CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACATCTGAGGACAGTGTAGTCAAGGGACCAGACAAGAATAAGTAA
AAGGAAGGAAGGAGACAATGACTCAGCCTGGCTTTTTCTCAGTAAAAGAA
GATCTTATGGGATGGATCCCCAGGTGGGGCAGTCTCTGAATGGTCCTTCC
TTCAGTCTCAGTTCTGAACTCTGTCTCTGTAACTCCTTCCATGGATATTT
TGTTCCCCCTTCTGAAGGAACTAAGTATCCACACTTCTTCTTCTTGAGTT
TTATGATTTCTGCAAAATTGTATATTGGGTATTCTAAACTATTGCAACAA
GATTTTGCTGACAGGACCCTGATATAGCAGTCTCCTGTGAGGCTATGTCA
GTGCCTGGTAAATACAGAAGTGGATGCTCACAGTCATCTATTGGATGGAA
CACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTACCTAAGAAGCTGAAGG
AGTCTGCAGCCCTATAGGAGAAACAACAATATGAACTAACCAGTACCCCC
CAGAGCTCGTGTCTCTAGTGGCATACGTAGCAGAGGATGGCCTAATCGGC
CATCAGTAGTAGGAGAGGTCCTTGATCTTGCGAAGATTCTAGGCCCCAGT
ATAGGGGAATGCCAGGGCCAGGAAGTGTGAGTAGGAGAGTTGGGGAGCAC
GGAAAGTTGTATTCCCATCTGCATATG

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTCCGGAGGGTGGTCATACCT
CGTGCCCCACGTCTGGCACCACTTGACCCATCCAGCAGGTCCAGTTATTT
GAGGATCTCGAGGGGACCTTCTCCTAAGAACCAAATGGGGGGAGGGAGAG
ACAAGAACCAAGTGCAGTGAGTGACACATGGAAGCAGTCTGATTAGCATC
AAGGTGTCACTGTATTCAGCAAGGCTCAAGGCTTAAATGCACAAGCAAAA
GGGGAAGTACTTCTCAGCAGGAGGGATGGGACAGCGGAAATTTTTCTTTT
GGTGACTACACGGGGAAGGAACTTGGTGGTATCAGGGTACATCTTTTGGT
CAAGACATCCAGCACTGACTTAGGGCTAGAATATTCTGTGGTTGTTCTCG
GAACGGCGTCGGTAGCCCACTTTTGACCCCCTTTTCTTCTTGGCGGGGAG
AAGCCCAATTCAGAAATCAGGACAATTGTGTTGTCTTAATAGCTCCCAAC
AGGTGTTAGGTAATATTTTTCATTTCTTTATGTACTTTAAAAACAGACAA
AAGGGGGCTTGAAGAGATGGCTCAGCAGTTAAGGACACTAACTGTTTCTT
CCAGAGGTCCCAAGGTTCATTTCCCAGCATCCCCAAGGGGGGGCTTTATG
ACCCTTGGTAATAAAAAAGGGCCGGGC

Query= MSMg01no047_h05.b1 MSMg01no047_h05.b1 CHROMAT_FILE:
MSMg01no047_h05.b1 PHD_FILE: MSMg01no047_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:48 2005
         (592 letters)



>mm_chr8_105195482_105196472
          Length = 991

 Score =  806 bits (417), Expect = 0.0
 Identities = 550/599 (91%), Gaps = 15/599 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacatctgaggacagtgtagtcaagggaccagacaagaataagtaaaaggaagga 64
           ||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatctgaggatagcgcagtcaagggaccagacaagaataagtaaaaggaagga 264

                                                                       
Query: 65  aggagacaatgactcagcctggctttttctcagtaaaagaagatcttatgggatggatcc 124
           |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 265 aggagacaatgattcagcctgg-tttttctcagtaaaagaagattttatgggatggatcc 323

                                                                       
Query: 125 ccaggtggggcagtctctgaatggtccttccttcagtctcagtt-ctgaactctgtctct 183
           || ||||||||||||||| ||||||||||||||||||||||||| | ||||| |||||||
Sbjct: 324 ccgggtggggcagtctctaaatggtccttccttcagtctcagttgc-gaactttgtctct 382

                                                                       
Query: 184 gtaactccttccatggatattttgttcccccttct--gaaggaactaagtatccaca--- 238
           ||||||||||||| || ||||||||||||||| ||  |||||||| |||||||||||   
Sbjct: 383 gtaactccttccaagggtattttgttccccctgctaagaaggaacgaagtatccacactt 442

                                                                       
Query: 239 ----cttc-ttcttcttgagttttatgatttctgcaaaattgtatattgggtattctaaa 293
               |||| |||||||||||||| |||| |||||| ||||||||| ||||| ||||||||
Sbjct: 443 tggtcttcgttcttcttgagtttcatgagttctgc-aaattgtatcttggggattctaaa 501

                                                                       
Query: 294 ctattgcaacaagattttgctgacaggaccctgatatagcagtctcctgtgaggctatgt 353
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| 
Sbjct: 502 ctattgcaacaagattttgctgacaggaccctgatatagctgtctcctgtgaggctatgc 561

                                                                       
Query: 354 cagtgcctggtaaatacagaagtggatgctcacagtcatctattggatggaacacagggt 413
           |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 562 cagtccctggtaaatacagaagtgaatgctcacagtcatctattggatggaacacagggt 621

                                                                       
Query: 414 ccccaatgaaggagctagagaaagtacctaagaagctgaaggagtctgcagccctatagg 473
           ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||
Sbjct: 622 ccccaatgaaggagctagagaaattacccaagaagctgaaggggtctgcagccctatagg 681

                                                                       
Query: 474 agaaacaacaatatgaactaaccagtaccccccagagctcgtgtctctagtggcatacgt 533
           |||||||||||| ||||||||||||||||||| |||||| ||||||||||  ||||| ||
Sbjct: 682 agaaacaacaatgtgaactaaccagtaccccc-agagcttgtgtctctagcagcatatgt 740

                                                                      
Query: 534 agcagaggatggcctaatcggccatcagtagtaggagaggtccttgatcttgcgaagat 592
           |||||||||||||||| |||| ||||||||| |||||||| ||| ||||||| ||||||
Sbjct: 741 agcagaggatggcctagtcggtcatcagtaggaggagaggccctggatcttgtgaagat 799


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 991
Length adjustment: 10
Effective length of query: 582
Effective length of database: 981
Effective search space:   570942
Effective search space used:   570942
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)