Query= MSMg01no051_b04.b1 MSMg01no051_b04.b1 CHROMAT_FILE:
MSMg01no051_b04.b1 PHD_FILE: MSMg01no051_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:14 2005
(273 letters)
>mm_chr8_102910011_102910688
Length = 678
Score = 433 bits (224), Expect = e-126
Identities = 261/276 (94%), Gaps = 7/276 (2%)
Strand = Plus / Plus
Query: 1 gggatggagcacccacactctctatggaggagaagggattcctgccccctgtctcatagc 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggatggagcactcacactctctatggaggagaagggattcctgccccctgtctcatagc 260
Query: 61 agcagtaaactcagctatactagtctggaatggg-attaaaaggttaacagaaagtggga 119
|||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 261 agcagtaaactcagctatactagtctggaagggggat-aaaaggttaacagaaagtggga 319
Query: 120 agccactgatacagcttctgtcagttatcacaggtactgagtaggaattttcatgtaaaa 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agccactgatatagcttctgtcagttatcacaggtactgagtaggaattttcatgtaaaa 379
Query: 180 aacaaa-----ctgttcttacattacaattgcaatatccatacatacttctttcgggaat 234
|| ||| |||||||| |||||||||||||||||||||||||||| ||||| |||||
Sbjct: 380 aaaaaaaaaaactgttcttgcattacaattgcaatatccatacatactcctttcaggaat 439
Query: 235 cctaaaaaactcattcatttgaggcagaatcaaaag 270
||||| ||||||||||||||||||||||||||||||
Sbjct: 440 cctaacaaactcattcatttgaggcagaatcaaaag 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 678
Length adjustment: 9
Effective length of query: 264
Effective length of database: 669
Effective search space: 176616
Effective search space used: 176616
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no051_b04.g1 MSMg01no051_b04.g1 CHROMAT_FILE:
MSMg01no051_b04.g1 PHD_FILE: MSMg01no051_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:14 2005
(121 letters)
>mm_chr8_103092262_103092782
Length = 521
Score = 228 bits (118), Expect = 7e-65
Identities = 118/118 (100%)
Strand = Plus / Minus
Query: 1 agatagagctgcggcaaaggaaatggcttgcagagagggcagggcagagcttgccactgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agatagagctgcggcaaaggaaatggcttgcagagagggcagggcagagcttgccactgc 259
Query: 61 tgggtatgctcaaagggaccagcaggtagggaattggggtaaggaggtctcacctgga 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tgggtatgctcaaagggaccagcaggtagggaattggggtaaggaggtctcacctgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 121
Length of database: 521
Length adjustment: 8
Effective length of query: 113
Effective length of database: 513
Effective search space: 57969
Effective search space used: 57969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
