Query= MSMg01no045_j09.b1 MSMg01no045_j09.b1 CHROMAT_FILE:
MSMg01no045_j09.b1 PHD_FILE: MSMg01no045_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:34 2005
(651 letters)
>mm_chr8_6577806_6578856
Length = 1051
Score = 1185 bits (613), Expect = 0.0
Identities = 640/651 (98%), Gaps = 5/651 (0%)
Strand = Plus / Minus
Query: 6 gaattctttgc-acatagtggagcggaaacaaagcaacataatccagctgaaacaaagga 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gaattctttgcaacatagtggagcggaaacaaagcaacataatccagctgaaacaaaggc 751
Query: 65 tgggtctctgggctttccctatataaatacagtgctaaacattaaactttgcgccttgat 124
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 750 tgggtctctgggctttccctatataaatacagtgctaaacgttaaactttgagccttgat 691
Query: 125 cagaaaaccttgtcttgcttcacccttctttcgcagccctgtcccttttcatttccagcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 cagaaaaccttgtcttgcttcacccttctttcgcagccctgtcccttttcatttccagcc 631
Query: 185 ttcctttcatatacccagttcatccctggctgctggacaggttcatatcccttttgggca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ttcctttcatatacccagttcatccctggctgctggacaggttcatatcccttttgggca 571
Query: 245 accttagtaatcttgaggtaatctatatagtctagtcaataataaaaagccctctcactg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 accttagtaatcttgaggtaatctatatagtctagtcaataataaaaagccctctcactg 511
Query: 305 cctttcaaatgttccagttaacaacattccatgacttaccttttacctgtctagctgcat 364
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 510 cctttcaagtgttccagttaacaacattccatggcttaccttttacctgtctagctgcat 451
Query: 365 gtcttttattacagaaagactaagttaagg----tttatttatttatttatttaagtgtc 420
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 450 gtcttttattacagaaagactaagttaaggtttatttatttatttatttatttaagtgtc 391
Query: 421 aagacagtaaaaccacaggtttgggcatattgacttgtaaatataaggccattaagtgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aagacagtaaaaccacaggtttgggcatattgacttgtaaatataaggccattaagtgaa 331
Query: 481 gccaatgtctttggaaccagaacctttgaaccgagtcctaaacttgctaaatgtggcttt 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 330 gccaatgtctttggaaccagaacccttgaaccgagtcctaaacttgctaaatgtggcttt 271
Query: 541 tgtaaactgctggagggaacacctgacttaatgctgggctttccatcatcagcaccttta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgtaaactgctggagggaacacctgacttaatgctgggctttccatcatcagcaccttta 211
Query: 601 tctgtagttagcaaactttggcaagactgaatcagaatttgaaacaatttt 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tctgtagttagcaaactttggcaagactgaatcagaatttgaaacaatttt 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_j09.g1 MSMg01no045_j09.g1 CHROMAT_FILE:
MSMg01no045_j09.g1 PHD_FILE: MSMg01no045_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:34 2005
(622 letters)
>mm_chr8_6412098_6413119
Length = 1022
Score = 1203 bits (622), Expect = 0.0
Identities = 622/622 (100%)
Strand = Plus / Plus
Query: 1 agtattgaacaattgaacatctcattgcattacaataaaataaatacaacatatctaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtattgaacaattgaacatctcattgcattacaataaaataaatacaacatatctaatt 260
Query: 61 tttattcactctaccagaggtcagacactttgttgacaacataaaaactcagaagttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttattcactctaccagaggtcagacactttgttgacaacataaaaactcagaagttatt 320
Query: 121 tctgaaatactttccaattaaaattatgtaaaaatgttaattgcaagggcatgtaaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgaaatactttccaattaaaattatgtaaaaatgttaattgcaagggcatgtaaatag 380
Query: 181 catcaattggttagagaaccatctatactgggtcagctaaggtgtctagcacactaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcaattggttagagaaccatctatactgggtcagctaaggtgtctagcacactaggga 440
Query: 241 aaacaatcagatatgttctgtggaaggatttctttttatccatgtatcttcccatgcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacaatcagatatgttctgtggaaggatttctttttatccatgtatcttcccatgcatg 500
Query: 301 tcgggtaggtactgcgttctcctcaatctgtagctatatcagagttcatgttctagctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcgggtaggtactgcgttctcctcaatctgtagctatatcagagttcatgttctagctga 560
Query: 361 gactctggtattcatccactcattgtggtgacaaaagtaagagtgtgaaggcaaatgcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gactctggtattcatccactcattgtggtgacaaaagtaagagtgtgaaggcaaatgcca 620
Query: 421 gagcccctacatactctgcatctcagcatgtggcatgtaagtccaatctcacaaaaacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagcccctacatactctgcatctcagcatgtggcatgtaagtccaatctcacaaaaacta 680
Query: 481 tcacatgccctagtaacttaccttatccatttaaacactcagactaggtcaaaatccaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcacatgccctagtaacttaccttatccatttaaacactcagactaggtcaaaatccaag 740
Query: 541 gcaaattttggttttcatgatgtggtaacacagtgttcatagataatcctaacaaaagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcaaattttggttttcatgatgtggtaacacagtgttcatagataatcctaacaaaagaa 800
Query: 601 gtgagaaatgaaagctagcatt 622
||||||||||||||||||||||
Sbjct: 801 gtgagaaatgaaagctagcatt 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
