Query= MSMg01no050_f06.b1 MSMg01no050_f06.b1 CHROMAT_FILE:
MSMg01no050_f06.b1 PHD_FILE: MSMg01no050_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:48:29 2005
(637 letters)
>mm_chr8_40722082_40723118
Length = 1037
Score = 1075 bits (556), Expect = 0.0
Identities = 600/616 (97%), Gaps = 4/616 (0%)
Strand = Plus / Minus
Query: 24 gttttaaccaaaatacttt--aaccaggctcaaacgtccttatattagtgttctgacccc 81
||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |
Sbjct: 1037 gttttaaccaaaata--ttccaaccaggctcaaacgtccttatattagtgttctgacctc 980
Query: 82 ctgaaaggctgaggcgaagataggaaatactcatcttgattatgcaggaagctcgggctg 141
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 cagaaaggctgaggcgaagataggaaatactcatcttgattatgcaggaagctcgggctg 920
Query: 142 tggaagcaggaacataagcctgtctcacactgccaagggaaggctttggggatatatgta 201
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 tggaagcaggaagataagcctgtctcacactgccaagggaaggctttggggatatatgta 860
Query: 202 gtttcaagtcatagcagcacacatgcgcgcacacacacacacacacacacacacacacac 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 gtttcaagtcatagcagcacacatgcgcgcacacacacacacacacacacacacacacac 800
Query: 262 acacacacacacacacctacataaacacacatgggggtgctgtggctgcgtgtgcatgcc 321
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 799 acacacacacacacacctacataaacacacatgggggtgctgtggctgggtgtgcatgcc 740
Query: 322 tatataatatatgtgtatgcatatacacatatgtgtgtgtatgtatatgacctattgaaa 381
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 739 tatataatatatgtgtatgcatatacacatatgtgtgtgtatgtatatgaccaattgaaa 680
Query: 382 cactaagttcttatggggcctgttatgttcatataggctcaaagatgtcagtgaaagact 441
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 679 cactaagttcttatggggcctgttatgttcatatagggtcaaagatgtcagtgaaagact 620
Query: 442 ggaaataaagccaaactcccttagattctgaatcacaaataaacagaaggagctcgacaa 501
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 619 ggaaataaagccaaactcccttagattctgaatcacaaataaacagaaggagctagagaa 560
Query: 502 agtacccccggagctgaagggttttgcagccccctaggcagaacaacaacatgaactaac 561
||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 559 agtacccaaggagctgaagggttttgcagccccataggaagaacaacaacatgaactaac 500
Query: 562 cagtacccacagagctccctgggactaaaccaccaaccaaagaaaactcatggctctagc 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cagtacccacagagctccctgggactaaaccaccaaccaaagaaaactcatggctctagc 440
Query: 622 tgcatatgtagcagac 637
||||||||||||||||
Sbjct: 439 tgcatatgtagcagac 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 20
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no050_f06.g1 MSMg01no050_f06.g1 CHROMAT_FILE:
MSMg01no050_f06.g1 PHD_FILE: MSMg01no050_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:48:29 2005
(501 letters)
>mm_chr8_40559053_40559953
Length = 901
Score = 884 bits (457), Expect = 0.0
Identities = 487/497 (97%), Gaps = 3/497 (0%)
Strand = Plus / Plus
Query: 6 gggactcttgagagacttaacaaatgccagagcctatctaagctgttgcttcccctgctg 65
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 206 gggactcttgagagacttaacaaatgccagagcctatagaagctgttgcttcccctgctg 265
Query: 66 ctgtcctgtattgctgttcgttcctgctgccgcttttgctgttagctgaatttctgcttt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctgtcctgtattgctgttcgttcctgctgccgcttttgctgttagctgaatttctgcttt 325
Query: 126 gctctttgttggtgtcttagttagggttttactgctgaacagacagcatgaccaaggcaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gctctttgttggtgtcttagttagggttttactgctgaacagacagcatgaccaaggcaa 385
Query: 186 gtcttataaaaagcaacgtttaattggggctggcttacaggttcagaggttcagtccatt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gtcttataaaaagcaacgtttaattggggctggcttacaggttcagaggttcagtccatt 445
Query: 246 atcatcaagatgggagcatggcagtatccagcgc-ggcatggcgcaggaggagctgagag 304
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 446 atcatcaagatgggagcatggcagtatccag-gcaggcatggcgcaggaggagctgagag 504
Query: 305 ttctatgtcttcatgcaaagtcggctagtgtaagactgactcccaggcaactagcggtga 364
|||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||
Sbjct: 505 ttctatgtcttcatgcaaagtcggctagtggaagactgacttccaggcaactag-ggtga 563
Query: 365 ggatctgatacccacacccacagtaacacacccattccaaccacgtcacacctattccaa 424
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 564 ggatctgatacccacacccacagtaacacacccattccaaccaggtcacacctattccaa 623
Query: 425 caaggccaccccttcagatggtgccactccctggtcccaggatatacaacccatcacagt 484
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 624 caaggccaccccttcagatggtgccactccctggtccaaggatatacaaaccatcacagt 683
Query: 485 tggattgtttgttggag 501
|||||||||||||||||
Sbjct: 684 tggattgtttgttggag 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
