MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-048L12
Chromosome	8 (Build37)
Map Location	95,183,251 - 95,183,621
singlet/doublet	singlet
Overlap gene	none
Upstream gene	AJ237917, LOC674324, LOC100040628, Irx3, 4933436C20Rik, Irx5
Downstream gene	Irx6, LOC100041325, Mmp2, Aytl1, Capns2, LOC100040752, Slc6a2, EG244595, LOC382044, Es1, LOC676523, Ces3, Es22, AU018778, Ces1, 2310039D24Rik, Ces7
Link	Open Mouse BAC browser

Click to get alignment info.

name	AJ237917 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26383 MGI:1347093
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC674324 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 13 Proteins pseudo : _no_value

name	LOC100040628 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040628
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Irx3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16373 MGI:1197522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933436C20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71296 MGI:1918546
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Irx5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54352 MGI:1859086
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Irx6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64379 MGI:1927642
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041325 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 129 mRNAs, 3885 ESTs, 25 Proteins

name	Mmp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17390 MGI:97009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aytl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270084 MGI:3606214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Capns2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69543 MGI:1916793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 7 Proteins

name	LOC100040752 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Slc6a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20538 MGI:1270850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG244595 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244595 MGI:3648919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC382044 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382044
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Es1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13884 MGI:95420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC676523 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676523
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ces3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104158 MGI:2148202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Es22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13897 MGI:95432
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AU018778 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234564 MGI:2142687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ces1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12623 MGI:88378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310039D24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75704 MGI:1922954
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 4 Proteins

name	Ces7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67935 MGI:1915185
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AJ237917 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753915 GeneID:26383 MGI:1347093
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence AJ237917 transcript_id : NM_011936.1

name	Irx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55741684 GeneID:16373 MGI:1197522
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Iroquois related homeobox 3 (Drosophila) transcript_id : NM_008393.2

name	4933436C20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383738 GeneID:71296 MGI:1918546
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 4933436C20 gene transcript_id : XM_988922.1

name	Irx5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476078 GeneID:54352 MGI:1859086
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Iroquois related homeobox 5 (Drosophila) transcript_id : NM_018826.2

name	Irx6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68448552 GeneID:64379 MGI:1927642
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Iroquois related homeobox 6 (Drosophila) transcript_id : NM_022428.2

name	LOC100041325 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259003 GeneID:100041325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 109 mRNAs, 2417 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001476943.1

name	LOC100041325 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259005 GeneID:100041325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 108 mRNAs, 2419 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001476958.1

name	LOC100041325 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259007 GeneID:100041325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 128 mRNAs, 3883 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 3 transcript_id : XM_001476972.1

name	Mmp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47271505 GeneID:17390 MGI:97009
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 2 transcript_id : NM_008610.2

name	Aytl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27370521 GeneID:270084 MGI:3606214
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyltransferase like 1 transcript_id : NM_173014.1

name	Capns2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383721 GeneID:69543 MGI:1916793
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 7 Proteins product : calpain, small subunit 2 transcript_id : XM_894405.2

name	Slc6a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543742 GeneID:20538 MGI:1270850
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2 transcript_id : NM_009209.2

name	EG244595 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701457 GeneID:244595 MGI:3648919
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG244595 transcript_id : NM_001013764.1

name	LOC382044 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:124487012 GeneID:382044
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : liver carboxylesterase N-like transcript_id : NM_001081372.1

name	Es1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348402 GeneID:13884 MGI:95420
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : esterase 1 transcript_id : NM_007954.2

name	Ces3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117553603 GeneID:104158 MGI:2148202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxylesterase 3 transcript_id : NM_053200.2

name	Es22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526803 GeneID:13897 MGI:95432
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : esterase 22 transcript_id : NM_133660.1

name	AU018778 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450338 GeneID:234564 MGI:2142687
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU018778 transcript_id : NM_144930.1

name	Ces1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370214 GeneID:12623 MGI:88378
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxylesterase 1 transcript_id : NM_021456.2

name	2310039D24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259016 GeneID:75704 MGI:1922954
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 4 Proteins product : RIKEN cDNA 2310039D24 gene transcript_id : XM_134476.6

name	Ces7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51556220 GeneID:67935 MGI:1915185
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxylesterase 7 transcript_id : NM_001003951.1

name	AJ237917 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753916 CCDS:CCDS22521.1 GeneID:26383 MGI:1347093
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : similar to FTO protein_id : NP_036066.1

name	Irx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55741685 GeneID:16373 MGI:1197522
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : Iroquois related homeobox 3 protein_id : NP_032419.2

name	4933436C20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383739 GeneID:71296 MGI:1918546
definition	codon_start : 1 product : hypothetical protein LOC71296 protein_id : XP_994016.1

name	Irx5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055250 CCDS:CCDS22522.1 GeneID:54352 MGI:1859086
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0048468 - cell development [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : Iroquois related homeobox 5 protein_id : NP_061296.1

name	Irx6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68448553 GeneID:64379 MGI:1927642
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Iroquois related homeobox 6 protein_id : NP_071873.2

name	LOC100041325 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259004 GeneID:100041325
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001476993.1

name	LOC100041325 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259006 GeneID:100041325
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001477008.1

name	LOC100041325 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259008 GeneID:100041325
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 3 protein_id : XP_001477022.1

name	Mmp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678902 CCDS:CCDS22523.1 GeneID:17390 MGI:97009
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004228 - gelatinase A activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001955 - blood vessel maturation [Evidence IGI]; GO:0030574 - collagen catabolism [Evidence IEA]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : gelatinase A; 72kD gelatinase; 72kD type IV collagenase; 72kDa gelatinase; 72kDa type IV collagenase; matrix metalloproteinase-2 product : matrix metalloproteinase 2 protein_id : NP_032636.1

name	Aytl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370522 CCDS:CCDS22524.1 GeneID:270084 MGI:3606214
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA]; GO:0008654 - phospholipid biosynthesis [Evidence IEA] codon_start : 1 product : acyltransferase like 1 protein_id : NP_766602.1

name	Capns2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918151 GeneID:69543 MGI:1916793
definition	codon_start : 1 product : calpain small subunit 2 protein_id : XP_899498.1

name	Slc6a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543743 CCDS:CCDS22525.1 GeneID:20538 MGI:1270850
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008504 - monoamine transporter activity [Evidence ISS]; GO:0005328 - neurotransmitter:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0015844 - monoamine transport [Evidence ISS]; GO:0006836 - neurotransmitter transport [Evidence IDA]; GO:0048265 - response to pain [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : NE transporter; norepinephrine transporter product : solute carrier family 6 member 2 protein_id : NP_033235.2

name	EG244595 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701458 CCDS:CCDS22526.1 GeneID:244595 MGI:3648919
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC244595 protein_id : NP_001013786.1

name	LOC382044 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:124487013 GeneID:382044
definition	codon_start : 1 product : liver carboxylesterase N-like protein_id : NP_001074841.1

name	Es1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679689 CCDS:CCDS22527.1 GeneID:13884 MGI:95420
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0004091 - carboxylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : esterase 1 protein_id : NP_031980.1

name	Ces3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117553604 CCDS:CCDS22528.1 GeneID:104158 MGI:2148202
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0006637 - acyl-CoA metabolism [Evidence TAS]; GO:0009636 - response to toxin [Evidence TAS] codon_start : 1 product : carboxylesterase 3 protein_id : NP_444430.2

name	Es22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526804 CCDS:CCDS22529.1 GeneID:13897 MGI:95432
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0004091 - carboxylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] codon_start : 1 product : esterase 22 protein_id : NP_598421.1

name	AU018778 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450339 CCDS:CCDS22530.1 GeneID:234564 MGI:2142687
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0004091 - carboxylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC234564 protein_id : NP_659179.1

name	Ces1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946842 CCDS:CCDS22531.1 GeneID:12623 MGI:88378
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0004091 - carboxylesterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : carboxylesterase 1 protein_id : NP_067431.1

name	2310039D24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259017 GeneID:75704 MGI:1922954
definition	codon_start : 1 product : hypothetical protein LOC75704 protein_id : XP_134476.6

name	Ces7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51556221 GeneID:67935 MGI:1915185
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004759 - serine esterase activity [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : carboxylesterase-like urinary excreted protein product : carboxylesterase 7 protein_id : NP_001003951.1

name	LOC100040628 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040628
definition	number : 1 pseudo : _no_value

name	LOC100040752 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040752
definition	number : 1 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 9 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 8 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 7 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 6 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 5 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 4 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 3 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 2 pseudo : _no_value

name	LOC676523 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676523
definition	number : 1 pseudo : _no_value

name	LOC674324 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258978 GeneID:674324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 13 Proteins product : similar to glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_032032.1

clone name	MSMg01-520K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486M19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-164K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387J05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-146L18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-502J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326P14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-179P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358E05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-368F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092E12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-048L12.T7 (MSMg01no048_l12.b1)	MSMg01-048L12.TJ (MSMg01no048_l12.g1)
ACC	AG278416	AG278417
length	1,281	1,269
length of high quality (start - end)	---	371 (138 - 508)
definition	CHROMAT_FILE: MSMg01no048_l12.b1 PHD_FILE: MSMg01no048_l12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:09:58 2005	CHROMAT_FILE: MSMg01no048_l12.g1 PHD_FILE: MSMg01no048_l12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:09:58 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CATTGGGCGCTATAXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACAA ATATTTATTGACCCCTTAAAATCTGCCAGGAACACACAGAGATCCCCACA GATCCTTTTTAAATGATGACCCAAAATCCAATGTATCATTAACAAACCAC CAATTGGTGTGTATGTGTGTACACATGTACTTCACACATGAACAAGCATG TGTACATACACATACACATACCCGTGTCTGTAACGATAGCTGAATCCCTT GAGAAGATCAGAGGATCTCCTGTCATTCTAATTTACATTTTCTATTATTG AACCGTGCCATTTCCATATACTTTGAAAATATTCATAAGCCCCAATGTTG ATTCTGAATGATAAAGGAACAATGATCAGCTATTTCAGATCGTCTTTTTT TATCTGACCTCAAAAGTCACAAGATATATCTGTACTCAAGGCTGCCCCAT TCCTTTCTGTATTTCAAACTTACACCAAATAACTTTCAATCTCATTCCTA GCATTCTTATATAAGTATCCGATATTCTCCCGCATCCTTTCAATCATCGA TCTTTTCTAAAATTACCTTCTAATGAACATACCCCCTATTCTCCTCGGTT CAAATTCTCTCTCTTTCCTATATCTTATCTTTTTTTTTTGCATCTTACAC ATTCTTTTTTATTCTCTTCTTATATTTTCATTCCTTTTCTTCTTCTATCT TAATATTTTTTTTCTGTTATTCTTTTTTTTCATATACATTTTTTTTCTTT TATTTTCCACTTCTCTTTTTTATTTATTTTTTTTTTTTTTTTAATCACCA TTTTAATTTCTTTATATTTATTACTTTTTCTTTTTTTTTTTTTTTATTTT CTTTTCTTTTCTTTTTTCTTTTTTTTCTTTTTCTTTATTTATTCTTTTTA ACTTTTTTTATTATTTATCTTCTTTCTTTATTTTCTTTCTTTTTTTTCTT TTATTTTTCTTTTTCTTTCTTTTTTTTTTTCTTTTTTCTTCTTTTTCTTT TAGCATTTTTACATCTTTCTTTTTATTATTATTATATACTTTTCTCATTA TTTATAATTCCTTCTCTCTCTTTCTTTAGTTTTCTACTTTTACTATTTTA TTTACATACTTTTTATCTCTCTTTTTTCTTATACTTCTTCCTTCTATCCA TTCTCTTTATATTTACTCTCTTTCTTTATCCCTCTCTTTTTTTCTTTATC TTTATTTTTTTATTCTATTACCCTCTTTTTATTTAATATTCTTTTCTTTT CTTTTTTATTTACCTTTATCACTTCCTTATA	TTTTTTTTCAAGGNAGGCTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXCCTTTTACCAAGACACTGGGCAGAGCATACA ATTTAGAAAGCACTCAAGAAATAGTACCCGGTACTATGACTTTAAAGGCA ATATTCTAGATCATTCTGTTTCCAGTGCTTGATCCTGTATTTGTGAGATG GACTGAAGGAAAATAGACCCTGAGAAACCATTTCTGGTAGGATTTGAGGT CGTTGTATATTTTGAATTTACTTTAGGCTTATGCAGAAACTTGGATTTAA CCAAAATAAAATGTCCAGTATCTGTCATACGATTGTGTTCCATGGGTATT TCAGTTCTTGGCCAATTATTATCACTGCCTTGGTGAGACCCCTTGTGACT AATTTTATTTCTGATTCCTGTACTTACTTCTCTTCCCACGACAGGCAGGC ATACTGGTGACGTATGTGAAATATATAATGTGGTGTGTGTTTTTAATTTA TGTGCATTGCTTTACATTGAACATTTTGCTCCGTTACTCATTTTCCTCGT GCATCATATTATCTTTGCGACCTGTCGTTATTCCTCTTCATATCCCTAAT TTATTGTTCTTTCTTACTCTCTAATTATCTTCGTATTCTCTTTTTACTAT CCTCAAAATATATTTTACTGTTTCCCTTTCTGTTCTCTCTTCTATTCTAT TATGCTATTTATGTTGTCTTTTCTTTTTTTCGTTTATTTTTTTCCTTTTT TTTATTCCTTCTTGTTGCTTCTTTATTAATTTTTTTTCTCTCTTGCTTAC TTATCTTTTTATTTATTATCTTTTCTTTTTCTTATCTTTTTTTTTTTTCT TATTCTTCTTTTTTTTATTTTTTTTTCTATTTTTTTTTTCTTTTCTTCTT TCTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTCTTTTTGCACTTTCCCA TTTATCTTTTCTTTTTTCTTTTCTTTTCTCTTTTCTTTATTTCTATTCTT TTCTTTCTTTATTTATCTTCTTTCTTTCCCTCTTTATTTTTTTTCTTCAT TTTTTCTTCTTTTTTCACTCTTTCCTTTTTCTTATTTTCCATTATTTATT TTCTTTTTTTTTTCTTATTTTATTATTTTATTTTTCTTTTCCTTTCTATT ATTATCATTTTCTTTTCCATTCCTATTTTCATTCCATTTATTCTATTATA TATCTCTTCTTCCTCTACTCTTTTTTACTCATATTTGTATTATACTATTC TCTCTTTTAGTTTATCTTT
quality values	Open. Hide. 12 12 9 8 8 8 8 9 11 10 10 8 8 8 8 8 12 14 24 28 28 28 28 35 28 36 36 47 47 47 47 47 47 43 43 40 43 33 34 24 24 34 36 21 22 10 8 8 15 14 28 28 25 18 13 13 24 15 11 9 10 10 10 12 8 8 12 11 11 10 10 10 10 11 11 12 23 18 28 28 28 28 31 34 38 38 38 36 47 47 39 37 37 37 48 28 28 12 12 12 15 8 8 8 8 8 12 8 10 6 6 8 10 18 24 18 8 6 6 6 6 6 7 8 9 23 25 30 29 22 22 22 24 24 30 21 21 30 32 32 22 25 25 32 32 37 31 25 24 12 8 8 8 8 12 8 15 19 23 22 26 15 17 24 19 13 12 8 8 8 8 10 10 9 9 14 14 15 8 8 8 8 15 17 34 24 21 15 12 16 16 16 21 14 14 17 24 24 26 19 16 16 11 11 11 15 15 14 22 22 29 26 19 28 11 11 11 25 24 32 28 28 20 28 25 28 24 22 15 12 12 12 9 11 11 18 23 21 24 12 12 15 12 19 22 32 27 35 35 24 24 11 11 12 12 19 15 15 24 13 14 12 15 11 11 11 12 24 18 21 21 11 11 12 15 15 15 26 27 30 19 21 13 13 13 23 24 28 25 28 19 17 17 18 20 30 34 25 18 18 13 15 18 23 28 28 12 12 12 16 16 28 24 25 31 19 19 11 11 11 15 23 24 14 12 11 13 19 16 19 28 22 19 13 12 12 12 12 11 11 12 12 12 14 19 24 23 23 14 14 9 10 10 26 34 24 15 15 11 16 10 10 10 10 12 14 11 16 15 14 14 11 15 10 15 9 10 9 9 8 8 8 8 11 12 21 12 12 12 20 12 13 13 12 12 16 16 17 17 13 11 13 15 15 14 14 14 14 30 21 23 14 21 21 12 12 12 15 24 26 24 17 10 13 10 10 7 7 8 8 11 12 8 10 10 8 13 11 11 11 12 12 12 12 13 18 23 23 20 13 13 11 12 13 13 13 15 19 12 12 12 11 11 11 12 16 18 21 21 11 12 12 10 9 9 9 15 16 12 16 12 15 15 12 12 12 11 11 11 11 11 12 12 9 14 14 12 12 11 9 9 12 16 11 11 9 16 15 12 11 12 12 12 11 11 10 11 13 11 11 10 8 13 6 6 8 8 11 11 12 11 11 10 10 8 8 8 8 8 9 13 13 12 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 10 11 9 8 8 8 8 8 10 12 10 14 12 15 11 10 10 8 8 8 8 8 8 8 8 9 8 8 10 10 16 21 15 15 8 8 8 6 6 8 8 10 9 9 9 9 10 10 10 8 8 8 10 10 10 8 8 8 8 6 6 10 8 10 10 11 13 21 19 10 10 8 8 10 8 8 8 8 8 8 8 8 6 6 8 8 9 12 8 8 7 7 8 8 8 9 9 10 9 8 10 6 7 8 8 8 8 6 6 8 6 6 8 8 8 8 8 8 8 8 8 8 8 10 19 12 11 11 12 11 11 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 14 12 10 12 8 10 10 11 8 8 8 8 8 8 12 10 13 13 10 14 11 8 8 6 6 8 8 8 8 8 8 8 8 10 8 10 9 9 8 10 6 6 10 10 9 8 8 10 10 8 8 9 9 11 10 11 10 11 8 8 8 8 8 9 9 9 9 8 8 8 8 8 8 9 17 10 10 10 15 10 10 8 8 8 8 10 10 10 12 11 11 11 11 11 11 16 14 11 8 8 8 8 6 8 8 8 8 8 7 7 8 11 8 8 8 8 8 8 9 9 12 10 10 10 17 11 12 22 21 16 14 14 14 11 10 12 10 10 9 9 8 10 10 8 8 8 9 10 11 11 11 13 10 13 10 10 12 10 10 10 8 8 8 15 15 14 14 15 12 12 12 12 15 17 15 8 8 8 8 8 8 8 10 10 8 8 8 10 10 12 12 12 10 9 10 11 11 9 9 14 10 12 9 7 10 8 9 8 8 6 6 8 8 8 8 10 10 11 12 11 12 15 13 10 9 10 15 9 8 8 10 7 7 8 8 12 15 15 13 11 11 16 11 11 10 8 8 10 14 12 16 10 10 10 15 10 13 8 8 8 10 7 7 6 8 8 10 16 12 19 21 10 10 9 10 9 10 13 13 16 10 11 8 8 6 7 8 8 10 13 9 9 10 10 8 8 8 8 8 8 8 6 8 6 6 8 8 10 10 11 17 15 16 15 16 8 8 6 6 8 8 8 8 6 6 6 8 8 8 10 10 8 6 8 8 8 8 9 10 10 8 8 6 6 8 11 10 10 10 10 10 8 7 6 8 8 8 8 8 8 8 8 8 8 10 8 8 9 9 10 9 9 9 9 10 8 8 10 6 6 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 10 8 14 19 8 6 6 8 8 10 11 10 10 10 8 8 8 8 8 8 8 8 10 20 8 8 8 8 8 8 8 8 8 8 10 10 10 8 8 6 6 8 8 8 6 6 8 6 6 8 8 8 10 10 8 11 6 6 6 6 7 8 8 8 8 8 8 8 8 12 10 8 6 6 8 8 8 8 8 10 10 10 11 8 8 10 18 12 21 10 10 6 6 8 15 15 8 8 6 8 8 8 10 11 10 10 16 8 8 7 8 8 8 8 8 6 6 6 6 6 8 8 8 8 8 8 6 9 8 10 8 8 9 9 9 8 8 8 6 6 8 6 11 11 11 11 15 6 7 7 7 8 15 8 8 6 6 8 8 9 9 10 11 15 16 11 10 8 8 6 8 8 8 10 10 10 11 10 10 9	Open. Hide. 7 7 7 6 6 8 6 6 6 6 6 6 3 0 3 6 6 8 6 6 6 6 9 12 15 9 8 10 8 8 10 9 19 19 17 17 11 12 12 30 21 22 9 9 15 23 29 35 37 37 37 37 35 34 34 38 38 53 53 44 44 39 37 47 47 27 19 8 6 6 6 7 10 8 9 9 10 10 10 13 13 19 14 12 12 26 13 13 13 15 10 16 19 23 21 19 24 12 15 11 21 21 32 26 15 14 12 15 10 8 8 8 9 12 10 10 18 21 30 33 26 24 19 14 14 13 18 12 11 11 12 19 16 21 21 25 24 24 25 25 22 30 26 24 20 20 18 25 18 17 17 22 30 40 47 33 43 25 25 25 40 36 43 43 46 42 42 30 24 23 28 28 16 24 18 28 22 29 22 36 36 39 37 37 30 26 22 22 28 32 42 57 43 57 57 59 34 34 27 14 17 18 24 24 30 22 17 17 17 24 24 35 32 44 32 32 32 32 27 43 27 27 12 15 15 24 24 33 27 27 43 43 43 43 36 22 16 21 12 12 12 15 32 38 44 44 21 21 20 38 20 24 24 43 36 35 35 43 43 52 52 52 57 57 57 59 57 52 52 52 52 52 32 32 13 18 18 32 28 42 42 38 27 18 14 18 28 35 23 18 32 32 17 17 18 36 38 43 39 35 35 18 23 23 20 20 35 43 35 43 43 43 43 52 52 43 43 26 26 26 43 43 43 43 43 39 43 32 34 18 19 19 36 36 52 52 52 52 52 62 62 62 43 43 43 44 44 43 43 62 62 62 45 45 45 43 59 43 43 31 43 31 33 39 43 43 39 43 43 52 44 44 43 43 43 43 31 31 31 38 38 35 35 35 43 43 52 52 43 43 43 43 43 43 35 35 20 29 29 17 18 18 20 43 43 62 62 62 62 62 62 62 62 52 62 62 62 62 62 57 57 57 59 43 52 52 57 57 57 59 57 57 57 57 59 59 57 52 52 52 52 52 57 57 43 26 24 11 11 11 24 26 43 38 38 20 20 38 38 57 57 52 52 52 57 57 52 52 52 52 52 57 57 57 59 52 52 43 42 28 28 43 43 33 35 35 35 43 38 38 43 43 52 52 52 43 44 35 35 32 32 18 28 22 27 32 27 15 15 12 12 17 18 12 12 12 19 24 28 20 15 12 12 12 24 18 15 15 14 10 10 9 9 9 11 11 12 15 15 15 15 18 25 19 20 15 19 8 10 12 8 8 8 12 12 21 10 10 10 13 13 10 10 10 19 11 10 8 8 8 8 8 8 8 8 9 8 8 12 22 21 20 20 13 17 11 14 12 12 8 8 6 6 8 8 19 13 15 16 21 21 15 15 15 15 13 15 15 12 10 10 10 10 10 13 12 12 10 10 10 8 8 8 8 8 6 6 8 8 10 11 12 20 22 12 8 8 8 8 8 11 8 8 8 13 10 12 9 10 9 12 12 11 12 11 11 11 11 10 8 8 10 10 10 15 15 11 11 9 9 9 11 11 12 9 9 8 8 8 8 8 11 16 9 9 8 8 6 7 10 10 10 10 8 8 8 8 11 11 11 15 19 10 10 10 10 10 10 10 10 10 11 12 12 12 12 10 10 10 10 10 9 10 10 17 14 12 12 8 8 8 8 11 11 10 8 8 8 8 10 8 8 10 10 8 8 11 13 17 19 16 15 9 9 10 8 8 9 9 9 9 17 16 12 12 10 12 8 8 8 8 10 11 11 10 10 8 8 9 8 12 8 10 20 24 12 8 10 10 10 10 7 6 8 8 10 10 10 11 9 13 8 8 8 8 8 8 8 10 10 11 8 11 10 13 12 7 7 7 7 8 10 12 9 9 11 12 8 8 6 7 8 8 8 8 6 7 8 8 8 11 10 15 22 16 11 10 13 10 10 8 8 8 8 9 11 11 11 11 11 13 13 13 8 10 8 8 8 8 8 8 12 10 10 11 8 8 6 6 8 8 10 10 10 10 10 10 16 11 17 14 12 12 9 9 9 11 12 14 24 20 22 20 17 15 21 21 18 19 26 30 21 18 14 12 11 13 13 11 10 10 8 8 8 6 6 13 11 12 10 12 12 9 9 9 10 10 10 9 8 8 8 6 6 8 6 8 8 8 11 13 15 11 10 8 8 8 8 10 9 9 10 15 10 12 8 8 9 9 13 13 8 8 8 8 8 8 8 8 8 10 8 9 9 9 8 11 8 8 8 8 8 6 6 6 8 8 10 12 17 23 17 11 8 8 7 6 8 8 8 8 8 8 8 10 6 6 8 10 8 8 8 8 6 7 11 8 8 8 8 8 8 9 15 15 15 9 12 18 24 26 21 22 14 15 15 8 8 8 7 8 8 10 8 10 10 12 8 9 9 10 9 12 10 10 10 8 8 8 8 10 11 7 6 8 8 8 10 10 8 8 8 8 7 7 7 8 9 9 9 11 11 11 12 11 12 12 11 9 10 10 12 12 14 14 17 25 22 18 16 15 10 12 15 13 8 8 9 10 11 10 10 8 11 7 7 8 8 13 18 11 10 10 8 8 8 8 15 13 10 9 9 8 11 7 7 8 7 7 8 8 8 8 8 9 9 9 12 9 9 12 13 11 9 12 8 10 6 7 10 8 9 9 10 10 10 15 13 12 10 8 8 8 8 8 8 8 11 8 8 8 8 9 12 11 11 11 8 8 6 6 8 8 7 6 6 6 8 8 8 8 8 8 8 10 10 8 8 8 12 10 10 10 15 12 12 8 8 8 8 8 8 10 12 15 8 9 9 8 8 8 8 8 8 8 8 8 8 6 8 8 10 10 10 10 8 6 6 6 6 6 11 8 7 10 9 9 14 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no048_l12.g1 MSMg01no048_l12.g1 CHROMAT_FILE:
MSMg01no048_l12.g1 PHD_FILE: MSMg01no048_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:09:58 2005
         (371 letters)



>mm_chr8_95183051_95183821
          Length = 771

 Score =  717 bits (371), Expect = 0.0
 Identities = 371/371 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gactttaaaggcaatattctagatcattctgtttccagtgcttgatcctgtatttgtgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gactttaaaggcaatattctagatcattctgtttccagtgcttgatcctgtatttgtgag 512

                                                                       
Query: 61  atggactgaaggaaaatagaccctgagaaaccatttctggtaggatttgaggtcgttgta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atggactgaaggaaaatagaccctgagaaaccatttctggtaggatttgaggtcgttgta 452

                                                                       
Query: 121 tattttgaatttactttaggcttatgcagaaacttggatttaaccaaaataaaatgtcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tattttgaatttactttaggcttatgcagaaacttggatttaaccaaaataaaatgtcca 392

                                                                       
Query: 181 gtatctgtcatacgattgtgttccatgggtatttcagttcttggccaattattatcactg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gtatctgtcatacgattgtgttccatgggtatttcagttcttggccaattattatcactg 332

                                                                       
Query: 241 ccttggtgagaccccttgtgactaattttatttctgattcctgtacttacttctcttccc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ccttggtgagaccccttgtgactaattttatttctgattcctgtacttacttctcttccc 272

                                                                       
Query: 301 acgacaggcaggcatactggtgacgtatgtgaaatatataatgtggtgtgtgtttttaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 acgacaggcaggcatactggtgacgtatgtgaaatatataatgtggtgtgtgtttttaat 212

                      
Query: 361 ttatgtgcatt 371
           |||||||||||
Sbjct: 211 ttatgtgcatt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space:   275844
Effective search space used:   275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information