ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCAAAAATCCGCGGAAT
TCAAGACCTAACCACCTATTATCTCACCTCATCTCCTTCCCCCTTCTTAT
TTTCATGAATTATTTGTCGTCCGTTTGTGTGGCATTTTTGTGTGTGTGTG
TGTGTGTTTGTGTATGTGTGTGTGTGTGTGTCTCCACCCACACAAAACAC
ACAACCTCACTANACCACCAACACCACACCAAACAAAACACATACCTCCT
CCAAATAACAACAATACACCCCTTAACCCCACAGAACAAAATCACCACAC
TCCCCCACAAAACAATAACTTTCAACACACACAACACAACAACAACAACC
CCCCAACCACCTAACTCCCACCCCCACCCACACCCACACAGCCACACAAC
CTCCCACACTTCCCTCCACATACACCCCAACACACAACATCCCATCAAAA
CACAAACCCCCCCAAAATCCCTAACACACCCCCCCAATAACACGCCCCCA
CCCCACAACCCAAAACAACCAAAACCCCCCAACACCACCAATCCACACAC
AACAAATCATAAAACCACCATAAAACACCACCACAAAACCCCCCCTAAAA
ACACCCCCCCCCCCAAACCCCCACTCACACTTCCACCCTCCCCACCCCCA
CACCCAATAAACAAACCTCTACCACCCATACCCTCACAAACTTACCACAT
CCCCCCCACCCCCCCTCN

TGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTTATCAGAAGGGTGATTTTTCTTTGTATAT
CTACAACATGGCATATCCTATTGTATCTGAAACTAAAATTCTCATCTTTT
CCCATATGTCTTAAACACATAAGCTGGAGGTTATTACTTATGAAGTATTT
TAAACACTTGTATACATGAAGCAATGCTTTGTACGGTGCGGTTTTTCTGT
TGGGAAACTATTTCTCTAAAAGATTGCAAATTTTAAATTTTCATATTTTG
GATATTCTAATATCTTAATTCAAAGCTATCACTGGCCTTGGATTTTTCTA
CTCAAGAGTTATCTTTCATTATTATTATTTTAATTGCTTTTGTTGTTATT
TATTTATTTTACAAATTAACACTCTATATTTTGTTAGAATTCTCCCAAAA
TGTGTGTATATTTGTCCTCCTTGATTTATTAAGATCCTCTGTGACACAGA
AACTTTGAGTCTTCTGAAATCCTACTTGCAGACTTTTAGTCTTAACTTCT
GAGTTAATAGCGTCCTCTTCAGAGAGTCCTTTTTCCTGTTCTTAATTTTT
GGACATTTCTGCTTATGTATGTGCTACCAGTTTTAATATTTCAAGATTTA
CATTGAGGTCTTTGATCCAATTGAAAATGATTGTTAGC

Query= MSMg01no052_f18.g1 MSMg01no052_f18.g1 CHROMAT_FILE:
MSMg01no052_f18.g1 PHD_FILE: MSMg01no052_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:57 2005
         (619 letters)



>mm_chr8_54027554_54028572
          Length = 1019

 Score =  951 bits (492), Expect = 0.0
 Identities = 504/508 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttatcagaagggtgatttttctttgtatatctacaacatggcatatcctattgtatctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 cttatcagaagggtgatttttctttgtatatctacaacatggcatatcctattgtatctg 449

                                                                       
Query: 61  aaactaaaattctcatcttttcccatatgtcttaaacacataagctggaggttattactt 120
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 448 aaactaaaattctcatcttttcccatatgtcttaagcacataagctggaggttattactt 389

                                                                       
Query: 121 atgaagtattttaaacacttgtatacatgaagcaatgctttgtacggtgcggtttttctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 atgaagtattttaaacacttgtatacatgaagcaatgctttgtacggtgcggtttttctg 329

                                                                       
Query: 181 ttgggaaactatttctctaaaagattgcaaattttaaattttcatattttggatattcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttgggaaactatttctctaaaagattgcaaattttaaattttcatattttggatattcta 269

                                                                       
Query: 241 atatcttaattcaaagctatcactggccttggatttttctactcaagagttatctttcat 300
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 268 atatcttaattcaaagctatcactgaccttggatttttctactcaagagttatctttcat 209

                                                                       
Query: 301 tattattattttaattgcttttgttgttatttatttattttacaaattaacactctatat 360
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 208 tattattattttaattgcttttgttgttatttatttattttaaaaattaacactctatat 149

                                                                       
Query: 361 tttgttagaattctcccaaaatgtgtgtatatttgtcctccttgatttattaagatcctc 420
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tttgtaagaattctcccaaaatgtgtgtatatttgtcctccttgatttattaagatcctc 89

                                                                       
Query: 421 tgtgacacagaaactttgagtcttctgaaatcctacttgcagacttttagtcttaacttc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88  tgtgacacagaaactttgagtcttctgaaatcctacttgcagacttttagtcttaacttc 29

                                       
Query: 481 tgagttaatagcgtcctcttcagagagt 508
           ||||||||||||||||||||||||||||
Sbjct: 28  tgagttaatagcgtcctcttcagagagt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space:   614481
Effective search space used:   614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)