 5 (Topoisomerase-related function protein 4-2) (TRF4-2) isoform 1 protein_id : XP_134422.8

name	Adcy7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83582786 CCDS:CCDS22509.1 GeneID:11513 MGI:102891
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation note : adenylyl cyclase type VII product : adenylate cyclase 7 protein_id : NP_001032812.1

name	Adcy7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83582788 CCDS:CCDS22509.1 GeneID:11513 MGI:102891
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : adenylyl cyclase type VII product : adenylate cyclase 7 protein_id : NP_001032813.1

name	Adcy7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680646 CCDS:CCDS22509.1 GeneID:11513 MGI:102891
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation function : synthesizes cyclic AMP note : adenylyl cyclase type VII product : adenylate cyclase 7 protein_id : NP_031432.1

name	Brd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755234 CCDS:CCDS22510.1 GeneID:26992 MGI:1349766
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IPI] GO_function : GO:0042393 - histone binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : bromodomain-containing protein; protein tyrosine phosphatase, non-receptor type 13 interacting protein; bromodomain protein 75 kDa; bromodomain-containing 7 product : bromodomain containing 7 protein_id : NP_036177.1

name	LOC100040369 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258976 GeneID:100040369
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474609.1

name	Nkd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980622 CCDS:CCDS22511.1 GeneID:93960 MGI:2135954
definition	codon_start : 1 exception : mismatches in translation product : naked cuticle 1 homolog protein_id : NP_081556.2

name	9130017C17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313650 CCDS:CCDS22512.1 GeneID:71607 MGI:1918857
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : selectin ligand interactor cytoplasmic-1 protein_id : NP_082116.1

name	Nod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83977454 GeneID:257632 MGI:2429397
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005829 - cytosol [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0031982 - vesicle [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0050700 - CARD domain binding [Evidence ISS]; GO:0019899 - enzyme binding [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence ISS] [Evidence TAS]; GO:0005515 - protein binding [Evidence IEA]; GO:0019901 - protein kinase binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS] [Evidence IDA]; GO:0001816 - cytokine production [Evidence IMP]; GO:0042742 - defense response to bacterium [Evidence ISS]; GO:0016045 - detection of bacterium [Evidence ISS]; GO:0006954 - inflammatory response [Evidence TAS]; GO:0043123 - positive regulation of I-kappaB kinase/NF-kappaB cascade [Evidence ISS]; GO:0051259 - protein oligomerization [Evidence TAS]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0007165 - signal transduction [Evidence TAS]; GO:0008063 - Toll signaling pathway [Evidence IMP] codon_start : 1 product : caspase recruitment domain family, member 15 protein_id : NP_665856.2

name	Cyld (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734060 CCDS:CCDS22513.1 GeneID:74256 MGI:1921506
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin carboxyl-terminal hydrolase CYLD protein_id : NP_775545.1

name	LOC666960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666960
definition	number : 1 pseudo : _no_value

name	LOC666960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666960
definition	number : 2 pseudo : _no_value

name	LOC666960 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666960
definition	number : 3 pseudo : _no_value

clone name	MSMg01-339J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473K06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-476C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-108J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271C23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101D17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-350P19.b	B6Ng01-350P19.g
ACC	GA131498	GA131499
length	1,097	1,030
definition	B6Ng01-350P19.b	B6Ng01-350P19.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(90,109,987 - 90,111,072)	(90,243,011 - 90,244,042)
sequence	aggaaggtatgtttggcagccggaggttcaggcatcctgagagaatgggc aaacaaggctcccgacaacaactatgaacgcaagctgaagagccttatgg agaagggcatggatcccaagatggagatcagcaagatgctgaagccagag gaggtgctgagctgccggtgagcaccactggggcctctgggcaggcctaa gacagcagtgtgtaaacgtgtacctaaacatggaaaggcaggcctaggtc agtaggctgtgaacacatgcctggacagggaggagggccagcccagcctt acctggctctagctggcaaagaagtgctacaaggccaaagccctgggttt cccagtagtctttactatcagaggctacaagtaatatatttagtcctatt aaaattcccaggatgaacagccaggtgggggcttccattttgagctctgc ctctggaacatcacactttccatttgcttcacaacagaagccgtagagat tcattagaaggaaaagacaggttgtctgtggcctctttctcacaaagaaa actgccctgagttccatcactggtgagctggggcagcagcgtctatattg gttactcttctgttgctatgcaaacaccaccaccaaggcaacttggatga gaaggagattctttgggttttttagttccagaggggtccttccatagtgg taggaaagaacattggtgagctcagaagctgtaggcccagtggcaggaac aagaagctcagagttcatgtcttcaaacacaagcaaactagaagtagggt gagactttctcagtccctccatccccccccccaaataatgcacttcctcc actaagatcactccctcttagacatccccaaacccccaaacagtgccatc aactgaaaggacctagtattcaaatagcagatcctacaggtggccatttc tcacagtgtcactgtccccagtgaccttctgctgtgtttggggttagatt cccaaggaacaactatgaagccaatcaacttactctcttctttttcctca cagtttgggaatgggaaccagggccttgcatggagccaggcatgtta	gtgtgaggaggaaggaggagctggctcaaggacatcagtgttttctacac acactcaggcatacacacacatgcatgcacacacgggcacatgctgcaca taagccctttgcattcatgtgcacacacaagcgtacatacatctgcacct aaacatatacctaagctatagtttacgaaagagaaataagaaaacaaacg ctttgccctgaatgtcacccgtgtattttccccaagtgtcagcttttttt ggtgaatttgctcatctgttttattcaagtgtcgagcagcctgtacccct agaaacacggtgactttatttttattaagttccaagcaggaaggaagcca ggaggcaggagaggcgaaggaggggagcaagatccgggcttggcttccct cagagtagccgcgcaggtctgccttcagcgtgctctgtggacctgcctcg gtttttatccagccattgttcatttctccacggcgtttgcacactgtggc gcgtctggggaatttcagcagttggaatatacatgaaaagagttccgctc cactttcataaggtccctggacggctcggacgaggcctcaaggccccatg gtgaagccggcaacccattcgtattccttccatcaccacacacacggtag cacgaagcccagaccaatcgaaaacttgacagtaagccttttgattttgc ggggaaaccttcatcacgctgcgagagggaagggaatatagcccaaactg gacttcatactgtggcgagcttgaaatcccagccccaccgcagagccggc tgattggaatagttggaaactgtgtccaggaattcggctgcaagaacttg gctcacagcaacttctgcctttttgaaagaaaaattgtcaactgggagag ccacttggggcctgggtttaatctgtccaggcagcaagattcacggaaat gatgggccaagtttcctaaaatgtttcaagctcctgcttatgtggggatt ctgggggcagtgagcaagaagcaagcagca
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr8_90109987_90111072
seq2: B6Ng01-350P19.b_60_1156

seq1  AGGAAGGTATGTTTGGCAGCCGGAGG-GCAGGCATCCTGAGAGAATGGGC  49
      ||||||||||||||||||||||||||  ||||||||||||||||||||||
seq2  AGGAAGGTATGTTTGGCAGCCGGAGGTTCAGGCATCCTGAGAGAATGGGC  50

seq1  AAACAAGGCTCCCGACAACAACTATGAACGCAAGCTGAAGAGCCTTATGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGCTCCCGACAACAACTATGAACGCAAGCTGAAGAGCCTTATGG  100

seq1  AGAAGGGCATGGATCCCAAGATGGAGATCAGCAAGATGCTGAAGCCAGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGCATGGATCCCAAGATGGAGATCAGCAAGATGCTGAAGCCAGAG  150

seq1  GAGGTGCTGAGCTGCCGGTGAGCACCACTGGGGCCTCTGGGCAGGCCTAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGCTGAGCTGCCGGTGAGCACCACTGGGGCCTCTGGGCAGGCCTAA  200

seq1  GACAGCAGTGTGTAAACGTGTACCTAAACATGGAAAGGCAGGCCTAGGTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAGTGTGTAAACGTGTACCTAAACATGGAAAGGCAGGCCTAGGTC  250

seq1  AGTAGGCTGTGAACACATGCCTGGACAGGGAGGAGGGCCAGCCCAGCCTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGCTGTGAACACATGCCTGGACAGGGAGGAGGGCCAGCCCAGCCTT  300

seq1  ACCTGGCTCTAGCTGGCAAAGAAGTGCTACAAGGCCAAAGCCCTGGGTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCTCTAGCTGGCAAAGAAGTGCTACAAGGCCAAAGCCCTGGGTTT  350

seq1  CCCAGTAGTCTTTACTATCAGAGGCTACAAGTAATATATTTAGTCCTATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAGTCTTTACTATCAGAGGCTACAAGTAATATATTTAGTCCTATT  400

seq1  AAAATTCCCAGGATGAACAGCCAGGTGGGGGCTTCCATTTTGAGCTCTGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCCCAGGATGAACAGCCAGGTGGGGGCTTCCATTTTGAGCTCTGC  450

seq1  CTCTGGAACATCACACTTTCCATTTGCTTCACAACAGAAGCCGTAGAGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAACATCACACTTTCCATTTGCTTCACAACAGAAGCCGTAGAGAT  500

seq1  TCATTAGAAGGAAAAGACAGGTTGTCTGTGGCCTCTTTCTCACAAAGAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGAAGGAAAAGACAGGTTGTCTGTGGCCTCTTTCTCACAAAGAAA  550

seq1  ACTGCCCTGAGTTCCATCACTGGTGAGCTGGGGCAGCAGCGTCTATATTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCTGAGTTCCATCACTGGTGAGCTGGGGCAGCAGCGTCTATATTG  600

seq1  GTTACTCTTCTGTTGCTATGCAAACACCACCACCAAGGCAACTTGGATGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCTTCTGTTGCTATGCAAACACCACCACCAAGGCAACTTGGATGA  650

seq1  GAAGGAGATTCTTTGGG-TTTTTAGTTCCAGAGGGGTCCTTCCATAGTGG  698
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAAGGAGATTCTTTGGGTTTTTTAGTTCCAGAGGGGTCCTTCCATAGTGG  700

seq1  TAGGAAAGAACATTGGTGAGCTCAGAAGCTGTAGGCCCAGTGGCAGGAAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAGAACATTGGTGAGCTCAGAAGCTGTAGGCCCAGTGGCAGGAAC  750

seq1  AAGAAGCTCAGAGTTCATGTCTTCAAACACAAGCAAACTAGAAGTAGGGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTCAGAGTTCATGTCTTCAAACACAAGCAAACTAGAAGTAGGGT  800

seq1  GAGACTTTCTCAGTCCCTCCATCCCCCCCCCCAAATAATGCACTTCCTCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTTCTCAGTCCCTCCATCCCCCCCCCCAAATAATGCACTTCCTCC  850

seq1  ACTAAGATCACTCCCTCTTAGACATCCCCAAACCCCCAAACAGTGCCATC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGATCACTCCCTCTTAGACATCCCCAAACCCCCAAACAGTGCCATC  900

seq1  AACTG-AAGGACCTAGTATTCAAATAGCAGATCCTACA-GTGGCCATTTC  946
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  AACTGAAAGGACCTAGTATTCAAATAGCAGATCCTACAGGTGGCCATTTC  950

seq1  TCACAGTGTCACTGTCCCCAGTGACCTTCTGCTGTGTTTGGGGTTTAGAT  996
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCACAGTGTCACTGTCCCCAGTGACCTTCTGCTGTGTTTGGGG-TTAGAT  999

seq1  TCCCAAG--ACAACTATG-AGCC-ATCAACTTACCCTCTTCTTTT--CTC  1040
      |||||||  ||||||||| |||| |||||||||| ||||||||||  |||
seq2  TCCCAAGGAACAACTATGAAGCCAATCAACTTACTCTCTTCTTTTTCCTC  1049

seq1  ACAGTT--GGAATGGAACCCAGGGCCTTGCAT-GAGCCAGGCAATGTTA  1086
      ||||||  ||||||| | |||||||||||||| ||||||||| ||||||
seq2  ACAGTTTGGGAATGGGAACCAGGGCCTTGCATGGAGCCAGGC-ATGTTA  1097

seq1: chr8_90243011_90244042
seq2: B6Ng01-350P19.g_77_1106 (reverse)

seq1  TGCTGCTTGCTTCTTGCTCACTGCCCCCAGAATCCCCACATAAGCAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTTGCTTCTTGCTCACTGCCCCCAGAATCCCCACATAAGCAGGAG  50

seq1  CTTGAAACATTTTAGGAAAACTTGGCCAATCATTTCCGTGAATCTTTGCT  100
      |||||||||||||||| |||||||||| |||||||||||||||| |||||
seq2  CTTGAAACATTTTAGG-AAACTTGGCCCATCATTTCCGTGAATC-TTGCT  98

seq1  GCCTGGACAGATTAAACCCAGGCCCCAAGTGGCTCTCCCAGTTGACAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGACAGATTAAACCCAGGCCCCAAGTGGCTCTCCCAGTTGACAATT  148

seq1  TTTCTTTCAAAAAGGCAGAAGTTGCTGTGAGCCAAGTTCTTGCAGCCGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCAAAAAGGCAGAAGTTGCTGTGAGCCAAGTTCTTGCAGCCGAA  198

seq1  TTCCTGGACACAGTTTCCAACTATTCCAATCAGCCGGCTCTGCGGTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGACACAGTTTCCAACTATTCCAATCAGCCGGCTCTGCGGTGGGG  248

seq1  CTGGGATTTCAAGCTCGCCACAGTATGAAGTCCAGTTTGGGCTATATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTTCAAGCTCGCCACAGTATGAAGTCCAGTTTGGGCTATATTCC  298

seq1  CTTCCCTCTCGCAGCGTGATGAAGGTTTCCCCGCAAAATCAAAAGGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTCTCGCAGCGTGATGAAGGTTTCCCCGCAAAATCAAAAGGCTTA  348

seq1  CTGTCAAGTTTTCGATTGGTCTGGGCTTCGTGCTACCGTGTGTGTGGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAAGTTTTCGATTGGTCTGGGCTTCGTGCTACCGTGTGTGTGGTGA  398

seq1  TGGAAGGAATACGAATGGGTTGCCGGCTTCACCATGGGGCCTTGAGGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGAATACGAATGGGTTGCCGGCTTCACCATGGGGCCTTGAGGCCT  448

seq1  CGTCCGAGCCGTCCAGGGACCTTATGAAAGTGGAGCGGAACTCTTTTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCGAGCCGTCCAGGGACCTTATGAAAGTGGAGCGGAACTCTTTTCAT  498

seq1  GTATATTCCAACTGCTGAAATTCCCCAGACGCGCCACAGTGTGCAAACGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTCCAACTGCTGAAATTCCCCAGACGCGCCACAGTGTGCAAACGC  548

seq1  CGTGGAGAAATGAACAATGGCTGGATAAAAACCGAGGCAGGTCCACAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGAGAAATGAACAATGGCTGGATAAAAACCGAGGCAGGTCCACAGAG  598

seq1  CACGCTGAAGGCAGACCTGCGCGGCTACTCTGAGGGAAGCCAAGCCCGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTGAAGGCAGACCTGCGCGGCTACTCTGAGGGAAGCCAAGCCCGGA  648

seq1  TCTTGCTCCCCTCCTTCGCCTCTCCTGCCTCCTGGCTTCCTTCCTGCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTCCCCTCCTTCGCCTCTCCTGCCTCCTGGCTTCCTTCCTGCTTG  698

seq1  GAACTTAATAAAAATAAAGTCACCGTGTTTCTAGGGGTACAGGCTGCTCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTAATAAAAATAAAGTCACCGTGTTTCTAGGGGTACAGGCTGCTCG  748

seq1  ACACTTGAATAAAACAGATGAGCAAATTCACCAAAAAAAGCTGACACTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGAATAAAACAGATGAGCAAATTCACCAAAAAAAGCTGACACTTG  798

seq1  GGGAAAATACACGGGTGACATTCAGGGCAAAGCGTTTGTTTTCTTATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAATACACGGGTGACATTCAGGGCAAAGCGTTTGTTTTCTTATTTC  848

seq1  TCTTTCGTAAACTATAGCTTAGGTATATGTTTAGGTGCAGATGTATGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCGTAAACTATAGCTTAGGTATATGTTTAGGTGCAGATGTATGTAC  898

seq1  GCTTGTGTGTGCACATGAATGCAAAGGGCTTATGTGCAGCATGTGCCCGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGTGTGCACATGAATGCAAAGGGCTTATGTGCAGCATGTGCCCGT  948

seq1  GTGTGCATGCATGTGTGTGTATGCCTGAGTGTGTGTAGAAAACACTGATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATGCATGTGTGTGTATGCCTGAGTGTGTGTAGAAAACACTGATG  998

seq1  TCCTTGAGCCAGCTCCTCCTTCCTCCTCACAC  1032
      ||||||||||||||||||||||||||||||||
seq2  TCCTTGAGCCAGCTCCTCCTTCCTCCTCACAC  1030

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information