Query= MSMg01no053_n07.b1 MSMg01no053_n07.b1 CHROMAT_FILE:
MSMg01no053_n07.b1 PHD_FILE: MSMg01no053_n07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:51 2005
(234 letters)
>mm_chr8_69159532_69160167
Length = 636
Score = 426 bits (220), Expect = e-124
Identities = 232/236 (98%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 1 ctggaaaa-ataagacaggaaaagaaaagc-gcattattgttgatagtgtgtaacttaga 58
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 ctggaaaagataagacaggaaaagaaaagcagcattattgttgatagtgtgtaacttaga 260
Query: 59 aatacctctattctggctttttgtgtcctcttacttaatcatccttcttgatactattcc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatacctctattctggctttttgtgtcctcttacttaatcatccttcttgatactattcc 320
Query: 119 acactgatttcatcaggacagttcctttttgccatctgttgttttgggtttggaatctgg 178
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaatgatttcatcaggacagttcctttttgccatctgttgttttgggtttggaatctgg 380
Query: 179 ggtttaagcatgaaatttctcaacatagtatgccattcggttatacctccagccca 234
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 ggtttaagcatgaaatttctcaacacagtatgccattcggttatacctccagccca 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 636
Length adjustment: 9
Effective length of query: 225
Effective length of database: 627
Effective search space: 141075
Effective search space used: 141075
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no053_n07.g1 MSMg01no053_n07.g1 CHROMAT_FILE:
MSMg01no053_n07.g1 PHD_FILE: MSMg01no053_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:54:51 2005
(242 letters)
>mm_chr14_62079414_62080055
Length = 642
Score = 445 bits (230), Expect = e-129
Identities = 239/242 (98%)
Strand = Plus / Minus
Query: 1 atgattttctacccaatcccacctgggctcggagtcgttgcgggtctcctcaccctaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atgattttctacccaatcccacctgggctcggagtcgttgcgggtctcctcaccctaatt 383
Query: 61 cagggggagctgagtcaagactacaggggatgccatggctgccttccagaacagaaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cagggggagctgagtcaagactacaggggatgccatggctgccttccagaacagaaggca 323
Query: 121 acttcctctggccttctcaataagcacattctcacctcctctaatgggtgttgcttgcag 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 322 acttcctctggccttctcaacaagcacattctcacctcctctaatgggtgttgcttgcag 263
Query: 181 tcagagtgcaacctcctaaatagcagctttagcatggcacaatctcctcagcacaaccac 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 262 tcagagtgcaacctcctaaatagcagctttagcatggcacaatctccccagcacaagcac 203
Query: 241 cc 242
||
Sbjct: 202 cc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
