TGCGGCCGCTATACGACTCCTATAGTTCAGAAATCCGCGGAATTCTAAGA
AAGATACCACTTGCCTTCGTATTCAGATGTAGAACCAAAGAAGTTTTCCT
GCAAAGTGCCCACTTCTCTTGCTTTGCAATGATCAAGGGCAAAACTGTGC
ACTTCTGAGTCAGCCTTGAGCACCTAAAGCACTCTTTCATATGTTGACGT
GGTGGAGAACAGGAAAGACATTATGCATCTGGATGTGAAAATCCATGTTT
ATTCTAGGGGAGATGGAATCAGTGCATCCCTGATTAATTTACACTTAAAT
CAATGAAGTGTTTTGCATAAGATATTTGATGTTCAAGAAGCCTTTTAAAA
GAGTCTGATGGGACTTTAAAGCTGTTTTTTTTTTCTCTTAAGAAGGGAAC
TTTTCTTCTCTATGATCTTATGCACAAATGACATAATTTCAAAGTCTCCT
TTCAGAGCTGAATCCTATTGCTTTCAAAAGCTTTCTACTCACATATTTAG
ACGTGGTTAACTTATATTTTGTCATGTCACCATGTTTTTCTCATTATCTA
TCTATGCATCTGTCAGTTTCTCTCTTTGCTTGTCTTTCTATTATTATCTG
TCAACTATCTTTCTATATTTATCTATTTAAACTAATATCATCTATCTATC
ATCATCCCTACCTTTCTAACTGTTGGTCTGCTCTCTGTCATCAATTGATC
AATCTATCATCTATCTATCTATCTATCTATCTA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCCATTCCTTACAACCCCATGGGACAAAAAATAGTTAAACGTG
CTCATCGCACTTTAAAAAATTGGCTTTTTAAGACAAAAGAGGGTCAGCTA
TATCCCCCAAGGTCACCAAAGGCCCACCTTGCCTTCACTTTATTTGTCCT
AAATTTCTTGCACACCGATATCAAGGGCCAATCTGCAGCGGATCGCCACT
GGCATCCAGTTACTTCTAATTCTTATACATTGGTAAAATGGAAGGACCCC
CTGACTAATGAATGGAAGGGTCCAGATCCAGTTCTAATTTGGGGTAGGGG
TTCAGTTTGTGTTTTTTCACGAGATGAAGATGGAGCGCGGTGGCTGCCAG
AGAGATTAATTCGTCAGATGAACACAGATTCTGACTCTTCTGGTAAGTAT
CATTCTAAAGACTAAAATTCCTTTTGTGCTTAAAATTCAGCTGAGAGCAA
TAGCTCTCAAAGCTGTTCTCCAGCTACTCTCTGAGCCAGCTTCCCGACAG
GAGGCCAGAGACTAGCCTCAGTTTTACAATTTGCATTTAAATAAAGTACC
TAGACTTCCCCAAAAGAAGTTCTGCTTTCCTACTTTCTCACTGTCTTTCA
AGATTTTGTCTTTCAAGCAGGTAAATCAACATTCCCGAGGCAGACCAGTA
GATGTGCATCCCCGCCCCCCTAGAG

Query= MSMg01no052_e21.b1 MSMg01no052_e21.b1 CHROMAT_FILE:
MSMg01no052_e21.b1 PHD_FILE: MSMg01no052_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:53 2005
         (655 letters)



>mm_chr8_101952745_101953799
          Length = 1055

 Score = 1189 bits (615), Expect = 0.0
 Identities = 647/663 (97%), Gaps = 12/663 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctaagaaag-ataccacttgccttcgtattcagatgtagaaccaaagaagtttt 62
           ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggaattctaagaaagcatactacttgccttcgtattcagatgtagaaccaaagaagtttt 253

                                                                       
Query: 63  cctg-caaagtgcccacttctcttgctttgcaatgatcaagggcaaaactgtgcacttct 121
           | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 c-tggcaaagtgcccacttctcttgctttgcaatgatcaagggcaaaactgtgcacttct 312

                                                                       
Query: 122 gagtcagccttgagcacctaaagcactctttcatatgttgacgtggtggagaacaggaaa 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gagtcagccttgagcacctaaagcactctttcatatgttgacgtggtggagaacaggaaa 372

                                                                       
Query: 182 gacattatgcatctggatgtgaaaatccatgtttattctaggggagatggaatcagtgca 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gacattatgcatctggatgtgaaaatccatgtttattctaggggagatggaatcagtgca 432

                                                                       
Query: 242 tccctgattaatttacacttaaatcaatgaagtgttttgcataagatatttgatgttcaa 301
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 433 tccctgattaatttacacttaaatcaatgaagtgttttgcaaaagatatttgatgttcaa 492

                                                                       
Query: 302 gaagccttttaaaagagtctgatgggactttaaagctgtttttttttt---------ctc 352
           ||||||||||||||||||||||||||||||||||||||||||||||||         |||
Sbjct: 493 gaagccttttaaaagagtctgatgggactttaaagctgtttttttttttttttttttctc 552

                                                                       
Query: 353 ttaagaagggaacttttcttctctatgatcttatgcacaaatgacataatttcaaagtct 412
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttaagaagggaacttttcttctctatgatcttatgcacaaatgacataatttcaaagtct 612

                                                                       
Query: 413 cctttcagagctgaatcctattgctttcaaaagctttctactcacatatttagacgtggt 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cctttcagagctgaatcctattgctttcaaaagctttctactcacatatttagacgtggt 672

                                                                       
Query: 473 taacttatattttgtcatgtcaccatgtttttctcattatctatctatgcatctgtcagt 532
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 673 taacttatattttgtcatgtcaccatgtttttctcattatctatctatgtatctgtcagt 732

                                                                       
Query: 533 ttctctctttgcttgtctttctattattatctgtcaactatctttctatatttatctatt 592
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 733 ttctctctttgcttgtctttctattattatctatcaactatctttctatatttatctatt 792

                                                                       
Query: 593 taaactaatatcatctatctatcatcatccctacctttctaactgttggtctgctctctg 652
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 taaactaatatcatctatctatcatcatccctacctttctaactgttggtctgctctctg 852

              
Query: 653 tca 655
           |||
Sbjct: 853 tca 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space:   674025
Effective search space used:   674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)